RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
NUP88-202ENST00000570937 LBRQ14739 615 aaKnown RBP8.07□□□□□ -1.12
NUP88-202ENST00000570937 TEAD4Q15561 434 aa8.07□□□□□ -1.12
NUP88-202ENST00000570937 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
NUP88-202ENST00000570937 RIPOR1Q6ZS17 1223 aa8.07□□□□□ -1.12
NUP88-202ENST00000570937 SLC9A9Q8IVB4 645 aa8.07□□□□□ -1.12
NUP88-202ENST00000570937 TSEN2Q8NCE0 465 aaKnown RBP8.07□□□□□ -1.12
NUP88-202ENST00000570937 ZNF837Q96EG3 531 aaPredicted RBP8.07□□□□□ -1.12
NUP88-202ENST00000570937 CDC14CA4D256 554 aa8.06□□□□□ -1.12
NUP88-202ENST00000570937 MSX1P28360 303 aa8.06□□□□□ -1.12
NUP88-202ENST00000570937 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
NUP88-202ENST00000570937 CRISPLD1Q9H336 500 aa8.06□□□□□ -1.12
NUP88-202ENST00000570937 ZDHHC3Q9NYG2 299 aa8.06□□□□□ -1.12
NUP88-202ENST00000570937 CABP1Q9NZU7 370 aa8.06□□□□□ -1.12
NUP88-202ENST00000570937 TIMELESSQ9UNS1 1208 aa8.06□□□□□ -1.12
NUP88-202ENST00000570937 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.05□□□□□ -1.12
NUP88-202ENST00000570937 ATG7O95352 703 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 THBS1P07996 1170 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 ATP4AP20648 1035 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 NOS2P35228 1153 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 NBPF1Q3BBV0 1214 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 CDCA8Q53HL2 280 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 ZDHHC1Q8WTX9 485 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 PBXIP1Q96AQ6 731 aa8.05□□□□□ -1.12
NUP88-202ENST00000570937 TSPAN10Q9H1Z9 355 aaPredicted RBP8.05□□□□□ -1.12
NUP88-202ENST00000570937 HIRAP54198 1017 aaPredicted RBP8.04□□□□□ -1.12
NUP88-202ENST00000570937 PSMA6P60900 246 aaKnown RBP8.04□□□□□ -1.12
NUP88-202ENST00000570937 STAG2Q8N3U4 1231 aa8.04□□□□□ -1.12
NUP88-202ENST00000570937 FAM200AQ8TCP9 573 aa8.04□□□□□ -1.12
NUP88-202ENST00000570937 L3MBTL2Q969R5 705 aa8.04□□□□□ -1.12
NUP88-202ENST00000570937 NUCKS1Q9H1E3 243 aaKnown RBP8.04□□□□□ -1.12
NUP88-202ENST00000570937 GPAMQ9HCL2 828 aa8.04□□□□□ -1.12
NUP88-202ENST00000570937 C21orf2O43822 256 aa8.03□□□□□ -1.12
NUP88-202ENST00000570937 CSB-PGBD3P0DP91 1061 aa8.03□□□□□ -1.12
NUP88-202ENST00000570937 UBAP2LQ14157 1087 aaKnown RBP8.03□□□□□ -1.12
NUP88-202ENST00000570937 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
NUP88-202ENST00000570937 PGBD3Q8N328 593 aa8.03□□□□□ -1.12
NUP88-202ENST00000570937 COL25A1Q9BXS0 654 aaPredicted RBP8.03□□□□□ -1.12
NUP88-202ENST00000570937 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
NUP88-202ENST00000570937 ATAD2Q6PL18 1390 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 SERTM1A2A2V5 107 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 EML1O00423 815 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 KRT76Q01546 638 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 AIDAQ96BJ3 306 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 RUBCNLQ9H714 662 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 ZMIZ1Q9ULJ6 1067 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 PARP3Q9Y6F1 533 aa8.02□□□□□ -1.13
NUP88-202ENST00000570937 TATP17735 454 aaPredicted RBP8.01□□□□□ -1.13
NUP88-202ENST00000570937 IGFBP4P22692 258 aa8.01□□□□□ -1.13
NUP88-202ENST00000570937 TXLNAP40222 546 aa8.01□□□□□ -1.13
NUP88-202ENST00000570937 EFHC2Q5JST6 749 aa8.01□□□□□ -1.13
NUP88-202ENST00000570937 NLRP8Q86W28 1048 aa8.01□□□□□ -1.13
NUP88-202ENST00000570937 C7orf43Q8WVR3 580 aa8.01□□□□□ -1.13
NUP88-202ENST00000570937 GTPBP3Q969Y2 492 aaKnown RBP8.01□□□□□ -1.13
NUP88-202ENST00000570937 HINFPQ9BQA5 517 aa8.01□□□□□ -1.13
NUP88-202ENST00000570937 C2orf49Q9BVC5 232 aaPredicted RBP8.01□□□□□ -1.13
NUP88-202ENST00000570937 CHMP3Q9Y3E7 222 aa8.01□□□□□ -1.13
NUP88-202ENST00000570937 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
NUP88-202ENST00000570937 GAS6Q14393 721 aa8□□□□□ -1.13
NUP88-202ENST00000570937 SWI5Q1ZZU3 235 aa8□□□□□ -1.13
NUP88-202ENST00000570937 RNFT1Q5M7Z0 435 aa8□□□□□ -1.13
NUP88-202ENST00000570937 C1orf53Q5VUE5 145 aa8□□□□□ -1.13
NUP88-202ENST00000570937 SCG3Q8WXD2 468 aaKnown RBP8□□□□□ -1.13
NUP88-202ENST00000570937 ZIC5Q96T25 663 aa8□□□□□ -1.13
NUP88-202ENST00000570937 CFHR5Q9BXR6 569 aa8□□□□□ -1.13
NUP88-202ENST00000570937 ACIN1Q9UKV3 1341 aaKnown RBP8□□□□□ -1.13
NUP88-202ENST00000570937 PPP1R12BO60237 982 aaPredicted RBP7.99□□□□□ -1.13
NUP88-202ENST00000570937 PPP1R15AO75807 674 aaPredicted RBP7.99□□□□□ -1.13
NUP88-202ENST00000570937 WEE1P30291 646 aa7.99□□□□□ -1.13
NUP88-202ENST00000570937 FAM69CQ0P6D2 419 aa7.99□□□□□ -1.13
NUP88-202ENST00000570937 SH3PXD2AQ5TCZ1 1133 aa7.99□□□□□ -1.13
NUP88-202ENST00000570937 TRERF1Q96PN7 1200 aa7.99□□□□□ -1.13
NUP88-202ENST00000570937 ZNF232Q9UNY5 417 aa7.99□□□□□ -1.13
NUP88-202ENST00000570937 A0A1W2PNR3 127 aa7.98□□□□□ -1.13
NUP88-202ENST00000570937 GPR25O00155 361 aa7.98□□□□□ -1.13
NUP88-202ENST00000570937 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
NUP88-202ENST00000570937 FIGNL1Q6PIW4 674 aa7.98□□□□□ -1.13
NUP88-202ENST00000570937 STK32AQ8WU08 396 aa7.98□□□□□ -1.13
NUP88-202ENST00000570937 CNTNAP3BQ96NU0 1288 aa7.98□□□□□ -1.13
NUP88-202ENST00000570937 CNTNAP3Q9BZ76 1288 aa7.98□□□□□ -1.13
NUP88-202ENST00000570937 NDFIP2Q9NV92 336 aa7.98□□□□□ -1.13
NUP88-202ENST00000570937 SLURP2P0DP57 97 aa7.97□□□□□ -1.13
NUP88-202ENST00000570937 ARSJQ5FYB0 599 aaPredicted RBP7.97□□□□□ -1.13
NUP88-202ENST00000570937 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
NUP88-202ENST00000570937 MBIPQ9NS73 344 aa7.97□□□□□ -1.13
NUP88-202ENST00000570937 ATXN7L1Q9ULK2 861 aaPredicted RBP7.97□□□□□ -1.13
NUP88-202ENST00000570937 FOXO3O43524 673 aa7.96□□□□□ -1.14
NUP88-202ENST00000570937 SAMD5Q5TGI4 173 aa7.96□□□□□ -1.14
NUP88-202ENST00000570937 ZCCHC2Q9C0B9 1178 aaKnown RBP7.96□□□□□ -1.14
NUP88-202ENST00000570937 PHF24Q9UPV7 400 aa7.96□□□□□ -1.14
NUP88-202ENST00000570937 PCDHGC4Q9Y5F7 938 aa7.96□□□□□ -1.14
NUP88-202ENST00000570937 SRSF11Q05519 484 aaKnown RBP7.95□□□□□ -1.14
NUP88-202ENST00000570937 TMEM164Q5U3C3 297 aa7.95□□□□□ -1.14
NUP88-202ENST00000570937 BICDL1Q6ZP65 573 aa7.95□□□□□ -1.14
NUP88-202ENST00000570937 PHACTR1Q9C0D0 580 aa7.95□□□□□ -1.14
NUP88-202ENST00000570937 HCN4Q9Y3Q4 1203 aa7.95□□□□□ -1.14
NUP88-202ENST00000570937 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
NUP88-202ENST00000570937 BNIP3LO60238 219 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms