RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 C8orf58Q8NAV2 365 aa30.13■■■□□ 2.41
TVP23A-206ENST00000572980 STK32BQ9NY57 414 aa30.13■■■□□ 2.41
TVP23A-206ENST00000572980 SOS1Q07889 1333 aaPredicted RBP30.12■■■□□ 2.41
TVP23A-206ENST00000572980 ELL2O00472 640 aaPredicted RBP30.12■■■□□ 2.41
TVP23A-206ENST00000572980 TRMT2AQ8IZ69 625 aaKnown RBP30.12■■■□□ 2.41
TVP23A-206ENST00000572980 AK7Q96M32 723 aa30.12■■■□□ 2.41
TVP23A-206ENST00000572980 C4BP0C0L5 1744 aa30.12■■■□□ 2.41
TVP23A-206ENST00000572980 EXOSC9Q06265 439 aaKnown RBP30.11■■■□□ 2.41
TVP23A-206ENST00000572980 AKT1S1Q96B36 256 aa30.11■■■□□ 2.41
TVP23A-206ENST00000572980 CHMP4AQ9BY43 222 aa30.11■■■□□ 2.41
TVP23A-206ENST00000572980 CCDC87Q9NVE4 849 aa30.11■■■□□ 2.41
TVP23A-206ENST00000572980 SLC15A2Q16348 729 aa30.1■■■□□ 2.41
TVP23A-206ENST00000572980 EIF2S2P20042 333 aaKnown RBP30.09■■■□□ 2.41
TVP23A-206ENST00000572980 TWISTNBQ3B726 338 aaPredicted RBP30.09■■■□□ 2.41
TVP23A-206ENST00000572980 ANO8Q9HCE9 1232 aaPredicted RBP30.09■■■□□ 2.41
TVP23A-206ENST00000572980 LAMB4A4D0S4 1761 aa30.09■■■□□ 2.41
TVP23A-206ENST00000572980 ZNF827Q17R98 1081 aa30.08■■■□□ 2.41
TVP23A-206ENST00000572980 INTS5Q6P9B9 1019 aaKnown RBP30.08■■■□□ 2.41
TVP23A-206ENST00000572980 TSPYL6Q8N831 410 aa30.08■■■□□ 2.41
TVP23A-206ENST00000572980 TFCP2L1Q9NZI6 479 aa30.08■■■□□ 2.41
TVP23A-206ENST00000572980 GNPATO15228 680 aa30.07■■■□□ 2.4
TVP23A-206ENST00000572980 A1BGP04217 495 aa30.07■■■□□ 2.4
TVP23A-206ENST00000572980 HDGFL1Q5TGJ6 251 aa30.06■■■□□ 2.4
TVP23A-206ENST00000572980 RTCBQ9Y3I0 505 aaKnown RBP30.06■■■□□ 2.4
TVP23A-206ENST00000572980 MYH14Q7Z406 1995 aaKnown RBP30.05■■■□□ 2.4
TVP23A-206ENST00000572980 RPS6KA4O75676 772 aa30.05■■■□□ 2.4
TVP23A-206ENST00000572980 ZBTB1Q9Y2K1 713 aa30.05■■■□□ 2.4
TVP23A-206ENST00000572980 CANXP27824 592 aaKnown RBP30.04■■■□□ 2.4
TVP23A-206ENST00000572980 ERBB4Q15303 1308 aa30.04■■■□□ 2.4
TVP23A-206ENST00000572980 NECTIN2Q92692 538 aa30.03■■■□□ 2.4
TVP23A-206ENST00000572980 VAMP4O75379 141 aa30.02■■■□□ 2.4
TVP23A-206ENST00000572980 SSFA2P28290 1259 aa30.02■■■□□ 2.4
TVP23A-206ENST00000572980 CCDC30Q5VVM6 783 aa30.02■■■□□ 2.4
TVP23A-206ENST00000572980 NPM2Q86SE8 214 aaKnown RBP30.02■■■□□ 2.4
TVP23A-206ENST00000572980 FLAD1Q8NFF5 587 aa30.02■■■□□ 2.4
TVP23A-206ENST00000572980 IL6STP40189 918 aaPredicted RBP30.01■■■□□ 2.39
TVP23A-206ENST00000572980 NBPF26B4DH59 902 aa29.99■■■□□ 2.39
TVP23A-206ENST00000572980 ADRA2BP18089 450 aa29.99■■■□□ 2.39
TVP23A-206ENST00000572980 TRAPPC3LQ5T215 181 aa29.99■■■□□ 2.39
TVP23A-206ENST00000572980 NBPF10Q6P3W6 841 aaKnown RBP29.99■■■□□ 2.39
TVP23A-206ENST00000572980 NBPF15Q8N660 670 aa29.99■■■□□ 2.39
TVP23A-206ENST00000572980 DBF4Q9UBU7 674 aaPredicted RBP29.99■■■□□ 2.39
TVP23A-206ENST00000572980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.98■■■□□ 2.39
TVP23A-206ENST00000572980 PHF14O94880 888 aa29.98■■■□□ 2.39
TVP23A-206ENST00000572980 PIP4K2AP48426 406 aaPredicted RBP29.98■■■□□ 2.39
TVP23A-206ENST00000572980 UBR3Q6ZT12 1888 aa29.98■■■□□ 2.39
TVP23A-206ENST00000572980 CT47B1P0C2W7 299 aaPredicted RBP29.98■■■□□ 2.39
TVP23A-206ENST00000572980 EIF5P55010 431 aaKnown RBP29.98■■■□□ 2.39
TVP23A-206ENST00000572980 R3HDM1Q15032 1099 aaKnown RBP29.98■■■□□ 2.39
TVP23A-206ENST00000572980 DDX21Q9NR30 783 aaKnown RBP eCLIP29.98■■■□□ 2.39
TVP23A-206ENST00000572980 ZNF330Q9Y3S2 320 aaPredicted RBP29.98■■■□□ 2.39
TVP23A-206ENST00000572980 CHPF2Q9P2E5 772 aa29.97■■■□□ 2.39
TVP23A-206ENST00000572980 MYL6BP14649 208 aa29.96■■■□□ 2.39
TVP23A-206ENST00000572980 AMIGO3Q86WK7 504 aa29.96■■■□□ 2.39
TVP23A-206ENST00000572980 STK31Q9BXU1 1019 aa29.96■■■□□ 2.39
TVP23A-206ENST00000572980 PNPLA7Q6ZV29 1317 aa29.96■■■□□ 2.39
TVP23A-206ENST00000572980 PDIA6Q15084 440 aa29.95■■■□□ 2.39
TVP23A-206ENST00000572980 ZNF428Q96B54 188 aa29.95■■■□□ 2.39
TVP23A-206ENST00000572980 QSER1Q2KHR3 1735 aa29.95■■■□□ 2.38
TVP23A-206ENST00000572980 A0A087WZG4 1122 aa29.94■■■□□ 2.38
TVP23A-206ENST00000572980 SMIM5Q71RC9 77 aa29.94■■■□□ 2.38
TVP23A-206ENST00000572980 ARHGEF1Q92888 912 aaKnown RBP29.94■■■□□ 2.38
TVP23A-206ENST00000572980 RFC4P35249 363 aa29.94■■■□□ 2.38
TVP23A-206ENST00000572980 COL23A1Q86Y22 540 aaPredicted RBP29.94■■■□□ 2.38
TVP23A-206ENST00000572980 COL15A1P39059 1388 aa29.94■■■□□ 2.38
TVP23A-206ENST00000572980 TUBGCP6Q96RT7 1819 aa29.94■■■□□ 2.38
TVP23A-206ENST00000572980 MSH5O43196 834 aa29.93■■■□□ 2.38
TVP23A-206ENST00000572980 HYPKQ9NX55 129 aa29.93■■■□□ 2.38
TVP23A-206ENST00000572980 PROSER3Q2NL68 480 aa29.92■■■□□ 2.38
TVP23A-206ENST00000572980 PSDA5PKW4 1024 aaPredicted RBP29.91■■■□□ 2.38
TVP23A-206ENST00000572980 ANXA1P04083 346 aa29.91■■■□□ 2.38
TVP23A-206ENST00000572980 ARXQ96QS3 562 aa29.91■■■□□ 2.38
TVP23A-206ENST00000572980 TCERG1O14776 1098 aaKnown RBP29.9■■■□□ 2.38
TVP23A-206ENST00000572980 SLC4A2P04920 1241 aa29.89■■■□□ 2.38
TVP23A-206ENST00000572980 LRP10Q7Z4F1 713 aa29.89■■■□□ 2.38
TVP23A-206ENST00000572980 ZPR1O75312 459 aa29.88■■■□□ 2.37
TVP23A-206ENST00000572980 DZIP3Q86Y13 1208 aaKnown RBP29.88■■■□□ 2.37
TVP23A-206ENST00000572980 TBC1D2BQ9UPU7 963 aa29.87■■■□□ 2.37
TVP23A-206ENST00000572980 ALDH1L2Q3SY69 923 aa29.86■■■□□ 2.37
TVP23A-206ENST00000572980 COPS6Q7L5N1 327 aa29.86■■■□□ 2.37
TVP23A-206ENST00000572980 SLC16A10Q8TF71 515 aa29.86■■■□□ 2.37
TVP23A-206ENST00000572980 NARFQ9UHQ1 456 aa29.86■■■□□ 2.37
TVP23A-206ENST00000572980 AIMP1Q12904 312 aaKnown RBP29.85■■■□□ 2.37
TVP23A-206ENST00000572980 KIF6Q6ZMV9 814 aa29.85■■■□□ 2.37
TVP23A-206ENST00000572980 XAGE3Q8WTP9 111 aa29.85■■■□□ 2.37
TVP23A-206ENST00000572980 PDGFDQ9GZP0 370 aaPredicted RBP29.85■■■□□ 2.37
TVP23A-206ENST00000572980 USP42Q9H9J4 1324 aaKnown RBP29.84■■■□□ 2.37
TVP23A-206ENST00000572980 CACNA1FO60840 1977 aa29.84■■■□□ 2.37
TVP23A-206ENST00000572980 C4AP0C0L4 1744 aa29.83■■■□□ 2.37
TVP23A-206ENST00000572980 SSH1Q8WYL5 1049 aa29.83■■■□□ 2.37
TVP23A-206ENST00000572980 PHAXQ9H814 394 aaKnown RBP29.83■■■□□ 2.37
TVP23A-206ENST00000572980 TTLL7Q6ZT98 887 aa29.82■■■□□ 2.36
TVP23A-206ENST00000572980 SRP68Q9UHB9 627 aaKnown RBP29.82■■■□□ 2.36
TVP23A-206ENST00000572980 USPL1Q5W0Q7 1092 aa29.81■■■□□ 2.36
TVP23A-206ENST00000572980 RARSP54136 660 aaKnown RBP29.81■■■□□ 2.36
TVP23A-206ENST00000572980 SMC4Q9NTJ3 1288 aa29.81■■■□□ 2.36
TVP23A-206ENST00000572980 ERVV-1B6SEH8 477 aa29.8■■■□□ 2.36
TVP23A-206ENST00000572980 CAMTA2O94983 1202 aa29.8■■■□□ 2.36
TVP23A-206ENST00000572980 MAP3K15Q6ZN16 1313 aa29.8■■■□□ 2.36
TVP23A-206ENST00000572980 CASZ1Q86V15 1759 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms