RNA–Protein interactions for RNA: ENST00000570015.1

CISTR-201, chondrogenesis-associated transcript, humanhuman

TSL 2 BASIC

Gene CISTR, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISTR-201ENST00000570015 TSPYL6Q8N831 410 aa15.16■□□□□ 0.02
CISTR-201ENST00000570015 USP16Q9Y5T5 823 aa15.16■□□□□ 0.02
CISTR-201ENST00000570015 TJP1Q07157 1748 aa15.16■□□□□ 0.02
CISTR-201ENST00000570015 PIP4K2AP48426 406 aaPredicted RBP15.15■□□□□ 0.02
CISTR-201ENST00000570015 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
CISTR-201ENST00000570015 TCERG1O14776 1098 aaKnown RBP15.14■□□□□ 0.01
CISTR-201ENST00000570015 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
CISTR-201ENST00000570015 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
CISTR-201ENST00000570015 A1BGP04217 495 aa15.13■□□□□ 0.01
CISTR-201ENST00000570015 CYP19A1P11511 503 aaPredicted RBP15.13■□□□□ 0.01
CISTR-201ENST00000570015 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
CISTR-201ENST00000570015 CRKLP46109 303 aaKnown RBP15.13■□□□□ 0.01
CISTR-201ENST00000570015 ZNF827Q17R98 1081 aa15.13■□□□□ 0.01
CISTR-201ENST00000570015 ALDH1L2Q3SY69 923 aa15.13■□□□□ 0.01
CISTR-201ENST00000570015 AK7Q96M32 723 aa15.13■□□□□ 0.01
CISTR-201ENST00000570015 TEX13AQ9BXU3 409 aaPredicted RBP15.13■□□□□ 0.01
CISTR-201ENST00000570015 ANO8Q9HCE9 1232 aaPredicted RBP15.13■□□□□ 0.01
CISTR-201ENST00000570015 STK32BQ9NY57 414 aa15.13■□□□□ 0.01
CISTR-201ENST00000570015 COL5A3P25940 1745 aaPredicted RBP15.12■□□□□ 0.01
CISTR-201ENST00000570015 STARD3NLO95772 234 aa15.12■□□□□ 0.01
CISTR-201ENST00000570015 RARSP54136 660 aaKnown RBP15.12■□□□□ 0.01
CISTR-201ENST00000570015 HDGFL1Q5TGJ6 251 aa15.12■□□□□ 0.01
CISTR-201ENST00000570015 ZNF330Q9Y3S2 320 aaPredicted RBP15.12■□□□□ 0.01
CISTR-201ENST00000570015 RREB1Q92766 1687 aa15.12■□□□□ 0.01
CISTR-201ENST00000570015 ERBB4Q15303 1308 aa15.12■□□□□ 0.01
CISTR-201ENST00000570015 GNPATO15228 680 aa15.11■□□□□ 0.01
CISTR-201ENST00000570015 PHF14O94880 888 aa15.11■□□□□ 0.01
CISTR-201ENST00000570015 BRPF1P55201 1214 aaPredicted RBP15.11■□□□□ 0.01
CISTR-201ENST00000570015 NBPF14Q5TI25 921 aa15.11■□□□□ 0.01
CISTR-201ENST00000570015 CCDC30Q5VVM6 783 aa15.11■□□□□ 0.01
CISTR-201ENST00000570015 INTS5Q6P9B9 1019 aaKnown RBP15.11■□□□□ 0.01
CISTR-201ENST00000570015 CCDC87Q9NVE4 849 aa15.11■□□□□ 0.01
CISTR-201ENST00000570015 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
CISTR-201ENST00000570015 MSH5O43196 834 aa15.1■□□□□ 0.01
CISTR-201ENST00000570015 ANXA1P04083 346 aa15.1■□□□□ 0.01
CISTR-201ENST00000570015 MYL6BP14649 208 aa15.1■□□□□ 0.01
CISTR-201ENST00000570015 ARXQ96QS3 562 aa15.1■□□□□ 0.01
CISTR-201ENST00000570015 ZBTB1Q9Y2K1 713 aa15.1■□□□□ 0.01
CISTR-201ENST00000570015 TAF1LQ8IZX4 1826 aa15.09■□□□□ 0.01
CISTR-201ENST00000570015 PSDA5PKW4 1024 aaPredicted RBP15.09■□□□□ 0.01
CISTR-201ENST00000570015 HMGB2P26583 209 aaKnown RBP15.09■□□□□ 0.01
CISTR-201ENST00000570015 AMIGO3Q86WK7 504 aa15.09■□□□□ 0.01
CISTR-201ENST00000570015 SSH1Q8WYL5 1049 aa15.09■□□□□ 0.01
CISTR-201ENST00000570015 AKT1S1Q96B36 256 aa15.09■□□□□ 0.01
CISTR-201ENST00000570015 NUP188Q5SRE5 1749 aa15.09■□□□□ 0.01
CISTR-201ENST00000570015 R3HDM1Q15032 1099 aaKnown RBP15.08■□□□□ 0
CISTR-201ENST00000570015 SLC15A2Q16348 729 aa15.08■□□□□ 0
CISTR-201ENST00000570015 PROSER3Q2NL68 480 aa15.08■□□□□ 0
CISTR-201ENST00000570015 STK31Q9BXU1 1019 aa15.08■□□□□ 0
CISTR-201ENST00000570015 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0
CISTR-201ENST00000570015 DBF4Q9UBU7 674 aaPredicted RBP15.08■□□□□ 0
CISTR-201ENST00000570015 KIF16BQ96L93 1317 aa15.08■□□□□ 0
CISTR-201ENST00000570015 CNTNAP4Q9C0A0 1308 aa15.08■□□□□ 0
CISTR-201ENST00000570015 C4BP0C0L5 1744 aa15.07■□□□□ 0
CISTR-201ENST00000570015 NBPF26B4DH59 902 aa15.07■□□□□ 0
CISTR-201ENST00000570015 RC3H1Q5TC82 1133 aaKnown RBP15.07■□□□□ 0
CISTR-201ENST00000570015 NBPF10Q6P3W6 841 aaKnown RBP15.07■□□□□ 0
CISTR-201ENST00000570015 NBPF15Q8N660 670 aa15.07■□□□□ 0
CISTR-201ENST00000570015 CHPF2Q9P2E5 772 aa15.07■□□□□ 0
CISTR-201ENST00000570015 RTCBQ9Y3I0 505 aaKnown RBP15.07■□□□□ 0
CISTR-201ENST00000570015 RNF123Q5XPI4 1314 aa15.07■□□□□ 0
CISTR-201ENST00000570015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
CISTR-201ENST00000570015 RPS6KA4O75676 772 aa15.06■□□□□ 0
CISTR-201ENST00000570015 DDX21Q9NR30 783 aaKnown RBP eCLIP15.06■□□□□ 0
CISTR-201ENST00000570015 BCAR3O75815 825 aa15.05■□□□□ -0
CISTR-201ENST00000570015 AIMP1Q12904 312 aaKnown RBP15.05■□□□□ -0
CISTR-201ENST00000570015 MRPL50Q8N5N7 158 aaKnown RBP15.05■□□□□ -0
CISTR-201ENST00000570015 BCL2L13Q9BXK5 485 aa15.05■□□□□ -0
CISTR-201ENST00000570015 HYPKQ9NX55 129 aa15.05■□□□□ -0
CISTR-201ENST00000570015 MYH14Q7Z406 1995 aaKnown RBP15.04■□□□□ -0
CISTR-201ENST00000570015 PDIA6Q15084 440 aa15.04■□□□□ -0
CISTR-201ENST00000570015 TRAPPC3LQ5T215 181 aa15.04■□□□□ -0
CISTR-201ENST00000570015 LRP10Q7Z4F1 713 aa15.04■□□□□ -0
CISTR-201ENST00000570015 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
CISTR-201ENST00000570015 COL23A1Q86Y22 540 aaPredicted RBP15.04■□□□□ -0
CISTR-201ENST00000570015 PDGFDQ9GZP0 370 aaPredicted RBP15.04■□□□□ -0
CISTR-201ENST00000570015 PTPRCP08575 1304 aa15.03■□□□□ -0
CISTR-201ENST00000570015 PNPLA7Q6ZV29 1317 aa15.03■□□□□ -0
CISTR-201ENST00000570015 SLC4A2P04920 1241 aa15.03■□□□□ -0
CISTR-201ENST00000570015 ARHGAP45Q92619 1136 aa15.03■□□□□ -0
CISTR-201ENST00000570015 ARHGEF1Q92888 912 aaKnown RBP15.03■□□□□ -0
CISTR-201ENST00000570015 SRP68Q9UHB9 627 aaKnown RBP15.03■□□□□ -0
CISTR-201ENST00000570015 TBC1D2BQ9UPU7 963 aa15.03■□□□□ -0
CISTR-201ENST00000570015 RFC4P35249 363 aa15.02■□□□□ -0
CISTR-201ENST00000570015 IL6STP40189 918 aaPredicted RBP15.02■□□□□ -0
CISTR-201ENST00000570015 EIF5P55010 431 aaKnown RBP15.02■□□□□ -0
CISTR-201ENST00000570015 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02■□□□□ -0
CISTR-201ENST00000570015 XAGE3Q8WTP9 111 aa15.02■□□□□ -0
CISTR-201ENST00000570015 COL15A1P39059 1388 aa15.01□□□□□ -0.01
CISTR-201ENST00000570015 IPO8O15397 1037 aaKnown RBP15.01□□□□□ -0.01
CISTR-201ENST00000570015 SSFA2P28290 1259 aa15.01□□□□□ -0.01
CISTR-201ENST00000570015 RRP1P56182 461 aaKnown RBP15.01□□□□□ -0.01
CISTR-201ENST00000570015 MSL1Q68DK7 614 aa15.01□□□□□ -0.01
CISTR-201ENST00000570015 TTLL7Q6ZT98 887 aa15.01□□□□□ -0.01
CISTR-201ENST00000570015 COPS6Q7L5N1 327 aa15.01□□□□□ -0.01
CISTR-201ENST00000570015 G2E3Q7L622 706 aa15.01□□□□□ -0.01
CISTR-201ENST00000570015 DZIP3Q86Y13 1208 aaKnown RBP15.01□□□□□ -0.01
CISTR-201ENST00000570015 PHAXQ9H814 394 aaKnown RBP15.01□□□□□ -0.01
CISTR-201ENST00000570015 A0A087WZG4 1122 aa15□□□□□ -0.01
CISTR-201ENST00000570015 FLIIQ13045 1269 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms