RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GOLIM4O00461 696 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 ARHGEF6Q15052 776 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 GPATCH3Q96I76 525 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 RTCBQ9Y3I0 505 aaKnown RBP8.18□□□□□ -1.1
SMG1-217ENST00000569764 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
SMG1-217ENST00000569764 NRXN3Q9Y4C0 1643 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 PLEKHG3A1L390 1219 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 IFNL2Q8IZJ0 200 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 SERPINA10Q9UK55 444 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 LRRC7Q96NW7 1537 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 GTPBP6O43824 516 aaPredicted RBP8.18□□□□□ -1.1
SMG1-217ENST00000569764 ZNF500O60304 480 aaPredicted RBP8.18□□□□□ -1.1
SMG1-217ENST00000569764 NLGN1Q8N2Q7 840 aa8.18□□□□□ -1.1
SMG1-217ENST00000569764 ISY1Q9ULR0 285 aaKnown RBP8.18□□□□□ -1.1
SMG1-217ENST00000569764 SLC4A2P04920 1241 aa8.17□□□□□ -1.1
SMG1-217ENST00000569764 CHRNA2Q15822 529 aa8.17□□□□□ -1.1
SMG1-217ENST00000569764 FNBP4Q8N3X1 1017 aaPredicted RBP8.17□□□□□ -1.1
SMG1-217ENST00000569764 UPF1Q92900 1129 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMG1-217ENST00000569764 CARD10Q9BWT7 1032 aa8.17□□□□□ -1.1
SMG1-217ENST00000569764 SLIT1O75093 1534 aa8.17□□□□□ -1.1
SMG1-217ENST00000569764 TNS3Q68CZ2 1445 aa8.17□□□□□ -1.1
SMG1-217ENST00000569764 TRIM37O94972 964 aa8.17□□□□□ -1.1
SMG1-217ENST00000569764 CCNL1Q9UK58 526 aaPredicted RBP8.17□□□□□ -1.1
SMG1-217ENST00000569764 ALKQ9UM73 1620 aa8.17□□□□□ -1.1
SMG1-217ENST00000569764 LMOD1P29536 600 aaPredicted RBP8.16□□□□□ -1.1
SMG1-217ENST00000569764 PPP2R1AP30153 589 aa8.16□□□□□ -1.1
SMG1-217ENST00000569764 POLR3AO14802 1390 aaPredicted RBP8.16□□□□□ -1.1
SMG1-217ENST00000569764 DNTTIP2Q5QJE6 756 aaKnown RBP8.16□□□□□ -1.1
SMG1-217ENST00000569764 EGFL6Q8IUX8 553 aa8.16□□□□□ -1.1
SMG1-217ENST00000569764 CDCA7LQ96GN5 454 aa8.16□□□□□ -1.1
SMG1-217ENST00000569764 C1orf167Q5SNV9 1468 aa8.16□□□□□ -1.1
SMG1-217ENST00000569764 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
SMG1-217ENST00000569764 KIF6Q6ZMV9 814 aa8.16□□□□□ -1.1
SMG1-217ENST00000569764 KCNQ2O43526 872 aa8.15□□□□□ -1.1
SMG1-217ENST00000569764 ST5P78524 1137 aa8.15□□□□□ -1.1
SMG1-217ENST00000569764 ANKRD24Q8TF21 1146 aa8.15□□□□□ -1.1
SMG1-217ENST00000569764 ADAMTS8Q9UP79 889 aa8.15□□□□□ -1.1
SMG1-217ENST00000569764 TTC21BQ7Z4L5 1316 aa8.15□□□□□ -1.1
SMG1-217ENST00000569764 KDM2BQ8NHM5 1336 aa8.15□□□□□ -1.1
SMG1-217ENST00000569764 ARHGAP23Q9P227 1491 aa8.15□□□□□ -1.1
SMG1-217ENST00000569764 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG1-217ENST00000569764 PLEKHH1Q9ULM0 1364 aa8.15□□□□□ -1.1
SMG1-217ENST00000569764 HSP90AA1P07900 732 aaKnown RBP8.15□□□□□ -1.11
SMG1-217ENST00000569764 ERCC3P19447 782 aa8.15□□□□□ -1.11
SMG1-217ENST00000569764 PNPLA6Q8IY17 1366 aa8.15□□□□□ -1.11
SMG1-217ENST00000569764 PCDH11XQ9BZA7 1347 aa8.15□□□□□ -1.11
SMG1-217ENST00000569764 PCDH11YQ9BZA8 1340 aa8.15□□□□□ -1.11
SMG1-217ENST00000569764 IRF6O14896 467 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 TNNT2P45379 298 aaPredicted RBP8.14□□□□□ -1.11
SMG1-217ENST00000569764 HMGB1P1B2RPK0 211 aaPredicted RBP8.14□□□□□ -1.11
SMG1-217ENST00000569764 NRDCO43847 1150 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 DDX58O95786 925 aaKnown RBP8.14□□□□□ -1.11
SMG1-217ENST00000569764 NBPF20Q3BBV1 942 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 SBNO2Q9Y2G9 1366 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 ZC3H4Q9UPT8 1303 aaKnown RBP8.14□□□□□ -1.11
SMG1-217ENST00000569764 PPIP5K1Q6PFW1 1433 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 CCDC189A1A4V9 331 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 ATXN8OSP0DMR3 200 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 TCF3P15923 654 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 TERF1P54274 439 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 TRAPPC3LQ5T215 181 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 GIGYF1O75420 1035 aaPredicted RBP8.14□□□□□ -1.11
SMG1-217ENST00000569764 R3HDM1Q15032 1099 aaKnown RBP8.14□□□□□ -1.11
SMG1-217ENST00000569764 ZNF530Q6P9A1 599 aaPredicted RBP8.14□□□□□ -1.11
SMG1-217ENST00000569764 MTFR1LQ9H019 292 aa8.14□□□□□ -1.11
SMG1-217ENST00000569764 SCP2P22307 547 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 MTHFSP49914 203 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 JDP2Q8WYK2 163 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 OVOS2A0A0G2JMS6 1433 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 OVOS2A0A0J9YW53 1432 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 OVOS2Q6IE36 1432 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 CD163L1Q9NR16 1453 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 CALRP27797 417 aaKnown RBP8.13□□□□□ -1.11
SMG1-217ENST00000569764 HSP90AB3PQ58FF7 597 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 RBM19Q9Y4C8 960 aaKnown RBP8.13□□□□□ -1.11
SMG1-217ENST00000569764 METP08581 1390 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 hCG_2014768A0A024R1R8 64 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 MMP14P50281 582 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 HDAC1Q13547 482 aaPredicted RBP8.13□□□□□ -1.11
SMG1-217ENST00000569764 POTEAQ6S8J7 498 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 PROCA1Q8NCQ7 364 aaPredicted RBP8.13□□□□□ -1.11
SMG1-217ENST00000569764 STK31Q9BXU1 1019 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 UBR1Q8IWV7 1749 aa8.13□□□□□ -1.11
SMG1-217ENST00000569764 SHPRHQ149N8 1683 aa8.12□□□□□ -1.11
SMG1-217ENST00000569764 ZMYND10O75800 440 aa8.12□□□□□ -1.11
SMG1-217ENST00000569764 TRIM44Q96DX7 344 aaPredicted RBP8.12□□□□□ -1.11
SMG1-217ENST00000569764 CDK12Q9NYV4 1490 aaPredicted RBP8.12□□□□□ -1.11
SMG1-217ENST00000569764 NF2P35240 595 aa8.12□□□□□ -1.11
SMG1-217ENST00000569764 SSR1P43307 286 aaKnown RBP8.12□□□□□ -1.11
SMG1-217ENST00000569764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.12□□□□□ -1.112e-8■■■■□ 21.3
SMG1-217ENST00000569764 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
SMG1-217ENST00000569764 NEXNQ0ZGT2 675 aa8.12□□□□□ -1.11
SMG1-217ENST00000569764 OTUD6BQ8N6M0 293 aa8.12□□□□□ -1.11
SMG1-217ENST00000569764 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
SMG1-217ENST00000569764 ATP7BP35670 1465 aa8.11□□□□□ -1.11
SMG1-217ENST00000569764 CT47B1P0C2W7 299 aaPredicted RBP8.11□□□□□ -1.11
SMG1-217ENST00000569764 FBLN1P23142 703 aa8.11□□□□□ -1.11
SMG1-217ENST00000569764 DPH6Q7L8W6 267 aa8.11□□□□□ -1.11
SMG1-217ENST00000569764 SUPT20HQ8NEM7 779 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms