RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CYP19A1P11511 503 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-213ENST00000573577 RIPK4P57078 832 aa17.79■□□□□ 0.44
RPAIN-213ENST00000573577 INTS5Q6P9B9 1019 aaKnown RBP17.79■□□□□ 0.44
RPAIN-213ENST00000573577 CCDC87Q9NVE4 849 aa17.79■□□□□ 0.44
RPAIN-213ENST00000573577 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
RPAIN-213ENST00000573577 HEG1Q9ULI3 1381 aa17.79■□□□□ 0.44
RPAIN-213ENST00000573577 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
RPAIN-213ENST00000573577 FMNL2Q96PY5 1086 aa17.78■□□□□ 0.44
RPAIN-213ENST00000573577 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
RPAIN-213ENST00000573577 FAM9BQ8IZU0 186 aa17.77■□□□□ 0.44
RPAIN-213ENST00000573577 SYT17Q9BSW7 474 aa17.77■□□□□ 0.44
RPAIN-213ENST00000573577 KCNQ3O43525 872 aa17.76■□□□□ 0.43
RPAIN-213ENST00000573577 RFC4P35249 363 aa17.76■□□□□ 0.43
RPAIN-213ENST00000573577 TAF7Q15545 349 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-213ENST00000573577 NEUROD2Q15784 382 aa17.76■□□□□ 0.43
RPAIN-213ENST00000573577 APAF1O14727 1248 aa17.75■□□□□ 0.43
RPAIN-213ENST00000573577 STARD3NLO95772 234 aa17.75■□□□□ 0.43
RPAIN-213ENST00000573577 TEX13AQ9BXU3 409 aaPredicted RBP17.75■□□□□ 0.43
RPAIN-213ENST00000573577 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
RPAIN-213ENST00000573577 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
RPAIN-213ENST00000573577 ZBTB22O15209 634 aa17.74■□□□□ 0.43
RPAIN-213ENST00000573577 MIER1Q8N108 512 aa17.74■□□□□ 0.43
RPAIN-213ENST00000573577 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
RPAIN-213ENST00000573577 ZBTB1Q9Y2K1 713 aa17.74■□□□□ 0.43
RPAIN-213ENST00000573577 SOS1Q07889 1333 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-213ENST00000573577 KLHL34Q8N239 644 aa17.73■□□□□ 0.43
RPAIN-213ENST00000573577 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
RPAIN-213ENST00000573577 GYS1P13807 737 aa17.72■□□□□ 0.43
RPAIN-213ENST00000573577 USP42Q9H9J4 1324 aaKnown RBP17.72■□□□□ 0.43
RPAIN-213ENST00000573577 COL15A1P39059 1388 aa17.71■□□□□ 0.43
RPAIN-213ENST00000573577 CANXP27824 592 aaKnown RBP17.71■□□□□ 0.43
RPAIN-213ENST00000573577 MIS18AQ9NYP9 233 aa17.71■□□□□ 0.43
RPAIN-213ENST00000573577 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
RPAIN-213ENST00000573577 MMP10P09238 476 aa17.7■□□□□ 0.42
RPAIN-213ENST00000573577 SNRPA1P09661 255 aaKnown RBP17.7■□□□□ 0.42
RPAIN-213ENST00000573577 CALD1Q05682 793 aaKnown RBP17.7■□□□□ 0.42
RPAIN-213ENST00000573577 KDM3BQ7LBC6 1761 aa17.69■□□□□ 0.42
RPAIN-213ENST00000573577 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
RPAIN-213ENST00000573577 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
RPAIN-213ENST00000573577 PRAMEF22A3QJZ6 481 aa17.68■□□□□ 0.42
RPAIN-213ENST00000573577 ZPR1O75312 459 aa17.68■□□□□ 0.42
RPAIN-213ENST00000573577 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
RPAIN-213ENST00000573577 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
RPAIN-213ENST00000573577 BABAM1Q9NWV8 329 aa17.68■□□□□ 0.42
RPAIN-213ENST00000573577 CD2APQ9Y5K6 639 aa17.68■□□□□ 0.42
RPAIN-213ENST00000573577 USP16Q9Y5T5 823 aa17.68■□□□□ 0.42
RPAIN-213ENST00000573577 A1BGP04217 495 aa17.67■□□□□ 0.42
RPAIN-213ENST00000573577 IL6STP40189 918 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-213ENST00000573577 FKBP8Q14318 412 aa17.67■□□□□ 0.42
RPAIN-213ENST00000573577 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
RPAIN-213ENST00000573577 NARFQ9UHQ1 456 aa17.67■□□□□ 0.42
RPAIN-213ENST00000573577 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
RPAIN-213ENST00000573577 USPL1Q5W0Q7 1092 aa17.66■□□□□ 0.42
RPAIN-213ENST00000573577 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
RPAIN-213ENST00000573577 A0A087WZG4 1122 aa17.65■□□□□ 0.42
RPAIN-213ENST00000573577 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
RPAIN-213ENST00000573577 PARP3Q9Y6F1 533 aa17.64■□□□□ 0.41
RPAIN-213ENST00000573577 GIGYF1O75420 1035 aaPredicted RBP17.63■□□□□ 0.41
RPAIN-213ENST00000573577 NPM2Q86SE8 214 aaKnown RBP17.63■□□□□ 0.41
RPAIN-213ENST00000573577 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
RPAIN-213ENST00000573577 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
RPAIN-213ENST00000573577 LAMB4A4D0S4 1761 aa17.63■□□□□ 0.41
RPAIN-213ENST00000573577 PIP4K2AP48426 406 aaPredicted RBP17.62■□□□□ 0.41
RPAIN-213ENST00000573577 DDR1Q08345 913 aa17.62■□□□□ 0.41
RPAIN-213ENST00000573577 WWC1Q8IX03 1113 aa17.62■□□□□ 0.41
RPAIN-213ENST00000573577 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
RPAIN-213ENST00000573577 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
RPAIN-213ENST00000573577 C10orf71Q711Q0 1435 aa17.62■□□□□ 0.41
RPAIN-213ENST00000573577 CHL1O00533 1208 aa17.61■□□□□ 0.41
RPAIN-213ENST00000573577 TM4SF1P30408 202 aa17.61■□□□□ 0.41
RPAIN-213ENST00000573577 GNAI1P63096 354 aa17.61■□□□□ 0.41
RPAIN-213ENST00000573577 IFT57Q9NWB7 429 aa17.61■□□□□ 0.41
RPAIN-213ENST00000573577 TBC1D2BQ9UPU7 963 aa17.61■□□□□ 0.41
RPAIN-213ENST00000573577 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
RPAIN-213ENST00000573577 NBPF26B4DH59 902 aa17.6■□□□□ 0.41
RPAIN-213ENST00000573577 POLRMTO00411 1230 aaKnown RBP17.6■□□□□ 0.41
RPAIN-213ENST00000573577 NFIXQ14938 502 aa17.6■□□□□ 0.41
RPAIN-213ENST00000573577 GPR162Q16538 588 aa17.6■□□□□ 0.41
RPAIN-213ENST00000573577 NBPF10Q6P3W6 841 aaKnown RBP17.6■□□□□ 0.41
RPAIN-213ENST00000573577 NBPF15Q8N660 670 aa17.6■□□□□ 0.41
RPAIN-213ENST00000573577 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
RPAIN-213ENST00000573577 KIF13BQ9NQT8 1826 aa17.59■□□□□ 0.41
RPAIN-213ENST00000573577 DZIP3Q86Y13 1208 aaKnown RBP17.59■□□□□ 0.41
RPAIN-213ENST00000573577 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
RPAIN-213ENST00000573577 GOLGB1Q14789 3259 aaKnown RBP17.58■□□□□ 0.41
RPAIN-213ENST00000573577 IL16Q14005 1332 aa17.58■□□□□ 0.4
RPAIN-213ENST00000573577 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
RPAIN-213ENST00000573577 CAMTA2O94983 1202 aa17.58■□□□□ 0.4
RPAIN-213ENST00000573577 WDR63Q8IWG1 891 aa17.58■□□□□ 0.4
RPAIN-213ENST00000573577 UTRNP46939 3433 aa17.58■□□□□ 0.4
RPAIN-213ENST00000573577 PXDNLA1KZ92 1463 aa17.57■□□□□ 0.4
RPAIN-213ENST00000573577 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
RPAIN-213ENST00000573577 YBX3P16989 372 aaKnown RBP eCLIP17.56■□□□□ 0.41e-7■□□□□ 10.3
RPAIN-213ENST00000573577 TGFB2P61812 414 aa17.56■□□□□ 0.4
RPAIN-213ENST00000573577 TBC1D9BQ66K14 1250 aa17.56■□□□□ 0.4
RPAIN-213ENST00000573577 MBIPQ9NS73 344 aa17.56■□□□□ 0.4
RPAIN-213ENST00000573577 BCORQ6W2J9 1755 aa17.56■□□□□ 0.4
RPAIN-213ENST00000573577 ERBB4Q15303 1308 aa17.55■□□□□ 0.4
RPAIN-213ENST00000573577 BICDL1Q6ZP65 573 aa17.55■□□□□ 0.4
RPAIN-213ENST00000573577 KIAA1551Q9HCM1 1747 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms