RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 APAF1O14727 1248 aa12.62□□□□□ -0.39
HCCAT5-201ENST00000569990 KCNQ3O43525 872 aa12.62□□□□□ -0.39
HCCAT5-201ENST00000569990 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
HCCAT5-201ENST00000569990 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
HCCAT5-201ENST00000569990 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
HCCAT5-201ENST00000569990 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
HCCAT5-201ENST00000569990 VSIG10Q8N0Z9 540 aa12.62□□□□□ -0.39
HCCAT5-201ENST00000569990 LRP5O75197 1615 aa12.62□□□□□ -0.39
HCCAT5-201ENST00000569990 HEG1Q9ULI3 1381 aa12.61□□□□□ -0.39
HCCAT5-201ENST00000569990 GNPATO15228 680 aa12.61□□□□□ -0.39
HCCAT5-201ENST00000569990 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
HCCAT5-201ENST00000569990 COL23A1Q86Y22 540 aaPredicted RBP12.61□□□□□ -0.39
HCCAT5-201ENST00000569990 DNAJC10Q8IXB1 793 aa12.61□□□□□ -0.39
HCCAT5-201ENST00000569990 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
HCCAT5-201ENST00000569990 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
HCCAT5-201ENST00000569990 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
HCCAT5-201ENST00000569990 SSFA2P28290 1259 aa12.6□□□□□ -0.39
HCCAT5-201ENST00000569990 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
HCCAT5-201ENST00000569990 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
HCCAT5-201ENST00000569990 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
HCCAT5-201ENST00000569990 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
HCCAT5-201ENST00000569990 SPON1Q9HCB6 807 aa12.6□□□□□ -0.39
HCCAT5-201ENST00000569990 MIS18AQ9NYP9 233 aa12.6□□□□□ -0.39
HCCAT5-201ENST00000569990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
HCCAT5-201ENST00000569990 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
HCCAT5-201ENST00000569990 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
HCCAT5-201ENST00000569990 MTFR1LQ9H019 292 aa12.59□□□□□ -0.39
HCCAT5-201ENST00000569990 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.39
HCCAT5-201ENST00000569990 RPS6KA4O75676 772 aa12.58□□□□□ -0.4
HCCAT5-201ENST00000569990 PHF14O94880 888 aa12.58□□□□□ -0.4
HCCAT5-201ENST00000569990 DIEXFQ68CQ4 756 aaKnown RBP12.58□□□□□ -0.4
HCCAT5-201ENST00000569990 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
HCCAT5-201ENST00000569990 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
HCCAT5-201ENST00000569990 RTCBQ9Y3I0 505 aaKnown RBP12.58□□□□□ -0.4
HCCAT5-201ENST00000569990 MYH14Q7Z406 1995 aaKnown RBP12.58□□□□□ -0.4
HCCAT5-201ENST00000569990 STARD3NLO95772 234 aa12.57□□□□□ -0.4
HCCAT5-201ENST00000569990 PTGER2P43116 358 aa12.57□□□□□ -0.4
HCCAT5-201ENST00000569990 FAM9BQ8IZU0 186 aa12.57□□□□□ -0.4
HCCAT5-201ENST00000569990 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
HCCAT5-201ENST00000569990 CCER2I3L3R5 266 aa12.56□□□□□ -0.4
HCCAT5-201ENST00000569990 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
HCCAT5-201ENST00000569990 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
HCCAT5-201ENST00000569990 SGIP1Q9BQI5 828 aa12.56□□□□□ -0.4
HCCAT5-201ENST00000569990 BABAM1Q9NWV8 329 aa12.56□□□□□ -0.4
HCCAT5-201ENST00000569990 TSPYL4Q9UJ04 414 aa12.56□□□□□ -0.4
HCCAT5-201ENST00000569990 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
HCCAT5-201ENST00000569990 COL24A1Q17RW2 1714 aa12.55□□□□□ -0.4
HCCAT5-201ENST00000569990 PRAMEF22A3QJZ6 481 aa12.55□□□□□ -0.4
HCCAT5-201ENST00000569990 EIF4A1P60842 406 aaKnown RBP12.55□□□□□ -0.4
HCCAT5-201ENST00000569990 TRAPPC3LQ5T215 181 aa12.55□□□□□ -0.4
HCCAT5-201ENST00000569990 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
HCCAT5-201ENST00000569990 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
HCCAT5-201ENST00000569990 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
HCCAT5-201ENST00000569990 CHL1O00533 1208 aa12.54□□□□□ -0.4
HCCAT5-201ENST00000569990 EVX2Q03828 476 aa12.54□□□□□ -0.4
HCCAT5-201ENST00000569990 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
HCCAT5-201ENST00000569990 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
HCCAT5-201ENST00000569990 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
HCCAT5-201ENST00000569990 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
HCCAT5-201ENST00000569990 A1BGP04217 495 aa12.53□□□□□ -0.4
HCCAT5-201ENST00000569990 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
HCCAT5-201ENST00000569990 CANXP27824 592 aaKnown RBP12.53□□□□□ -0.4
HCCAT5-201ENST00000569990 MSL1Q68DK7 614 aa12.53□□□□□ -0.4
HCCAT5-201ENST00000569990 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
HCCAT5-201ENST00000569990 LAS1LQ9Y4W2 734 aaKnown RBP12.53□□□□□ -0.4
HCCAT5-201ENST00000569990 ZNF853P0CG23 659 aa12.52□□□□□ -0.41
HCCAT5-201ENST00000569990 RFC4P35249 363 aa12.52□□□□□ -0.41
HCCAT5-201ENST00000569990 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.41
HCCAT5-201ENST00000569990 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.41
HCCAT5-201ENST00000569990 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
HCCAT5-201ENST00000569990 MIER1Q8N108 512 aa12.52□□□□□ -0.41
HCCAT5-201ENST00000569990 COL15A1P39059 1388 aa12.52□□□□□ -0.41
HCCAT5-201ENST00000569990 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
HCCAT5-201ENST00000569990 GYS1P13807 737 aa12.51□□□□□ -0.41
HCCAT5-201ENST00000569990 POLD1P28340 1107 aa12.51□□□□□ -0.41
HCCAT5-201ENST00000569990 IL6STP40189 918 aaPredicted RBP12.51□□□□□ -0.41
HCCAT5-201ENST00000569990 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
HCCAT5-201ENST00000569990 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
HCCAT5-201ENST00000569990 PPP1R1BQ9UD71 204 aaPredicted RBP12.51□□□□□ -0.41
HCCAT5-201ENST00000569990 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
HCCAT5-201ENST00000569990 ARXQ96QS3 562 aa12.5□□□□□ -0.41
HCCAT5-201ENST00000569990 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
HCCAT5-201ENST00000569990 SRP68Q9UHB9 627 aaKnown RBP12.5□□□□□ -0.41
HCCAT5-201ENST00000569990 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 GNAI1P63096 354 aa12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 SALL2Q9Y467 1007 aaPredicted RBP12.49□□□□□ -0.41
HCCAT5-201ENST00000569990 IL16Q14005 1332 aa12.48□□□□□ -0.41
HCCAT5-201ENST00000569990 A0A087WZG4 1122 aa12.48□□□□□ -0.41
HCCAT5-201ENST00000569990 ZPR1O75312 459 aa12.48□□□□□ -0.41
HCCAT5-201ENST00000569990 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
HCCAT5-201ENST00000569990 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
HCCAT5-201ENST00000569990 FKBP8Q14318 412 aa12.47□□□□□ -0.41
HCCAT5-201ENST00000569990 USPL1Q5W0Q7 1092 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms