RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 VSIG10Q8N0Z9 540 aa23.74■■□□□ 1.39
PFN1-202ENST00000572383 FMNL2Q96PY5 1086 aa23.74■■□□□ 1.39
PFN1-202ENST00000572383 HEG1Q9ULI3 1381 aa23.74■■□□□ 1.39
PFN1-202ENST00000572383 KDM3BQ7LBC6 1761 aa23.73■■□□□ 1.39
PFN1-202ENST00000572383 PHF14O94880 888 aa23.73■■□□□ 1.39
PFN1-202ENST00000572383 KLHL34Q8N239 644 aa23.73■■□□□ 1.39
PFN1-202ENST00000572383 RC3H1Q5TC82 1133 aaKnown RBP23.72■■□□□ 1.39
PFN1-202ENST00000572383 CNTNAP4Q9C0A0 1308 aa23.71■■□□□ 1.39
PFN1-202ENST00000572383 NLGN2Q8NFZ4 835 aa23.71■■□□□ 1.39
PFN1-202ENST00000572383 TSPYL4Q9UJ04 414 aa23.71■■□□□ 1.39
PFN1-202ENST00000572383 KIF13BQ9NQT8 1826 aa23.7■■□□□ 1.39
PFN1-202ENST00000572383 CYP19A1P11511 503 aaPredicted RBP23.7■■□□□ 1.38
PFN1-202ENST00000572383 CRKLP46109 303 aaKnown RBP23.7■■□□□ 1.38
PFN1-202ENST00000572383 RTCBQ9Y3I0 505 aaKnown RBP23.69■■□□□ 1.38
PFN1-202ENST00000572383 LAS1LQ9Y4W2 734 aaKnown RBP23.69■■□□□ 1.38
PFN1-202ENST00000572383 PRAMEF22A3QJZ6 481 aa23.68■■□□□ 1.38
PFN1-202ENST00000572383 ADRA2BP18089 450 aa23.68■■□□□ 1.38
PFN1-202ENST00000572383 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
PFN1-202ENST00000572383 KIAA1551Q9HCM1 1747 aa23.67■■□□□ 1.38
PFN1-202ENST00000572383 EIF4A1P60842 406 aaKnown RBP23.67■■□□□ 1.38
PFN1-202ENST00000572383 CCDC27Q2M243 656 aa23.67■■□□□ 1.38
PFN1-202ENST00000572383 INTS5Q6P9B9 1019 aaKnown RBP23.67■■□□□ 1.38
PFN1-202ENST00000572383 BABAM1Q9NWV8 329 aa23.67■■□□□ 1.38
PFN1-202ENST00000572383 CHL1O00533 1208 aa23.66■■□□□ 1.38
PFN1-202ENST00000572383 TRAPPC3LQ5T215 181 aa23.66■■□□□ 1.38
PFN1-202ENST00000572383 TEX13AQ9BXU3 409 aaPredicted RBP23.66■■□□□ 1.38
PFN1-202ENST00000572383 CCDC87Q9NVE4 849 aa23.66■■□□□ 1.38
PFN1-202ENST00000572383 RPS6KA4O75676 772 aa23.65■■□□□ 1.38
PFN1-202ENST00000572383 STARD3NLO95772 234 aa23.65■■□□□ 1.38
PFN1-202ENST00000572383 SNRPA1P09661 255 aaKnown RBP23.65■■□□□ 1.38
PFN1-202ENST00000572383 NCBP3Q53F19 620 aaKnown RBP23.65■■□□□ 1.38
PFN1-202ENST00000572383 WWC1Q8IX03 1113 aa23.65■■□□□ 1.38
PFN1-202ENST00000572383 N4BP2Q86UW6 1770 aaPredicted RBP23.65■■□□□ 1.38
PFN1-202ENST00000572383 CALD1Q05682 793 aaKnown RBP23.64■■□□□ 1.37
PFN1-202ENST00000572383 CFAP44Q96MT7 982 aa23.64■■□□□ 1.37
PFN1-202ENST00000572383 CD2APQ9Y5K6 639 aa23.64■■□□□ 1.37
PFN1-202ENST00000572383 USP16Q9Y5T5 823 aa23.64■■□□□ 1.37
PFN1-202ENST00000572383 ZBTB1Q9Y2K1 713 aa23.63■■□□□ 1.37
PFN1-202ENST00000572383 GIGYF1O75420 1035 aaPredicted RBP23.62■■□□□ 1.37
PFN1-202ENST00000572383 ZNF853P0CG23 659 aa23.62■■□□□ 1.37
PFN1-202ENST00000572383 GPR162Q16538 588 aa23.62■■□□□ 1.37
PFN1-202ENST00000572383 IFT57Q9NWB7 429 aa23.62■■□□□ 1.37
PFN1-202ENST00000572383 BRCA1P38398 1863 aaKnown RBP23.62■■□□□ 1.37
PFN1-202ENST00000572383 ARHGEF1Q92888 912 aaKnown RBP23.61■■□□□ 1.37
PFN1-202ENST00000572383 MBIPQ9NS73 344 aa23.61■■□□□ 1.37
PFN1-202ENST00000572383 A1BGP04217 495 aa23.6■■□□□ 1.37
PFN1-202ENST00000572383 CANXP27824 592 aaKnown RBP23.6■■□□□ 1.37
PFN1-202ENST00000572383 RFC4P35249 363 aa23.6■■□□□ 1.37
PFN1-202ENST00000572383 GNAI1P63096 354 aa23.6■■□□□ 1.37
PFN1-202ENST00000572383 NLGN1Q8N2Q7 840 aa23.6■■□□□ 1.37
PFN1-202ENST00000572383 SOS1Q07889 1333 aaPredicted RBP23.59■■□□□ 1.37
PFN1-202ENST00000572383 YBX3P16989 372 aaKnown RBP eCLIP23.59■■□□□ 1.373e-27■■■□□ 15.4
PFN1-202ENST00000572383 PELP1Q8IZL8 1130 aaKnown RBP23.59■■□□□ 1.37
PFN1-202ENST00000572383 LAMB4A4D0S4 1761 aa23.58■■□□□ 1.37
PFN1-202ENST00000572383 KRT24Q2M2I5 525 aa23.58■■□□□ 1.37
PFN1-202ENST00000572383 PIP4K2AP48426 406 aaPredicted RBP23.57■■□□□ 1.36
PFN1-202ENST00000572383 ZNF784Q8NCA9 323 aaPredicted RBP23.57■■□□□ 1.36
PFN1-202ENST00000572383 MMP10P09238 476 aa23.56■■□□□ 1.36
PFN1-202ENST00000572383 GYS1P13807 737 aa23.56■■□□□ 1.36
PFN1-202ENST00000572383 NGEFQ8N5V2 710 aa23.56■■□□□ 1.36
PFN1-202ENST00000572383 COL15A1P39059 1388 aa23.55■■□□□ 1.36
PFN1-202ENST00000572383 WDR63Q8IWG1 891 aa23.55■■□□□ 1.36
PFN1-202ENST00000572383 IL16Q14005 1332 aa23.55■■□□□ 1.36
PFN1-202ENST00000572383 EIF5P55010 431 aaKnown RBP23.54■■□□□ 1.36
PFN1-202ENST00000572383 TSR2Q969E8 191 aaKnown RBP23.54■■□□□ 1.36
PFN1-202ENST00000572383 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
PFN1-202ENST00000572383 AFDNP55196 1824 aaKnown RBP23.54■■□□□ 1.36
PFN1-202ENST00000572383 NBPF26B4DH59 902 aa23.53■■□□□ 1.36
PFN1-202ENST00000572383 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
PFN1-202ENST00000572383 NBPF10Q6P3W6 841 aaKnown RBP23.53■■□□□ 1.36
PFN1-202ENST00000572383 NBPF15Q8N660 670 aa23.53■■□□□ 1.36
PFN1-202ENST00000572383 SRP68Q9UHB9 627 aaKnown RBP23.53■■□□□ 1.36
PFN1-202ENST00000572383 GRIN3BO60391 1043 aa23.52■■□□□ 1.36
PFN1-202ENST00000572383 EIF2S2P20042 333 aaKnown RBP23.52■■□□□ 1.36
PFN1-202ENST00000572383 ZNF521Q96K83 1311 aa23.52■■□□□ 1.36
PFN1-202ENST00000572383 USP42Q9H9J4 1324 aaKnown RBP23.52■■□□□ 1.36
PFN1-202ENST00000572383 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
PFN1-202ENST00000572383 ARFGEF1Q9Y6D6 1849 aa23.49■■□□□ 1.35
PFN1-202ENST00000572383 DUSP27Q5VZP5 1158 aa23.49■■□□□ 1.35
PFN1-202ENST00000572383 USPL1Q5W0Q7 1092 aa23.49■■□□□ 1.35
PFN1-202ENST00000572383 NECTIN2Q92692 538 aa23.49■■□□□ 1.35
PFN1-202ENST00000572383 NARFQ9UHQ1 456 aa23.49■■□□□ 1.35
PFN1-202ENST00000572383 A0A087WZG4 1122 aa23.48■■□□□ 1.35
PFN1-202ENST00000572383 ELL2O00472 640 aaPredicted RBP23.48■■□□□ 1.35
PFN1-202ENST00000572383 ZPR1O75312 459 aa23.48■■□□□ 1.35
PFN1-202ENST00000572383 C8orf58Q8NAV2 365 aa23.48■■□□□ 1.35
PFN1-202ENST00000572383 TBC1D2BQ9UPU7 963 aa23.48■■□□□ 1.35
PFN1-202ENST00000572383 PARP3Q9Y6F1 533 aa23.48■■□□□ 1.35
PFN1-202ENST00000572383 MYL6BP14649 208 aa23.47■■□□□ 1.35
PFN1-202ENST00000572383 NPM2Q86SE8 214 aaKnown RBP23.47■■□□□ 1.35
PFN1-202ENST00000572383 FANCIQ9NVI1 1328 aa23.47■■□□□ 1.35
PFN1-202ENST00000572383 C10orf71Q711Q0 1435 aa23.47■■□□□ 1.35
PFN1-202ENST00000572383 PXDNLA1KZ92 1463 aa23.46■■□□□ 1.35
PFN1-202ENST00000572383 HOXB7P09629 217 aa23.46■■□□□ 1.35
PFN1-202ENST00000572383 FKBP8Q14318 412 aa23.46■■□□□ 1.35
PFN1-202ENST00000572383 ERBB4Q15303 1308 aa23.45■■□□□ 1.34
PFN1-202ENST00000572383 PDIA6Q15084 440 aa23.45■■□□□ 1.34
PFN1-202ENST00000572383 HDGFL1Q5TGJ6 251 aa23.45■■□□□ 1.34
PFN1-202ENST00000572383 DZIP3Q86Y13 1208 aaKnown RBP23.45■■□□□ 1.34
PFN1-202ENST00000572383 TSPYL6Q8N831 410 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms