RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 RGPD4Q7Z3J3 1758 aa16.04■□□□□ 0.16
EDC3-217ENST00000569606 RREB1Q92766 1687 aa16.04■□□□□ 0.16
EDC3-217ENST00000569606 ATP6V1AP38606 617 aa16.03■□□□□ 0.16
EDC3-217ENST00000569606 ITPK1Q13572 414 aa16.03■□□□□ 0.16
EDC3-217ENST00000569606 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
EDC3-217ENST00000569606 CHPF2Q9P2E5 772 aa16.03■□□□□ 0.16
EDC3-217ENST00000569606 ERBB4Q15303 1308 aa16.02■□□□□ 0.16
EDC3-217ENST00000569606 SLC4A2P04920 1241 aa16.02■□□□□ 0.16
EDC3-217ENST00000569606 CYP19A1P11511 503 aaPredicted RBP16.02■□□□□ 0.16
EDC3-217ENST00000569606 PDIA6Q15084 440 aa16.02■□□□□ 0.16
EDC3-217ENST00000569606 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
EDC3-217ENST00000569606 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
EDC3-217ENST00000569606 PLSCR1O15162 318 aa16.01■□□□□ 0.15
EDC3-217ENST00000569606 STARD3NLO95772 234 aa16.01■□□□□ 0.15
EDC3-217ENST00000569606 APBA3O96018 575 aa16.01■□□□□ 0.15
EDC3-217ENST00000569606 RRP1P56182 461 aaKnown RBP16.01■□□□□ 0.15
EDC3-217ENST00000569606 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
EDC3-217ENST00000569606 CCNL1Q9UK58 526 aaPredicted RBP16.01■□□□□ 0.15
EDC3-217ENST00000569606 EP400Q96L91 3159 aa16.01■□□□□ 0.15
EDC3-217ENST00000569606 ANXA1P04083 346 aa16■□□□□ 0.15
EDC3-217ENST00000569606 A1BGP04217 495 aa16■□□□□ 0.15
EDC3-217ENST00000569606 KCNQ4P56696 695 aa16■□□□□ 0.15
EDC3-217ENST00000569606 PROSER3Q2NL68 480 aa16■□□□□ 0.15
EDC3-217ENST00000569606 MYH14Q7Z406 1995 aaKnown RBP16■□□□□ 0.15
EDC3-217ENST00000569606 NBPF26B4DH59 902 aa15.99■□□□□ 0.15
EDC3-217ENST00000569606 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
EDC3-217ENST00000569606 NBPF10Q6P3W6 841 aaKnown RBP15.99■□□□□ 0.15
EDC3-217ENST00000569606 G2E3Q7L622 706 aa15.99■□□□□ 0.15
EDC3-217ENST00000569606 LRP10Q7Z4F1 713 aa15.99■□□□□ 0.15
EDC3-217ENST00000569606 NBPF15Q8N660 670 aa15.99■□□□□ 0.15
EDC3-217ENST00000569606 LINC00116Q8NCU8 138 aa15.99■□□□□ 0.15
EDC3-217ENST00000569606 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
EDC3-217ENST00000569606 PLIN1O60240 522 aa15.98■□□□□ 0.15
EDC3-217ENST00000569606 C4BP0C0L5 1744 aa15.98■□□□□ 0.15
EDC3-217ENST00000569606 PIP4K2AP48426 406 aaPredicted RBP15.98■□□□□ 0.15
EDC3-217ENST00000569606 PROM2Q8N271 834 aa15.98■□□□□ 0.15
EDC3-217ENST00000569606 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.98■□□□□ 0.15
EDC3-217ENST00000569606 FRAT1Q92837 279 aaPredicted RBP15.98■□□□□ 0.15
EDC3-217ENST00000569606 PHAXQ9H814 394 aaKnown RBP15.98■□□□□ 0.15
EDC3-217ENST00000569606 LRRC4BQ9NT99 713 aa15.98■□□□□ 0.15
EDC3-217ENST00000569606 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
EDC3-217ENST00000569606 MYL6BP14649 208 aa15.97■□□□□ 0.15
EDC3-217ENST00000569606 CRKLP46109 303 aaKnown RBP15.97■□□□□ 0.15
EDC3-217ENST00000569606 FLIIQ13045 1269 aa15.97■□□□□ 0.15
EDC3-217ENST00000569606 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
EDC3-217ENST00000569606 SLC27A3Q5K4L6 730 aa15.97■□□□□ 0.15
EDC3-217ENST00000569606 ZKSCAN2Q63HK3 967 aa15.97■□□□□ 0.15
EDC3-217ENST00000569606 INTS5Q6P9B9 1019 aaKnown RBP15.97■□□□□ 0.15
EDC3-217ENST00000569606 CCDC87Q9NVE4 849 aa15.97■□□□□ 0.15
EDC3-217ENST00000569606 ZBTB1Q9Y2K1 713 aa15.97■□□□□ 0.15
EDC3-217ENST00000569606 PTPRCP08575 1304 aa15.96■□□□□ 0.15
EDC3-217ENST00000569606 CNTNAP4Q9C0A0 1308 aa15.96■□□□□ 0.15
EDC3-217ENST00000569606 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
EDC3-217ENST00000569606 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
EDC3-217ENST00000569606 ARHGAP45Q92619 1136 aa15.96■□□□□ 0.15
EDC3-217ENST00000569606 TRIM27P14373 513 aa15.95■□□□□ 0.14
EDC3-217ENST00000569606 RC3H1Q5TC82 1133 aaKnown RBP15.95■□□□□ 0.14
EDC3-217ENST00000569606 ATF7IPQ6VMQ6 1270 aa15.95■□□□□ 0.14
EDC3-217ENST00000569606 TNNQ9UQP3 1299 aa15.95■□□□□ 0.14
EDC3-217ENST00000569606 SF3B2Q13435 895 aaKnown RBP15.94■□□□□ 0.14
EDC3-217ENST00000569606 XAGE3Q8WTP9 111 aa15.94■□□□□ 0.14
EDC3-217ENST00000569606 NUP188Q5SRE5 1749 aa15.94■□□□□ 0.14
EDC3-217ENST00000569606 N4BP2Q86UW6 1770 aaPredicted RBP15.93■□□□□ 0.14
EDC3-217ENST00000569606 ARFGEF2Q9Y6D5 1785 aa15.93■□□□□ 0.14
EDC3-217ENST00000569606 IL6STP40189 918 aaPredicted RBP15.93■□□□□ 0.14
EDC3-217ENST00000569606 EN1Q05925 392 aaPredicted RBP15.93■□□□□ 0.14
EDC3-217ENST00000569606 FKBP5Q13451 457 aaPredicted RBP15.93■□□□□ 0.14
EDC3-217ENST00000569606 COPS6Q7L5N1 327 aa15.93■□□□□ 0.14
EDC3-217ENST00000569606 CCDC125Q86Z20 511 aa15.93■□□□□ 0.14
EDC3-217ENST00000569606 CAMKK2Q96RR4 588 aa15.93■□□□□ 0.14
EDC3-217ENST00000569606 API5Q9BZZ5 524 aaKnown RBP15.93■□□□□ 0.14
EDC3-217ENST00000569606 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
EDC3-217ENST00000569606 BAG6P46379 1132 aa15.92■□□□□ 0.14
EDC3-217ENST00000569606 EIF5P55010 431 aaKnown RBP15.92■□□□□ 0.14
EDC3-217ENST00000569606 AIMP1Q12904 312 aaKnown RBP15.92■□□□□ 0.14
EDC3-217ENST00000569606 PDE3AQ14432 1141 aa15.92■□□□□ 0.14
EDC3-217ENST00000569606 EZH2Q15910 746 aaKnown RBP15.92■□□□□ 0.14
EDC3-217ENST00000569606 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
EDC3-217ENST00000569606 ADCY9O60503 1353 aa15.91■□□□□ 0.14
EDC3-217ENST00000569606 RPS6KA4O75676 772 aa15.91■□□□□ 0.14
EDC3-217ENST00000569606 RLBP1P12271 317 aa15.91■□□□□ 0.14
EDC3-217ENST00000569606 HMGB2P26583 209 aaKnown RBP15.91■□□□□ 0.14
EDC3-217ENST00000569606 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
EDC3-217ENST00000569606 ABCC4O15439 1325 aa15.91■□□□□ 0.14
EDC3-217ENST00000569606 PI4KAP2A4QPH2 592 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 F6X3S4 739 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 DDX58O95786 925 aaKnown RBP15.9■□□□□ 0.14
EDC3-217ENST00000569606 MS4A1P11836 297 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 KSR2Q6VAB6 950 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 DEFB132Q7Z7B7 95 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 DZIP1LQ8IYY4 767 aaKnown RBP15.9■□□□□ 0.14
EDC3-217ENST00000569606 PI4KAP1Q8N8J0 262 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 PANK1Q8TE04 598 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 ZNF330Q9Y3S2 320 aaPredicted RBP15.9■□□□□ 0.14
EDC3-217ENST00000569606 C4AP0C0L4 1744 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 PXDNLA1KZ92 1463 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 BCORQ6W2J9 1755 aa15.9■□□□□ 0.14
EDC3-217ENST00000569606 TUBGCP6Q96RT7 1819 aa15.89■□□□□ 0.13
EDC3-217ENST00000569606 COL15A1P39059 1388 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms