RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 CCDC146Q8IYE0 955 aa14.69□□□□□ -0.06
SMG6-206ENST00000570668 PNISRQ8TF01 805 aaKnown RBP14.69□□□□□ -0.06
SMG6-206ENST00000570668 THUMPD2Q9BTF0 503 aaKnown RBP14.69□□□□□ -0.06
SMG6-206ENST00000570668 UTRNP46939 3433 aa14.69□□□□□ -0.06
SMG6-206ENST00000570668 USP42Q9H9J4 1324 aaKnown RBP14.68□□□□□ -0.06
SMG6-206ENST00000570668 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
SMG6-206ENST00000570668 LMOD3Q0VAK6 560 aa14.68□□□□□ -0.06
SMG6-206ENST00000570668 ANP32CO43423 234 aa14.67□□□□□ -0.06
SMG6-206ENST00000570668 MMP10P09238 476 aa14.67□□□□□ -0.06
SMG6-206ENST00000570668 SNRPA1P09661 255 aaKnown RBP14.67□□□□□ -0.06
SMG6-206ENST00000570668 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
SMG6-206ENST00000570668 EIF5P55010 431 aaKnown RBP14.67□□□□□ -0.06
SMG6-206ENST00000570668 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
SMG6-206ENST00000570668 MIS18AQ9NYP9 233 aa14.67□□□□□ -0.06
SMG6-206ENST00000570668 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
SMG6-206ENST00000570668 CD2APQ9Y5K6 639 aa14.67□□□□□ -0.06
SMG6-206ENST00000570668 COL15A1P39059 1388 aa14.66□□□□□ -0.06
SMG6-206ENST00000570668 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
SMG6-206ENST00000570668 CCDC184Q52MB2 194 aa14.66□□□□□ -0.06
SMG6-206ENST00000570668 RRP7AQ9Y3A4 280 aaKnown RBP14.66□□□□□ -0.06
SMG6-206ENST00000570668 USP16Q9Y5T5 823 aa14.66□□□□□ -0.06
SMG6-206ENST00000570668 ZPR1O75312 459 aa14.65□□□□□ -0.06
SMG6-206ENST00000570668 A1BGP04217 495 aa14.65□□□□□ -0.06
SMG6-206ENST00000570668 IL6STP40189 918 aaPredicted RBP14.65□□□□□ -0.06
SMG6-206ENST00000570668 NLGN2Q8NFZ4 835 aa14.65□□□□□ -0.06
SMG6-206ENST00000570668 NARFQ9UHQ1 456 aa14.65□□□□□ -0.06
SMG6-206ENST00000570668 KDM3BQ7LBC6 1761 aa14.65□□□□□ -0.06
SMG6-206ENST00000570668 PRAMEF22A3QJZ6 481 aa14.64□□□□□ -0.07
SMG6-206ENST00000570668 EIF4A1P60842 406 aaKnown RBP14.64□□□□□ -0.07
SMG6-206ENST00000570668 FKBP8Q14318 412 aa14.64□□□□□ -0.07
SMG6-206ENST00000570668 NEUROD2Q15784 382 aa14.64□□□□□ -0.07
SMG6-206ENST00000570668 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
SMG6-206ENST00000570668 TRIM35Q9UPQ4 493 aa14.64□□□□□ -0.07
SMG6-206ENST00000570668 A0A087WZG4 1122 aa14.63□□□□□ -0.07
SMG6-206ENST00000570668 USPL1Q5W0Q7 1092 aa14.63□□□□□ -0.07
SMG6-206ENST00000570668 GIGYF1O75420 1035 aaPredicted RBP14.62□□□□□ -0.07
SMG6-206ENST00000570668 TM4SF1P30408 202 aa14.62□□□□□ -0.07
SMG6-206ENST00000570668 BCL2L12Q9HB09 334 aa14.62□□□□□ -0.07
SMG6-206ENST00000570668 TSPYL4Q9UJ04 414 aa14.62□□□□□ -0.07
SMG6-206ENST00000570668 PARP3Q9Y6F1 533 aa14.62□□□□□ -0.07
SMG6-206ENST00000570668 APAF1O14727 1248 aa14.61□□□□□ -0.07
SMG6-206ENST00000570668 MRS2Q9HD23 443 aa14.61□□□□□ -0.07
SMG6-206ENST00000570668 DDR1Q08345 913 aa14.6□□□□□ -0.07
SMG6-206ENST00000570668 NPM2Q86SE8 214 aaKnown RBP14.6□□□□□ -0.07
SMG6-206ENST00000570668 ZNF330Q9Y3S2 320 aaPredicted RBP14.6□□□□□ -0.07
SMG6-206ENST00000570668 C10orf71Q711Q0 1435 aa14.59□□□□□ -0.07
SMG6-206ENST00000570668 NBPF26B4DH59 902 aa14.59□□□□□ -0.07
SMG6-206ENST00000570668 POLRMTO00411 1230 aaKnown RBP14.59□□□□□ -0.07
SMG6-206ENST00000570668 CHL1O00533 1208 aa14.59□□□□□ -0.07
SMG6-206ENST00000570668 NFIXQ14938 502 aa14.59□□□□□ -0.07
SMG6-206ENST00000570668 NBPF10Q6P3W6 841 aaKnown RBP14.59□□□□□ -0.07
SMG6-206ENST00000570668 NBPF15Q8N660 670 aa14.59□□□□□ -0.07
SMG6-206ENST00000570668 TBC1D2BQ9UPU7 963 aa14.59□□□□□ -0.07
SMG6-206ENST00000570668 LAMB4A4D0S4 1761 aa14.59□□□□□ -0.07
SMG6-206ENST00000570668 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
SMG6-206ENST00000570668 PIP4K2AP48426 406 aaPredicted RBP14.58□□□□□ -0.08
SMG6-206ENST00000570668 GPR162Q16538 588 aa14.58□□□□□ -0.08
SMG6-206ENST00000570668 CAMTA2O94983 1202 aa14.57□□□□□ -0.08
SMG6-206ENST00000570668 TGFB2P61812 414 aa14.57□□□□□ -0.08
SMG6-206ENST00000570668 DZIP3Q86Y13 1208 aaKnown RBP14.57□□□□□ -0.08
SMG6-206ENST00000570668 SCN7AQ01118 1682 aa14.56□□□□□ -0.08
SMG6-206ENST00000570668 CFAP44Q96MT7 982 aa14.56□□□□□ -0.08
SMG6-206ENST00000570668 RGL2O15211 777 aa14.55□□□□□ -0.08
SMG6-206ENST00000570668 YBX3P16989 372 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMG6-206ENST00000570668 KCNA4P22459 653 aa14.55□□□□□ -0.08
SMG6-206ENST00000570668 CALD1Q05682 793 aaKnown RBP14.55□□□□□ -0.08
SMG6-206ENST00000570668 TBC1D9BQ66K14 1250 aa14.55□□□□□ -0.08
SMG6-206ENST00000570668 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
SMG6-206ENST00000570668 ERBB4Q15303 1308 aa14.55□□□□□ -0.08
SMG6-206ENST00000570668 PXDNLA1KZ92 1463 aa14.55□□□□□ -0.08
SMG6-206ENST00000570668 KIAA1551Q9HCM1 1747 aa14.55□□□□□ -0.08
SMG6-206ENST00000570668 GRIN3BO60391 1043 aa14.54□□□□□ -0.08
SMG6-206ENST00000570668 SERPINB2P05120 415 aa14.54□□□□□ -0.08
SMG6-206ENST00000570668 ZNF853P0CG23 659 aa14.54□□□□□ -0.08
SMG6-206ENST00000570668 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
SMG6-206ENST00000570668 CLEC4GQ6UXB4 293 aa14.54□□□□□ -0.08
SMG6-206ENST00000570668 LAS1LQ9Y4W2 734 aaKnown RBP14.54□□□□□ -0.08
SMG6-206ENST00000570668 NRXN2Q9P2S2 1712 aa14.54□□□□□ -0.08
SMG6-206ENST00000570668 AFDNP55196 1824 aaKnown RBP14.53□□□□□ -0.08
SMG6-206ENST00000570668 BCORQ6W2J9 1755 aa14.53□□□□□ -0.08
SMG6-206ENST00000570668 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
SMG6-206ENST00000570668 BICDL1Q6ZP65 573 aa14.53□□□□□ -0.08
SMG6-206ENST00000570668 IFT57Q9NWB7 429 aa14.53□□□□□ -0.08
SMG6-206ENST00000570668 CARMIL3Q8ND23 1372 aa14.52□□□□□ -0.08
SMG6-206ENST00000570668 A0A0G2JLW4 131 aa14.52□□□□□ -0.09
SMG6-206ENST00000570668 DPEP1P16444 411 aa14.52□□□□□ -0.09
SMG6-206ENST00000570668 GNAI1P63096 354 aa14.52□□□□□ -0.09
SMG6-206ENST00000570668 KRT24Q2M2I5 525 aa14.52□□□□□ -0.09
SMG6-206ENST00000570668 SETDB2Q96T68 719 aa14.52□□□□□ -0.09
SMG6-206ENST00000570668 MBIPQ9NS73 344 aa14.52□□□□□ -0.09
SMG6-206ENST00000570668 ZNF652Q9Y2D9 606 aa14.52□□□□□ -0.09
SMG6-206ENST00000570668 CHD4Q14839 1912 aa14.52□□□□□ -0.09
SMG6-206ENST00000570668 HOXB7P09629 217 aa14.51□□□□□ -0.09
SMG6-206ENST00000570668 MYL6BP14649 208 aa14.51□□□□□ -0.09
SMG6-206ENST00000570668 EIF2S2P20042 333 aaKnown RBP14.51□□□□□ -0.09
SMG6-206ENST00000570668 KCNA3P22001 575 aa14.51□□□□□ -0.09
SMG6-206ENST00000570668 YY1P25490 414 aa14.51□□□□□ -0.09
SMG6-206ENST00000570668 PDIA6Q15084 440 aa14.51□□□□□ -0.09
SMG6-206ENST00000570668 LRP10Q7Z4F1 713 aa14.51□□□□□ -0.09
SMG6-206ENST00000570668 N4BP2Q86UW6 1770 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms