RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 USP16Q9Y5T5 823 aa12.16□□□□□ -0.46
NPLOC4-208ENST00000572351 BTAF1O14981 1849 aa12.16□□□□□ -0.46
NPLOC4-208ENST00000572351 GNPATO15228 680 aa12.15□□□□□ -0.46
NPLOC4-208ENST00000572351 CYP19A1P11511 503 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-208ENST00000572351 CANXP27824 592 aaKnown RBP12.15□□□□□ -0.46
NPLOC4-208ENST00000572351 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
NPLOC4-208ENST00000572351 CCDC87Q9NVE4 849 aa12.15□□□□□ -0.46
NPLOC4-208ENST00000572351 STK32BQ9NY57 414 aa12.15□□□□□ -0.46
NPLOC4-208ENST00000572351 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-208ENST00000572351 PAPPAQ13219 1627 aa12.15□□□□□ -0.47
NPLOC4-208ENST00000572351 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-208ENST00000572351 CNTNAP4Q9C0A0 1308 aa12.14□□□□□ -0.47
NPLOC4-208ENST00000572351 SOCS7O14512 581 aa12.14□□□□□ -0.47
NPLOC4-208ENST00000572351 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-208ENST00000572351 CCDC30Q5VVM6 783 aa12.14□□□□□ -0.47
NPLOC4-208ENST00000572351 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
NPLOC4-208ENST00000572351 ITGB4P16144 1822 aa12.14□□□□□ -0.47
NPLOC4-208ENST00000572351 SBF2Q86WG5 1849 aa12.14□□□□□ -0.47
NPLOC4-208ENST00000572351 SIPA1L3O60292 1781 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 VAMP4O75379 141 aa12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 A1BGP04217 495 aa12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 ARXQ96QS3 562 aa12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 DBF4Q9UBU7 674 aaPredicted RBP12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 ZBTB1Q9Y2K1 713 aa12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 RTCBQ9Y3I0 505 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 KDM3BQ7LBC6 1761 aa12.13□□□□□ -0.47
NPLOC4-208ENST00000572351 ERBB4Q15303 1308 aa12.12□□□□□ -0.47
NPLOC4-208ENST00000572351 PHF14O94880 888 aa12.12□□□□□ -0.47
NPLOC4-208ENST00000572351 MYL6BP14649 208 aa12.12□□□□□ -0.47
NPLOC4-208ENST00000572351 PIP4K2AP48426 406 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-208ENST00000572351 ZNF827Q17R98 1081 aa12.12□□□□□ -0.47
NPLOC4-208ENST00000572351 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-208ENST00000572351 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-208ENST00000572351 CHPF2Q9P2E5 772 aa12.12□□□□□ -0.47
NPLOC4-208ENST00000572351 IL6STP40189 918 aaPredicted RBP12.11□□□□□ -0.47
NPLOC4-208ENST00000572351 SLC15A2Q16348 729 aa12.11□□□□□ -0.47
NPLOC4-208ENST00000572351 ZNF428Q96B54 188 aa12.11□□□□□ -0.47
NPLOC4-208ENST00000572351 EP400Q96L91 3159 aa12.11□□□□□ -0.47
NPLOC4-208ENST00000572351 RPS6KA4O75676 772 aa12.1□□□□□ -0.47
NPLOC4-208ENST00000572351 ANXA1P04083 346 aa12.1□□□□□ -0.47
NPLOC4-208ENST00000572351 TRAPPC3LQ5T215 181 aa12.1□□□□□ -0.47
NPLOC4-208ENST00000572351 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
NPLOC4-208ENST00000572351 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-208ENST00000572351 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPLOC4-208ENST00000572351 SMC4Q9NTJ3 1288 aa12.1□□□□□ -0.47
NPLOC4-208ENST00000572351 HYPKQ9NX55 129 aa12.1□□□□□ -0.47
NPLOC4-208ENST00000572351 A0A087WZG4 1122 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 SSFA2P28290 1259 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 PROSER3Q2NL68 480 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 KIF6Q6ZMV9 814 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 FLAD1Q8NFF5 587 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 BCL2L13Q9BXK5 485 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
NPLOC4-208ENST00000572351 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-208ENST00000572351 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
NPLOC4-208ENST00000572351 RFC4P35249 363 aa12.08□□□□□ -0.48
NPLOC4-208ENST00000572351 EIF5P55010 431 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-208ENST00000572351 AIMP1Q12904 312 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-208ENST00000572351 ALDH1L2Q3SY69 923 aa12.08□□□□□ -0.48
NPLOC4-208ENST00000572351 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
NPLOC4-208ENST00000572351 LY75O60449 1722 aa12.08□□□□□ -0.48
NPLOC4-208ENST00000572351 KAT6BQ8WYB5 2073 aa12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 COL15A1P39059 1388 aa12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 ZPR1O75312 459 aa12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 R3HDM1Q15032 1099 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 PDIA6Q15084 440 aa12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 COPS6Q7L5N1 327 aa12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 XAGE3Q8WTP9 111 aa12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 RCAN3Q9UKA8 241 aa12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-208ENST00000572351 C5P01031 1676 aa12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 C4BP0C0L5 1744 aa12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 TJP1Q07157 1748 aa12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 MRPL50Q8N5N7 158 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 ARHGEF1Q92888 912 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 ZNF831Q5JPB2 1677 aa12.06□□□□□ -0.48
NPLOC4-208ENST00000572351 PSDA5PKW4 1024 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-208ENST00000572351 FLIIQ13045 1269 aa12.05□□□□□ -0.48
NPLOC4-208ENST00000572351 FKBP5Q13451 457 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-208ENST00000572351 TTLL7Q6ZT98 887 aa12.05□□□□□ -0.48
NPLOC4-208ENST00000572351 COL23A1Q86Y22 540 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-208ENST00000572351 PHAXQ9H814 394 aaKnown RBP12.05□□□□□ -0.48
NPLOC4-208ENST00000572351 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
NPLOC4-208ENST00000572351 PNPLA7Q6ZV29 1317 aa12.05□□□□□ -0.48
NPLOC4-208ENST00000572351 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-208ENST00000572351 BCAR3O75815 825 aa12.04□□□□□ -0.48
NPLOC4-208ENST00000572351 CENPBP07199 599 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-208ENST00000572351 ANKRD13DQ6ZTN6 518 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms