RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 BCL2L12Q9HB09 334 aa12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-212ENST00000570129 SOS1Q07889 1333 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-212ENST00000570129 NEFMP07197 916 aa12.93□□□□□ -0.34
GTF3C1-212ENST00000570129 GYS1P13807 737 aa12.93□□□□□ -0.34
GTF3C1-212ENST00000570129 SSFA2P28290 1259 aa12.93□□□□□ -0.34
GTF3C1-212ENST00000570129 MIER1Q8N108 512 aa12.93□□□□□ -0.34
GTF3C1-212ENST00000570129 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
GTF3C1-212ENST00000570129 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-212ENST00000570129 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
GTF3C1-212ENST00000570129 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
GTF3C1-212ENST00000570129 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
GTF3C1-212ENST00000570129 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
GTF3C1-212ENST00000570129 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
GTF3C1-212ENST00000570129 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-212ENST00000570129 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
GTF3C1-212ENST00000570129 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
GTF3C1-212ENST00000570129 ZNF330Q9Y3S2 320 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-212ENST00000570129 CHL1O00533 1208 aa12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 ANXA1P04083 346 aa12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 NGEFQ8N5V2 710 aa12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 SYT17Q9BSW7 474 aa12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 TSPYL4Q9UJ04 414 aa12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 LRP5O75197 1615 aa12.91□□□□□ -0.34
GTF3C1-212ENST00000570129 MMP10P09238 476 aa12.9□□□□□ -0.34
GTF3C1-212ENST00000570129 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-212ENST00000570129 RFC4P35249 363 aa12.9□□□□□ -0.34
GTF3C1-212ENST00000570129 DDR1Q08345 913 aa12.9□□□□□ -0.34
GTF3C1-212ENST00000570129 PROSER3Q2NL68 480 aa12.9□□□□□ -0.34
GTF3C1-212ENST00000570129 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-212ENST00000570129 STARD3NLO95772 234 aa12.89□□□□□ -0.35
GTF3C1-212ENST00000570129 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
GTF3C1-212ENST00000570129 FLAD1Q8NFF5 587 aa12.89□□□□□ -0.35
GTF3C1-212ENST00000570129 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-212ENST00000570129 UBR2Q8IWV8 1755 aa12.89□□□□□ -0.35
GTF3C1-212ENST00000570129 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-212ENST00000570129 ZNF853P0CG23 659 aa12.88□□□□□ -0.35
GTF3C1-212ENST00000570129 EIF2S2P20042 333 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-212ENST00000570129 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
GTF3C1-212ENST00000570129 MBIPQ9NS73 344 aa12.88□□□□□ -0.35
GTF3C1-212ENST00000570129 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-212ENST00000570129 POLD1P28340 1107 aa12.87□□□□□ -0.35
GTF3C1-212ENST00000570129 TM4SF1P30408 202 aa12.87□□□□□ -0.35
GTF3C1-212ENST00000570129 PDIA6Q15084 440 aa12.87□□□□□ -0.35
GTF3C1-212ENST00000570129 DIEXFQ68CQ4 756 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-212ENST00000570129 TTLL7Q6ZT98 887 aa12.87□□□□□ -0.35
GTF3C1-212ENST00000570129 TSR2Q969E8 191 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-212ENST00000570129 ZNF428Q96B54 188 aa12.87□□□□□ -0.35
GTF3C1-212ENST00000570129 COL15A1P39059 1388 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 MYL6BP14649 208 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 NFIXQ14938 502 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 TBC1D9BQ66K14 1250 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 TSPYL6Q8N831 410 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 C8orf58Q8NAV2 365 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 NARFQ9UHQ1 456 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
GTF3C1-212ENST00000570129 QSER1Q2KHR3 1735 aa12.85□□□□□ -0.35
GTF3C1-212ENST00000570129 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-212ENST00000570129 CAMTA2O94983 1202 aa12.85□□□□□ -0.35
GTF3C1-212ENST00000570129 HLFQ16534 295 aa12.85□□□□□ -0.35
GTF3C1-212ENST00000570129 LRP10Q7Z4F1 713 aa12.85□□□□□ -0.35
GTF3C1-212ENST00000570129 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-212ENST00000570129 POLRMTO00411 1230 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-212ENST00000570129 ZPR1O75312 459 aa12.84□□□□□ -0.35
GTF3C1-212ENST00000570129 LMOD3Q0VAK6 560 aa12.84□□□□□ -0.35
GTF3C1-212ENST00000570129 NLGN1Q8N2Q7 840 aa12.84□□□□□ -0.35
GTF3C1-212ENST00000570129 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
GTF3C1-212ENST00000570129 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
GTF3C1-212ENST00000570129 IL6STP40189 918 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-212ENST00000570129 DZIP3Q86Y13 1208 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-212ENST00000570129 KDM3BQ7LBC6 1761 aa12.83□□□□□ -0.36
GTF3C1-212ENST00000570129 CICQ96RK0 1608 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-212ENST00000570129 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
GTF3C1-212ENST00000570129 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
GTF3C1-212ENST00000570129 PELP1Q8IZL8 1130 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-212ENST00000570129 C4AP0C0L4 1744 aa12.82□□□□□ -0.36
GTF3C1-212ENST00000570129 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
GTF3C1-212ENST00000570129 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
GTF3C1-212ENST00000570129 CHRNA5P30532 468 aa12.81□□□□□ -0.36
GTF3C1-212ENST00000570129 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
GTF3C1-212ENST00000570129 SERPINB2P05120 415 aa12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 DPEP1P16444 411 aa12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 KCNA3P22001 575 aa12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 KCNA4P22459 653 aa12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 AIMP1Q12904 312 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 ZBTB3Q9H5J0 574 aa12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 PARP3Q9Y6F1 533 aa12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 CARMIL3Q8ND23 1372 aa12.8□□□□□ -0.36
GTF3C1-212ENST00000570129 XAGE3Q8WTP9 111 aa12.79□□□□□ -0.36
GTF3C1-212ENST00000570129 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
GTF3C1-212ENST00000570129 A0A087WZG4 1122 aa12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 GPTP24298 496 aa12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 GNAI1P63096 354 aa12.78□□□□□ -0.36
GTF3C1-212ENST00000570129 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms