RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 FSD2A1L4K1 749 aa10.02□□□□□ -0.81
TCF4-246ENST00000570287 LARGE2Q8N3Y3 721 aa10.02□□□□□ -0.81
TCF4-246ENST00000570287 CDK19Q9BWU1 502 aa10.02□□□□□ -0.81
TCF4-246ENST00000570287 U2AF1L5P0DN76 240 aaPredicted RBP10.02□□□□□ -0.81
TCF4-246ENST00000570287 U2AF1Q01081 240 aaKnown RBP eCLIP10.02□□□□□ -0.81
TCF4-246ENST00000570287 SF3A1Q15459 793 aaKnown RBP10.02□□□□□ -0.81
TCF4-246ENST00000570287 PCDHB15Q9Y5E8 787 aa10.02□□□□□ -0.81
TCF4-246ENST00000570287 COL3A1P02461 1466 aaPredicted RBP10.01□□□□□ -0.81
TCF4-246ENST00000570287 FYB1O15117 783 aa10.01□□□□□ -0.81
TCF4-246ENST00000570287 RRP7AQ9Y3A4 280 aaKnown RBP10.01□□□□□ -0.81
TCF4-246ENST00000570287 EVI5LQ96CN4 794 aa10.01□□□□□ -0.81
TCF4-246ENST00000570287 GGNBP2Q9H3C7 697 aa10.01□□□□□ -0.81
TCF4-246ENST00000570287 KIF13AQ9H1H9 1805 aa10□□□□□ -0.81
TCF4-246ENST00000570287 MAP3K13O43283 966 aa10□□□□□ -0.81
TCF4-246ENST00000570287 FTSJ3Q8IY81 847 aaKnown RBP10□□□□□ -0.81
TCF4-246ENST00000570287 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
TCF4-246ENST00000570287 ABCF1Q8NE71 845 aaKnown RBP eCLIP10□□□□□ -0.81
TCF4-246ENST00000570287 EPS8L1Q8TE68 723 aa10□□□□□ -0.81
TCF4-246ENST00000570287 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
TCF4-246ENST00000570287 PNNQ9H307 717 aaKnown RBP10□□□□□ -0.81
TCF4-246ENST00000570287 KIF20BQ96Q89 1820 aa10□□□□□ -0.81
TCF4-246ENST00000570287 MYH16Q9H6N6 1097 aa10□□□□□ -0.81
TCF4-246ENST00000570287 ATP7BP35670 1465 aa10□□□□□ -0.81
TCF4-246ENST00000570287 HDLBPQ00341 1268 aaKnown RBP10□□□□□ -0.81
TCF4-246ENST00000570287 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
TCF4-246ENST00000570287 FBXO33Q7Z6M2 555 aa10□□□□□ -0.81
TCF4-246ENST00000570287 RARSP54136 660 aaKnown RBP9.99□□□□□ -0.81
TCF4-246ENST00000570287 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
TCF4-246ENST00000570287 CNPY4Q8N129 248 aa9.99□□□□□ -0.81
TCF4-246ENST00000570287 MLECQ14165 292 aa9.99□□□□□ -0.81
TCF4-246ENST00000570287 CCDC144BQ3MJ40 725 aa9.99□□□□□ -0.81
TCF4-246ENST00000570287 CHADLQ6NUI6 762 aa9.99□□□□□ -0.81
TCF4-246ENST00000570287 CABP1Q9NZU7 370 aa9.99□□□□□ -0.81
TCF4-246ENST00000570287 NRXN3Q9Y4C0 1643 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 ZMYM3Q14202 1370 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 METTL3Q86U44 580 aaKnown RBP9.98□□□□□ -0.81
TCF4-246ENST00000570287 SPACA7Q96KW9 195 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 PLEKHF1Q96S99 279 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 ANO2Q9NQ90 1003 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 SSFA2P28290 1259 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 SPDYE1Q8NFV5 336 aaPredicted RBP9.98□□□□□ -0.81
TCF4-246ENST00000570287 CABLES1Q8TDN4 633 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 TRIM34Q9BYJ4 488 aa9.98□□□□□ -0.81
TCF4-246ENST00000570287 ESF1Q9H501 851 aaKnown RBP9.98□□□□□ -0.81
TCF4-246ENST00000570287 USP19O94966 1318 aa9.97□□□□□ -0.81
TCF4-246ENST00000570287 CT47B1P0C2W7 299 aaPredicted RBP9.97□□□□□ -0.81
TCF4-246ENST00000570287 XRCC6P12956 609 aaKnown RBP eCLIP9.97□□□□□ -0.81
TCF4-246ENST00000570287 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
TCF4-246ENST00000570287 ANTXR1Q9H6X2 564 aa9.97□□□□□ -0.81
TCF4-246ENST00000570287 PRDM4Q9UKN5 801 aa9.97□□□□□ -0.81
TCF4-246ENST00000570287 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
TCF4-246ENST00000570287 CALD1Q05682 793 aaKnown RBP9.97□□□□□ -0.81
TCF4-246ENST00000570287 RAD51AP2Q09MP3 1159 aa9.97□□□□□ -0.81
TCF4-246ENST00000570287 KNDC1Q76NI1 1749 aa9.97□□□□□ -0.81
TCF4-246ENST00000570287 WAPLQ7Z5K2 1190 aa9.97□□□□□ -0.81
TCF4-246ENST00000570287 PIK3R5Q8WYR1 880 aa9.97□□□□□ -0.81
TCF4-246ENST00000570287 U2SURPO15042 1029 aaKnown RBP9.96□□□□□ -0.81
TCF4-246ENST00000570287 GABBR1Q9UBS5 961 aa9.96□□□□□ -0.81
TCF4-246ENST00000570287 KCNG1Q9UIX4 513 aa9.96□□□□□ -0.81
TCF4-246ENST00000570287 CDC42BPGQ6DT37 1551 aa9.96□□□□□ -0.81
TCF4-246ENST00000570287 DIAPH1O60610 1272 aaKnown RBP9.96□□□□□ -0.82
TCF4-246ENST00000570287 ERCC3P19447 782 aa9.96□□□□□ -0.82
TCF4-246ENST00000570287 FOXD4L6Q3SYB3 417 aaPredicted RBP9.96□□□□□ -0.82
TCF4-246ENST00000570287 FOXD4L3Q6VB84 417 aaPredicted RBP9.96□□□□□ -0.82
TCF4-246ENST00000570287 FAM161BQ96MY7 647 aa9.96□□□□□ -0.82
TCF4-246ENST00000570287 MAPK8IP3Q9UPT6 1336 aa9.96□□□□□ -0.82
TCF4-246ENST00000570287 NDUFV2P19404 249 aa9.96□□□□□ -0.82
TCF4-246ENST00000570287 GTF2F1P35269 517 aaKnown RBP eCLIP9.96□□□□□ -0.82
TCF4-246ENST00000570287 TMPOP42166 694 aaKnown RBP9.96□□□□□ -0.82
TCF4-246ENST00000570287 LDLRAD1Q5T700 205 aa9.96□□□□□ -0.82
TCF4-246ENST00000570287 PLPP6Q8IY26 295 aa9.96□□□□□ -0.82
TCF4-246ENST00000570287 PDCL3Q9H2J4 239 aa9.96□□□□□ -0.82
TCF4-246ENST00000570287 IL16Q14005 1332 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 TECPR2O15040 1411 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 FAM135BQ49AJ0 1406 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 EGFLAMQ63HQ2 1017 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 SPIRE2Q8WWL2 714 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 WASLO00401 505 aaPredicted RBP9.95□□□□□ -0.82
TCF4-246ENST00000570287 GRIPAP1Q4V328 841 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 PANK1Q8TE04 598 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
TCF4-246ENST00000570287 METP08581 1390 aa9.94□□□□□ -0.82
TCF4-246ENST00000570287 TNRQ92752 1358 aa9.94□□□□□ -0.82
TCF4-246ENST00000570287 CPSF1Q10570 1443 aaKnown RBP9.94□□□□□ -0.82
TCF4-246ENST00000570287 EDC4Q6P2E9 1401 aaKnown RBP9.94□□□□□ -0.82
TCF4-246ENST00000570287 TNNI2P48788 182 aa9.94□□□□□ -0.82
TCF4-246ENST00000570287 SGSM3Q96HU1 749 aa9.94□□□□□ -0.82
TCF4-246ENST00000570287 NOVA2Q9UNW9 492 aaKnown RBP9.94□□□□□ -0.82
TCF4-246ENST00000570287 TRIM35Q9UPQ4 493 aa9.94□□□□□ -0.82
TCF4-246ENST00000570287 TPM2P07951 284 aa9.93□□□□□ -0.82
TCF4-246ENST00000570287 PSME1Q06323 249 aa9.93□□□□□ -0.82
TCF4-246ENST00000570287 CPS1P31327 1500 aa9.93□□□□□ -0.82
TCF4-246ENST00000570287 FOXK1P85037 733 aa9.93□□□□□ -0.82
TCF4-246ENST00000570287 TCEAL1Q15170 157 aa9.93□□□□□ -0.82
TCF4-246ENST00000570287 APBB1IPQ7Z5R6 666 aaPredicted RBP9.93□□□□□ -0.82
TCF4-246ENST00000570287 PPIP5K1Q6PFW1 1433 aa9.93□□□□□ -0.82
TCF4-246ENST00000570287 IGHDP01880 384 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms