RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
CNEP1R1-211ENST00000569647 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
CNEP1R1-211ENST00000569647 TRAPPC3LQ5T215 181 aa16.86■□□□□ 0.29
CNEP1R1-211ENST00000569647 RPS6KA4O75676 772 aa16.85■□□□□ 0.29
CNEP1R1-211ENST00000569647 ADRA2BP18089 450 aa16.85■□□□□ 0.29
CNEP1R1-211ENST00000569647 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
CNEP1R1-211ENST00000569647 WWC1Q8IX03 1113 aa16.85■□□□□ 0.29
CNEP1R1-211ENST00000569647 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
CNEP1R1-211ENST00000569647 TAF7Q15545 349 aaPredicted RBP16.84■□□□□ 0.29
CNEP1R1-211ENST00000569647 GPR162Q16538 588 aa16.84■□□□□ 0.29
CNEP1R1-211ENST00000569647 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
CNEP1R1-211ENST00000569647 ZNF521Q96K83 1311 aa16.83■□□□□ 0.28
CNEP1R1-211ENST00000569647 CD2APQ9Y5K6 639 aa16.83■□□□□ 0.28
CNEP1R1-211ENST00000569647 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
CNEP1R1-211ENST00000569647 SALL2Q9Y467 1007 aaPredicted RBP16.82■□□□□ 0.28
CNEP1R1-211ENST00000569647 BTBD11A6QL63 1104 aa16.81■□□□□ 0.28
CNEP1R1-211ENST00000569647 RFC4P35249 363 aa16.81■□□□□ 0.28
CNEP1R1-211ENST00000569647 INTS5Q6P9B9 1019 aaKnown RBP16.81■□□□□ 0.28
CNEP1R1-211ENST00000569647 ZNF790Q6PG37 636 aa16.81■□□□□ 0.28
CNEP1R1-211ENST00000569647 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
CNEP1R1-211ENST00000569647 KIAA1551Q9HCM1 1747 aa16.8■□□□□ 0.28
CNEP1R1-211ENST00000569647 MMP10P09238 476 aa16.8■□□□□ 0.28
CNEP1R1-211ENST00000569647 ZNF853P0CG23 659 aa16.8■□□□□ 0.28
CNEP1R1-211ENST00000569647 GYS1P13807 737 aa16.8■□□□□ 0.28
CNEP1R1-211ENST00000569647 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
CNEP1R1-211ENST00000569647 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
CNEP1R1-211ENST00000569647 BABAM1Q9NWV8 329 aa16.8■□□□□ 0.28
CNEP1R1-211ENST00000569647 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 IL16Q14005 1332 aa16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 CHL1O00533 1208 aa16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 KCNQ3O43525 872 aa16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 NLGN1Q8N2Q7 840 aa16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 CCDC87Q9NVE4 849 aa16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 IFT57Q9NWB7 429 aa16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 MIS18AQ9NYP9 233 aa16.79■□□□□ 0.28
CNEP1R1-211ENST00000569647 YBX3P16989 372 aaKnown RBP eCLIP16.78■□□□□ 0.28
CNEP1R1-211ENST00000569647 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
CNEP1R1-211ENST00000569647 TTC5Q8N0Z6 440 aa16.78■□□□□ 0.28
CNEP1R1-211ENST00000569647 SOS1Q07889 1333 aaPredicted RBP16.77■□□□□ 0.28
CNEP1R1-211ENST00000569647 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
CNEP1R1-211ENST00000569647 HNRNPUQ00839 825 aaKnown RBP eCLIP16.77■□□□□ 0.28
CNEP1R1-211ENST00000569647 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.28
CNEP1R1-211ENST00000569647 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.28
CNEP1R1-211ENST00000569647 TSPYL4Q9UJ04 414 aa16.77■□□□□ 0.28
CNEP1R1-211ENST00000569647 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.27
CNEP1R1-211ENST00000569647 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.27
CNEP1R1-211ENST00000569647 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
CNEP1R1-211ENST00000569647 GNAI1P63096 354 aa16.76■□□□□ 0.27
CNEP1R1-211ENST00000569647 ZBTB1Q9Y2K1 713 aa16.76■□□□□ 0.27
CNEP1R1-211ENST00000569647 AFDNP55196 1824 aaKnown RBP16.75■□□□□ 0.27
CNEP1R1-211ENST00000569647 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
CNEP1R1-211ENST00000569647 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
CNEP1R1-211ENST00000569647 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
CNEP1R1-211ENST00000569647 C10orf71Q711Q0 1435 aa16.75■□□□□ 0.27
CNEP1R1-211ENST00000569647 COL15A1P39059 1388 aa16.75■□□□□ 0.27
CNEP1R1-211ENST00000569647 FKBP8Q14318 412 aa16.74■□□□□ 0.27
CNEP1R1-211ENST00000569647 FMNL2Q96PY5 1086 aa16.74■□□□□ 0.27
CNEP1R1-211ENST00000569647 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
CNEP1R1-211ENST00000569647 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
CNEP1R1-211ENST00000569647 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
CNEP1R1-211ENST00000569647 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
CNEP1R1-211ENST00000569647 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
CNEP1R1-211ENST00000569647 ZPR1O75312 459 aa16.72■□□□□ 0.27
CNEP1R1-211ENST00000569647 STARD3NLO95772 234 aa16.72■□□□□ 0.27
CNEP1R1-211ENST00000569647 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
CNEP1R1-211ENST00000569647 ZNF784Q8NCA9 323 aaPredicted RBP16.72■□□□□ 0.27
CNEP1R1-211ENST00000569647 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.27
CNEP1R1-211ENST00000569647 CANXP27824 592 aaKnown RBP16.71■□□□□ 0.27
CNEP1R1-211ENST00000569647 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
CNEP1R1-211ENST00000569647 TSR2Q969E8 191 aaKnown RBP16.71■□□□□ 0.27
CNEP1R1-211ENST00000569647 WWC3Q9ULE0 1092 aa16.71■□□□□ 0.27
CNEP1R1-211ENST00000569647 SCN7AQ01118 1682 aa16.71■□□□□ 0.27
CNEP1R1-211ENST00000569647 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
CNEP1R1-211ENST00000569647 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
CNEP1R1-211ENST00000569647 DDR1Q08345 913 aa16.7■□□□□ 0.26
CNEP1R1-211ENST00000569647 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
CNEP1R1-211ENST00000569647 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
CNEP1R1-211ENST00000569647 ARFGEF1Q9Y6D6 1849 aa16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 E9PSI1 815 aa16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 EIF5P55010 431 aaKnown RBP16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 TGFB2P61812 414 aa16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 SLFN5Q08AF3 891 aa16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 KRT24Q2M2I5 525 aa16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
CNEP1R1-211ENST00000569647 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
CNEP1R1-211ENST00000569647 TM4SF1P30408 202 aa16.68■□□□□ 0.26
CNEP1R1-211ENST00000569647 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
CNEP1R1-211ENST00000569647 CDCA7LQ96GN5 454 aa16.68■□□□□ 0.26
CNEP1R1-211ENST00000569647 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
CNEP1R1-211ENST00000569647 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
CNEP1R1-211ENST00000569647 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
CNEP1R1-211ENST00000569647 A1BGP04217 495 aa16.66■□□□□ 0.26
CNEP1R1-211ENST00000569647 HOXB7P09629 217 aa16.66■□□□□ 0.26
CNEP1R1-211ENST00000569647 NFIXQ14938 502 aa16.66■□□□□ 0.26
CNEP1R1-211ENST00000569647 C8orf58Q8NAV2 365 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms