RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 BABAM1Q9NWV8 329 aa11.41□□□□□ -0.58
TRAPPC1-203ENST00000571739 ZBTB1Q9Y2K1 713 aa11.41□□□□□ -0.58
TRAPPC1-203ENST00000571739 UBR2Q8IWV8 1755 aa11.41□□□□□ -0.58
TRAPPC1-203ENST00000571739 TJP1Q07157 1748 aa11.4□□□□□ -0.58
TRAPPC1-203ENST00000571739 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC1-203ENST00000571739 ZNF853P0CG23 659 aa11.4□□□□□ -0.58
TRAPPC1-203ENST00000571739 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
TRAPPC1-203ENST00000571739 COL5A3P25940 1745 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC1-203ENST00000571739 QSER1Q2KHR3 1735 aa11.4□□□□□ -0.58
TRAPPC1-203ENST00000571739 UBR3Q6ZT12 1888 aa11.4□□□□□ -0.59
TRAPPC1-203ENST00000571739 STARD3NLO95772 234 aa11.39□□□□□ -0.59
TRAPPC1-203ENST00000571739 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-203ENST00000571739 EIF5P55010 431 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-203ENST00000571739 CCDC27Q2M243 656 aa11.39□□□□□ -0.59
TRAPPC1-203ENST00000571739 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-203ENST00000571739 WWC1Q8IX03 1113 aa11.39□□□□□ -0.59
TRAPPC1-203ENST00000571739 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
TRAPPC1-203ENST00000571739 LAS1LQ9Y4W2 734 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-203ENST00000571739 SOS1Q07889 1333 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 NBPF26B4DH59 902 aa11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 ADRA2BP18089 450 aa11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 KRT24Q2M2I5 525 aa11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 NBPF10Q6P3W6 841 aaKnown RBP11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 NBPF15Q8N660 670 aa11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 SRP68Q9UHB9 627 aaKnown RBP11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC1-203ENST00000571739 GYS1P13807 737 aa11.37□□□□□ -0.59
TRAPPC1-203ENST00000571739 RFC4P35249 363 aa11.37□□□□□ -0.59
TRAPPC1-203ENST00000571739 MBIPQ9NS73 344 aa11.37□□□□□ -0.59
TRAPPC1-203ENST00000571739 IL6STP40189 918 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC1-203ENST00000571739 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
TRAPPC1-203ENST00000571739 KDM3BQ7LBC6 1761 aa11.36□□□□□ -0.59
TRAPPC1-203ENST00000571739 LRP5O75197 1615 aa11.35□□□□□ -0.59
TRAPPC1-203ENST00000571739 USPL1Q5W0Q7 1092 aa11.35□□□□□ -0.59
TRAPPC1-203ENST00000571739 ARXQ96QS3 562 aa11.35□□□□□ -0.59
TRAPPC1-203ENST00000571739 IFT57Q9NWB7 429 aa11.35□□□□□ -0.59
TRAPPC1-203ENST00000571739 NARFQ9UHQ1 456 aa11.35□□□□□ -0.59
TRAPPC1-203ENST00000571739 TBC1D2BQ9UPU7 963 aa11.35□□□□□ -0.59
TRAPPC1-203ENST00000571739 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
TRAPPC1-203ENST00000571739 EIF2S2P20042 333 aaKnown RBP11.34□□□□□ -0.59
TRAPPC1-203ENST00000571739 TM4SF1P30408 202 aa11.34□□□□□ -0.59
TRAPPC1-203ENST00000571739 GNAI1P63096 354 aa11.34□□□□□ -0.59
TRAPPC1-203ENST00000571739 FKBP8Q14318 412 aa11.34□□□□□ -0.59
TRAPPC1-203ENST00000571739 PDIA6Q15084 440 aa11.34□□□□□ -0.59
TRAPPC1-203ENST00000571739 NLGN1Q8N2Q7 840 aa11.34□□□□□ -0.59
TRAPPC1-203ENST00000571739 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC1-203ENST00000571739 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
TRAPPC1-203ENST00000571739 COL15A1P39059 1388 aa11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 ZPR1O75312 459 aa11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 POLD1P28340 1107 aa11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 CALD1Q05682 793 aaKnown RBP11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 LRP10Q7Z4F1 713 aa11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 WDR63Q8IWG1 891 aa11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 SYT17Q9BSW7 474 aa11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 PPP1R1BQ9UD71 204 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 ZNF330Q9Y3S2 320 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC1-203ENST00000571739 A0A087WZG4 1122 aa11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 MMP10P09238 476 aa11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 DUSP27Q5VZP5 1158 aa11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 C8orf58Q8NAV2 365 aa11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 TSR2Q969E8 191 aaKnown RBP11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
TRAPPC1-203ENST00000571739 ANXA1P04083 346 aa11.31□□□□□ -0.6
TRAPPC1-203ENST00000571739 MYL6BP14649 208 aa11.31□□□□□ -0.6
TRAPPC1-203ENST00000571739 PROSER3Q2NL68 480 aa11.31□□□□□ -0.6
TRAPPC1-203ENST00000571739 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
TRAPPC1-203ENST00000571739 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
TRAPPC1-203ENST00000571739 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
TRAPPC1-203ENST00000571739 IL16Q14005 1332 aa11.31□□□□□ -0.6
TRAPPC1-203ENST00000571739 DDR1Q08345 913 aa11.3□□□□□ -0.6
TRAPPC1-203ENST00000571739 NFIXQ14938 502 aa11.3□□□□□ -0.6
TRAPPC1-203ENST00000571739 TBC1D9BQ66K14 1250 aa11.3□□□□□ -0.6
TRAPPC1-203ENST00000571739 TTLL7Q6ZT98 887 aa11.3□□□□□ -0.6
TRAPPC1-203ENST00000571739 C4AP0C0L4 1744 aa11.29□□□□□ -0.6
TRAPPC1-203ENST00000571739 POLRMTO00411 1230 aaKnown RBP11.29□□□□□ -0.6
TRAPPC1-203ENST00000571739 HOXB7P09629 217 aa11.29□□□□□ -0.6
TRAPPC1-203ENST00000571739 HLFQ16534 295 aa11.29□□□□□ -0.6
TRAPPC1-203ENST00000571739 ERBB4Q15303 1308 aa11.29□□□□□ -0.6
TRAPPC1-203ENST00000571739 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
TRAPPC1-203ENST00000571739 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
TRAPPC1-203ENST00000571739 NLGN2Q8NFZ4 835 aa11.28□□□□□ -0.6
TRAPPC1-203ENST00000571739 DDX21Q9NR30 783 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAPPC1-203ENST00000571739 PARP3Q9Y6F1 533 aa11.28□□□□□ -0.6
TRAPPC1-203ENST00000571739 VAMP4O75379 141 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 SERPINB2P05120 415 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 HDGFL1Q5TGJ6 251 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 COPS6Q7L5N1 327 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 KLHL34Q8N239 644 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 CD2APQ9Y5K6 639 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 SRCAPQ6ZRS2 3230 aa11.27□□□□□ -0.61
TRAPPC1-203ENST00000571739 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms