RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 UNC5CLQ8IV45 518 aa6.7□□□□□ -1.34
CNOT1-219ENST00000569882 STRN4Q9NRL3 753 aa6.7□□□□□ -1.34
CNOT1-219ENST00000569882 POLR3AO14802 1390 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-219ENST00000569882 COL14A1Q05707 1796 aaKnown RBP6.69□□□□□ -1.34
CNOT1-219ENST00000569882 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
CNOT1-219ENST00000569882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.69□□□□□ -1.34
CNOT1-219ENST00000569882 SLC4A3P48751 1232 aa6.69□□□□□ -1.34
CNOT1-219ENST00000569882 INSM1Q01101 510 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-219ENST00000569882 PPP1R18Q6NYC8 613 aa6.69□□□□□ -1.34
CNOT1-219ENST00000569882 BLOC1S3Q6QNY0 202 aa6.69□□□□□ -1.34
CNOT1-219ENST00000569882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.69□□□□□ -1.34
CNOT1-219ENST00000569882 PHOX2BQ99453 314 aa6.69□□□□□ -1.34
CNOT1-219ENST00000569882 BTG4Q9NY30 223 aa6.69□□□□□ -1.34
CNOT1-219ENST00000569882 NWD2Q9ULI1 1742 aa6.69□□□□□ -1.34
CNOT1-219ENST00000569882 BRD4O60885 1362 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-219ENST00000569882 SBNO2Q9Y2G9 1366 aa6.69□□□□□ -1.34
CNOT1-219ENST00000569882 PHRF1Q9P1Y6 1649 aaKnown RBP6.68□□□□□ -1.34
CNOT1-219ENST00000569882 USP6P35125 1406 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.68□□□□□ -1.34
CNOT1-219ENST00000569882 AKAP12Q02952 1782 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 CFHP08603 1231 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 CSB-PGBD3P0DP91 1061 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
CNOT1-219ENST00000569882 CHRNA2Q15822 529 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 FNBP4Q8N3X1 1017 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-219ENST00000569882 NECTIN2Q92692 538 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 GJD4Q96KN9 370 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-219ENST00000569882 USP35Q9P2H5 1018 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 PCDHB3Q9Y5E6 796 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 TTC21AQ8NDW8 1320 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 KIAA0232Q92628 1395 aa6.68□□□□□ -1.34
CNOT1-219ENST00000569882 CDK12Q9NYV4 1490 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-219ENST00000569882 FAM83GA6ND36 823 aa6.67□□□□□ -1.34
CNOT1-219ENST00000569882 POTECB2RU33 542 aa6.67□□□□□ -1.34
CNOT1-219ENST00000569882 ZPR1O75312 459 aa6.67□□□□□ -1.34
CNOT1-219ENST00000569882 EIF4G2P78344 907 aaKnown RBP eCLIP6.67□□□□□ -1.34
CNOT1-219ENST00000569882 KCNH5Q8NCM2 988 aa6.67□□□□□ -1.34
CNOT1-219ENST00000569882 NINLQ9Y2I6 1382 aa6.67□□□□□ -1.34
CNOT1-219ENST00000569882 RGS12O14924 1447 aa6.67□□□□□ -1.34
CNOT1-219ENST00000569882 ATRNO75882 1429 aa6.67□□□□□ -1.34
CNOT1-219ENST00000569882 TLL1O43897 1013 aa6.66□□□□□ -1.34
CNOT1-219ENST00000569882 VPS72Q15906 364 aa6.66□□□□□ -1.34
CNOT1-219ENST00000569882 ERICH6Q7L0X2 663 aa6.66□□□□□ -1.34
CNOT1-219ENST00000569882 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.66□□□□□ -1.34
CNOT1-219ENST00000569882 MON2Q7Z3U7 1717 aa6.66□□□□□ -1.34
CNOT1-219ENST00000569882 BCL9LQ86UU0 1499 aa6.66□□□□□ -1.34
CNOT1-219ENST00000569882 SLIT2O94813 1529 aa6.66□□□□□ -1.34
CNOT1-219ENST00000569882 NRKQ7Z2Y5 1582 aa6.65□□□□□ -1.34
CNOT1-219ENST00000569882 CRYBG1Q9Y4K1 1723 aa6.65□□□□□ -1.34
CNOT1-219ENST00000569882 ACTN4O43707 911 aaKnown RBP6.65□□□□□ -1.34
CNOT1-219ENST00000569882 WFS1O76024 890 aa6.65□□□□□ -1.34
CNOT1-219ENST00000569882 GCP02774 474 aa6.65□□□□□ -1.34
CNOT1-219ENST00000569882 PRKCSHP14314 528 aaPredicted RBP6.65□□□□□ -1.34
CNOT1-219ENST00000569882 TOM1L2Q6ZVM7 507 aa6.65□□□□□ -1.34
CNOT1-219ENST00000569882 COG3Q96JB2 828 aa6.65□□□□□ -1.34
CNOT1-219ENST00000569882 PRR14Q9BWN1 585 aa6.65□□□□□ -1.34
CNOT1-219ENST00000569882 SLC12A5Q9H2X9 1139 aa6.65□□□□□ -1.34
CNOT1-219ENST00000569882 TTC21BQ7Z4L5 1316 aa6.65□□□□□ -1.35
CNOT1-219ENST00000569882 PIK3C2AO00443 1686 aa6.65□□□□□ -1.35
CNOT1-219ENST00000569882 DGAT1O75907 488 aa6.64□□□□□ -1.35
CNOT1-219ENST00000569882 GGCXP38435 758 aa6.64□□□□□ -1.35
CNOT1-219ENST00000569882 KMT5BQ4FZB7 885 aa6.64□□□□□ -1.35
CNOT1-219ENST00000569882 SEPT12Q8IYM1 358 aa6.64□□□□□ -1.35
CNOT1-219ENST00000569882 A0A1W2PP64 1363 aa6.64□□□□□ -1.35
CNOT1-219ENST00000569882 EDC4Q6P2E9 1401 aaKnown RBP6.64□□□□□ -1.35
CNOT1-219ENST00000569882 NRAPQ86VF7 1730 aa6.64□□□□□ -1.35
CNOT1-219ENST00000569882 LTN1O94822 1766 aa6.63□□□□□ -1.35
CNOT1-219ENST00000569882 USP19O94966 1318 aa6.63□□□□□ -1.35
CNOT1-219ENST00000569882 PDE3BQ13370 1112 aa6.63□□□□□ -1.35
CNOT1-219ENST00000569882 PUS10Q3MIT2 529 aaKnown RBP6.63□□□□□ -1.35
CNOT1-219ENST00000569882 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-219ENST00000569882 KRT27Q7Z3Y8 459 aa6.63□□□□□ -1.35
CNOT1-219ENST00000569882 NME9Q86XW9 330 aa6.63□□□□□ -1.35
CNOT1-219ENST00000569882 KAT6BQ8WYB5 2073 aa6.63□□□□□ -1.35
CNOT1-219ENST00000569882 PUS7Q96PZ0 661 aaKnown RBP6.63□□□□□ -1.35
CNOT1-219ENST00000569882 BRWD3Q6RI45 1802 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 KIF20BQ96Q89 1820 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 GLI3P10071 1580 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 CPSF1Q10570 1443 aaKnown RBP6.62□□□□□ -1.35
CNOT1-219ENST00000569882 SSH2Q76I76 1423 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 CPDO75976 1380 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 ANKRD36BQ8N2N9 1353 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 SPATA31A5Q5VU36 1347 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 SPATA31A7Q8IWB4 1347 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 DDX11L8A8MPP1 907 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 AMPHP49418 695 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 TCP11L2Q8N4U5 519 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 RDH13Q8NBN7 331 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 TESK2Q96S53 571 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 RGPD5Q99666 1765 aa6.62□□□□□ -1.35
CNOT1-219ENST00000569882 SLIT3O75094 1523 aa6.61□□□□□ -1.35
CNOT1-219ENST00000569882 AATKQ6ZMQ8 1374 aa6.61□□□□□ -1.35
CNOT1-219ENST00000569882 HSPA5P11021 654 aaKnown RBP6.61□□□□□ -1.35
CNOT1-219ENST00000569882 LARP1Q6PKG0 1096 aaKnown RBP6.61□□□□□ -1.35
CNOT1-219ENST00000569882 LTV1Q96GA3 475 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-219ENST00000569882 NLRP2Q9NX02 1062 aa6.61□□□□□ -1.35
CNOT1-219ENST00000569882 CRB1P82279 1406 aa6.6□□□□□ -1.35
CNOT1-219ENST00000569882 SMG6Q86US8 1419 aaKnown RBP6.6□□□□□ -1.35
CNOT1-219ENST00000569882 CGNL1Q0VF96 1302 aa6.6□□□□□ -1.35
CNOT1-219ENST00000569882 SPATA31A1Q5TZJ5 1347 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms