RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 PPARGC1BQ86YN6 1023 aaKnown RBP10.49□□□□□ -0.73
TOM1L1-216ENST00000573607 STAG2Q8N3U4 1231 aa10.49□□□□□ -0.73
TOM1L1-216ENST00000573607 FOXD4L4Q8WXT5 416 aaPredicted RBP10.49□□□□□ -0.73
TOM1L1-216ENST00000573607 NGLY1Q96IV0 654 aa10.49□□□□□ -0.73
TOM1L1-216ENST00000573607 GRIP2Q9C0E4 1043 aa10.49□□□□□ -0.73
TOM1L1-216ENST00000573607 HCN4Q9Y3Q4 1203 aa10.49□□□□□ -0.73
TOM1L1-216ENST00000573607 TEAD4Q15561 434 aa10.48□□□□□ -0.73
TOM1L1-216ENST00000573607 SLC27A3Q5K4L6 730 aa10.48□□□□□ -0.73
TOM1L1-216ENST00000573607 TMEM214Q6NUQ4 689 aaKnown RBP10.48□□□□□ -0.73
TOM1L1-216ENST00000573607 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
TOM1L1-216ENST00000573607 POLMQ9NP87 494 aaPredicted RBP10.48□□□□□ -0.73
TOM1L1-216ENST00000573607 ZNF232Q9UNY5 417 aa10.48□□□□□ -0.73
TOM1L1-216ENST00000573607 SERTM1A2A2V5 107 aa10.47□□□□□ -0.73
TOM1L1-216ENST00000573607 RGS20O76081 388 aa10.47□□□□□ -0.73
TOM1L1-216ENST00000573607 FKBP4Q02790 459 aaKnown RBP eCLIP10.47□□□□□ -0.73
TOM1L1-216ENST00000573607 COX20Q5RI15 118 aa10.47□□□□□ -0.73
TOM1L1-216ENST00000573607 GLYCTKQ8IVS8 523 aa10.47□□□□□ -0.73
TOM1L1-216ENST00000573607 HELQQ8TDG4 1101 aa10.47□□□□□ -0.73
TOM1L1-216ENST00000573607 L3MBTL2Q969R5 705 aa10.47□□□□□ -0.73
TOM1L1-216ENST00000573607 LRFN2Q9ULH4 789 aa10.47□□□□□ -0.73
TOM1L1-216ENST00000573607 BMP2P12643 396 aa10.46□□□□□ -0.73
TOM1L1-216ENST00000573607 BMP1P13497 986 aa10.46□□□□□ -0.73
TOM1L1-216ENST00000573607 RNF144AP50876 292 aaPredicted RBP10.46□□□□□ -0.73
TOM1L1-216ENST00000573607 MRPL14Q6P1L8 145 aaKnown RBP10.46□□□□□ -0.73
TOM1L1-216ENST00000573607 C16orf46Q6P387 395 aa10.46□□□□□ -0.73
TOM1L1-216ENST00000573607 POTEAQ6S8J7 498 aa10.46□□□□□ -0.73
TOM1L1-216ENST00000573607 NBPF15Q8N660 670 aa10.46□□□□□ -0.73
TOM1L1-216ENST00000573607 C4orf17Q53FE4 359 aa10.45□□□□□ -0.74
TOM1L1-216ENST00000573607 NOM1Q5C9Z4 860 aaKnown RBP10.45□□□□□ -0.74
TOM1L1-216ENST00000573607 RHBDD1Q8TEB9 315 aa10.45□□□□□ -0.74
TOM1L1-216ENST00000573607 CHMP3Q9Y3E7 222 aa10.45□□□□□ -0.74
TOM1L1-216ENST00000573607 TNFRSF10BO14763 440 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 UPP2O95045 317 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 AVPP01185 164 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 GPC1P35052 558 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 TXLNAP40222 546 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 PHKA2P46019 1235 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 PLA2G4AP47712 749 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 FAM26DQ5JW98 314 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 ALDH16A1Q8IZ83 802 aa10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 NIFKQ9BYG3 293 aaKnown RBP10.44□□□□□ -0.74
TOM1L1-216ENST00000573607 GFRA3O60609 400 aa10.43□□□□□ -0.74
TOM1L1-216ENST00000573607 MPSTP25325 297 aa10.43□□□□□ -0.74
TOM1L1-216ENST00000573607 ARHGAP4P98171 946 aa10.43□□□□□ -0.74
TOM1L1-216ENST00000573607 SF3B2Q13435 895 aaKnown RBP10.43□□□□□ -0.74
TOM1L1-216ENST00000573607 PRICKLE2Q7Z3G6 844 aa10.43□□□□□ -0.74
TOM1L1-216ENST00000573607 TRIM46Q7Z4K8 759 aa10.43□□□□□ -0.74
TOM1L1-216ENST00000573607 PHACTR1Q9C0D0 580 aa10.43□□□□□ -0.74
TOM1L1-216ENST00000573607 GTF2E1P29083 439 aaPredicted RBP10.42□□□□□ -0.74
TOM1L1-216ENST00000573607 POU4F2Q12837 409 aa10.42□□□□□ -0.74
TOM1L1-216ENST00000573607 GNASQ5JWF2 1037 aa10.42□□□□□ -0.74
TOM1L1-216ENST00000573607 RNF217Q8TC41 542 aa10.42□□□□□ -0.74
TOM1L1-216ENST00000573607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.42□□□□□ -0.749e-13■■■■■ 192.3
TOM1L1-216ENST00000573607 HIRAP54198 1017 aaPredicted RBP10.41□□□□□ -0.74
TOM1L1-216ENST00000573607 MARSP56192 900 aaKnown RBP10.41□□□□□ -0.74
TOM1L1-216ENST00000573607 DNAJC14Q6Y2X3 702 aaPredicted RBP10.41□□□□□ -0.74
TOM1L1-216ENST00000573607 KLRG1Q96E93 195 aa10.41□□□□□ -0.74
TOM1L1-216ENST00000573607 FIGNL2A6NMB9 653 aa10.4□□□□□ -0.74
TOM1L1-216ENST00000573607 ZNF428Q96B54 188 aa10.4□□□□□ -0.74
TOM1L1-216ENST00000573607 MYO19Q96H55 970 aa10.4□□□□□ -0.74
TOM1L1-216ENST00000573607 KLK14Q9P0G3 267 aa10.4□□□□□ -0.74
TOM1L1-216ENST00000573607 SPATA31C2B4DYI2 1134 aa10.39□□□□□ -0.75
TOM1L1-216ENST00000573607 ZBTB39O15060 712 aa10.39□□□□□ -0.75
TOM1L1-216ENST00000573607 RHOQP17081 205 aa10.39□□□□□ -0.75
TOM1L1-216ENST00000573607 NPR3P17342 541 aa10.39□□□□□ -0.75
TOM1L1-216ENST00000573607 DGKZQ13574 1117 aa10.39□□□□□ -0.75
TOM1L1-216ENST00000573607 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
TOM1L1-216ENST00000573607 NPM2Q86SE8 214 aaKnown RBP10.39□□□□□ -0.75
TOM1L1-216ENST00000573607 AIDAQ96BJ3 306 aa10.39□□□□□ -0.75
TOM1L1-216ENST00000573607 DGAT1O75907 488 aa10.38□□□□□ -0.75
TOM1L1-216ENST00000573607 NBPF10Q6P3W6 841 aaKnown RBP10.38□□□□□ -0.75
TOM1L1-216ENST00000573607 ZFP42Q96MM3 310 aa10.38□□□□□ -0.75
TOM1L1-216ENST00000573607 STIM2Q9P246 746 aa10.38□□□□□ -0.75
TOM1L1-216ENST00000573607 TTLL8A6PVC2 850 aa10.37□□□□□ -0.75
TOM1L1-216ENST00000573607 NRG2O14511 850 aaPredicted RBP10.37□□□□□ -0.75
TOM1L1-216ENST00000573607 FAM13AO94988 1023 aa10.37□□□□□ -0.75
TOM1L1-216ENST00000573607 RTN1Q16799 776 aa10.37□□□□□ -0.75
TOM1L1-216ENST00000573607 LYSMD3Q7Z3D4 306 aa10.37□□□□□ -0.75
TOM1L1-216ENST00000573607 SOS2Q07890 1332 aaPredicted RBP10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 ST8SIA5O15466 376 aa10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 MAPK1P28482 360 aa10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 SCARF1Q14162 830 aa10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 C11orf91Q3C1V1 193 aa10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 ATCAYQ86WG3 371 aa10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 ETFBKMTQ8IXQ9 262 aa10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 C7orf43Q8WVR3 580 aa10.36□□□□□ -0.75
TOM1L1-216ENST00000573607 AXIN1O15169 862 aa10.35□□□□□ -0.75
TOM1L1-216ENST00000573607 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
TOM1L1-216ENST00000573607 CCDC87Q9NVE4 849 aa10.35□□□□□ -0.75
TOM1L1-216ENST00000573607 DACH1Q9UI36 760 aa10.35□□□□□ -0.75
TOM1L1-216ENST00000573607 DCTN4Q9UJW0 460 aa10.35□□□□□ -0.75
TOM1L1-216ENST00000573607 BCS1LQ9Y276 419 aa10.35□□□□□ -0.75
TOM1L1-216ENST00000573607 BRD2P25440 801 aaKnown RBP10.34□□□□□ -0.75
TOM1L1-216ENST00000573607 C1orf53Q5VUE5 145 aa10.34□□□□□ -0.75
TOM1L1-216ENST00000573607 ANKRD33BA6NCL7 494 aa10.33□□□□□ -0.76
TOM1L1-216ENST00000573607 FZD6O60353 706 aa10.33□□□□□ -0.76
TOM1L1-216ENST00000573607 RHPN1Q8TCX5 695 aa10.33□□□□□ -0.76
TOM1L1-216ENST00000573607 IFT43Q96FT9 208 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms