RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CFAP69A5D8W1 941 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 IFRD1O00458 451 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 FDX1P10109 184 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 NOS2P35228 1153 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 USP46P62068 366 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 PLCB3Q01970 1234 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 NCOA4Q13772 614 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 TRIM50Q86XT4 487 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 SDR16C5Q8N3Y7 309 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 OGFOD1Q8N543 542 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 TTC13Q8NBP0 860 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 PPM1EQ8WY54 764 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 SCINQ9Y6U3 715 aa6.45□□□□□ -1.38
TOPBP1-210ENST00000572787 NDUFB5O43674 189 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 CDC45O75419 566 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 GNALP38405 381 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 ATP2B2Q01814 1243 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 TMEM92Q6UXU6 159 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 CXorf38Q8TB03 319 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 FAM174AQ8TBP5 190 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 CEP63Q96MT8 703 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 CITED4Q96RK1 184 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 PAGR1Q9BTK6 254 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 ANO8Q9HCE9 1232 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 HOMER2Q9NSB8 354 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 MAP3K20Q9NYL2 800 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 SIRPGQ9P1W8 387 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 EMILIN1Q9Y6C2 1016 aa6.44□□□□□ -1.38
TOPBP1-210ENST00000572787 DDX11L8A8MPP1 907 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 NR1I2O75469 434 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 FAM13AO94988 1023 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 FGAP02671 866 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 KRT18P05783 430 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 ATF4P18848 351 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 MAPK8P45983 427 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 ATP1A2P50993 1020 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 CHMP4BP1P59074 171 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 POU5F1Q01860 360 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 CNGB1Q14028 1251 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 BRD3Q15059 726 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 NR6A1Q15406 480 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 ZNF512BQ96KM6 892 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 SRPK1Q96SB4 655 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 MPHOSPH6Q99547 160 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 CASS4Q9NQ75 786 aa6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 AVENQ9NQS1 362 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-210ENST00000572787 EPB41L2O43491 1005 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 ZRANB2O95218 330 aaKnown RBP eCLIP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 GJA8P48165 433 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 RACK1P63244 317 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 MTMR2Q13614 643 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 HLTFQ14527 1009 aaKnown RBP eCLIP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 DSC3Q14574 896 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 PPP2R5AQ15172 486 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 MAPRE1Q15691 268 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 ZNF394Q53GI3 561 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 TYW1BQ6NUM6 668 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 USP48Q86UV5 1035 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 WDR75Q8IWA0 830 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 ZNF594Q96JF6 807 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 ARHGEF10LQ9HCE6 1279 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 DNAAF2Q9NVR5 837 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 SEPT3Q9UH03 358 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 NRBP1Q9UHY1 535 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 NOD1Q9Y239 953 aa6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 THRAP3Q9Y2W1 955 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-210ENST00000572787 RCCD1A6NED2 376 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 ZBBXA8MT70 800 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 TNFRSF10BO14763 440 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 PTCD1O75127 700 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 FOSP01100 380 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 COL6A1P12109 1028 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 PBX2P40425 430 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 SEC13P55735 322 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 EXOSC10Q01780 885 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 EML3Q32P44 896 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 EFCAB2Q5VUJ9 269 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 LRP10Q7Z4F1 713 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 PDILTQ8N807 584 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 TMC1Q8TDI8 760 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 APPBP2Q92624 585 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 SLC39A13Q96H72 371 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 DMRTB1Q96MA1 342 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 INO80BQ9C086 356 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 C12orf49Q9H741 205 aa6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 RBM19Q9Y4C8 960 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-210ENST00000572787 NRDCO43847 1150 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 MYL1P05976 194 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 FBXO45P0C2W1 286 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 NPR3P17342 541 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 EHHADHQ08426 723 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 MTMR3Q13615 1198 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 TTC39BQ5VTQ0 682 aaPredicted RBP6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 ICE2Q659A1 982 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 CCDC174Q6PII3 467 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 PAF1Q8N7H5 531 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 KHSRPQ92945 711 aaKnown RBP eCLIP6.4□□□□□ -1.381e-6■■■■□ 23.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms