RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 SYT17Q9BSW7 474 aa18.2■□□□□ 0.5
HERPUD1-218ENST00000569569 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
HERPUD1-218ENST00000569569 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
HERPUD1-218ENST00000569569 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-218ENST00000569569 NEUROD2Q15784 382 aa18.17■□□□□ 0.5
HERPUD1-218ENST00000569569 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
HERPUD1-218ENST00000569569 NLGN1Q8N2Q7 840 aa18.17■□□□□ 0.5
HERPUD1-218ENST00000569569 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
HERPUD1-218ENST00000569569 ZBTB1Q9Y2K1 713 aa18.17■□□□□ 0.5
HERPUD1-218ENST00000569569 RRP7AQ9Y3A4 280 aaKnown RBP18.17■□□□□ 0.5
HERPUD1-218ENST00000569569 SOS1Q07889 1333 aaPredicted RBP18.17■□□□□ 0.5
HERPUD1-218ENST00000569569 SNRPA1P09661 255 aaKnown RBP18.16■□□□□ 0.5
HERPUD1-218ENST00000569569 GYS1P13807 737 aa18.15■□□□□ 0.5
HERPUD1-218ENST00000569569 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-218ENST00000569569 KLHL34Q8N239 644 aa18.15■□□□□ 0.5
HERPUD1-218ENST00000569569 USP16Q9Y5T5 823 aa18.15■□□□□ 0.5
HERPUD1-218ENST00000569569 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
HERPUD1-218ENST00000569569 MRS2Q9HD23 443 aa18.14■□□□□ 0.49
HERPUD1-218ENST00000569569 USP42Q9H9J4 1324 aaKnown RBP18.14■□□□□ 0.49
HERPUD1-218ENST00000569569 ZPR1O75312 459 aa18.13■□□□□ 0.49
HERPUD1-218ENST00000569569 EIF5P55010 431 aaKnown RBP18.13■□□□□ 0.49
HERPUD1-218ENST00000569569 BABAM1Q9NWV8 329 aa18.13■□□□□ 0.49
HERPUD1-218ENST00000569569 SRP68Q9UHB9 627 aaKnown RBP18.13■□□□□ 0.49
HERPUD1-218ENST00000569569 TRIM35Q9UPQ4 493 aa18.13■□□□□ 0.49
HERPUD1-218ENST00000569569 COL15A1P39059 1388 aa18.13■□□□□ 0.49
HERPUD1-218ENST00000569569 A0A087WZG4 1122 aa18.12■□□□□ 0.49
HERPUD1-218ENST00000569569 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
HERPUD1-218ENST00000569569 A1BGP04217 495 aa18.12■□□□□ 0.49
HERPUD1-218ENST00000569569 MMP10P09238 476 aa18.12■□□□□ 0.49
HERPUD1-218ENST00000569569 IL6STP40189 918 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-218ENST00000569569 NARFQ9UHQ1 456 aa18.12■□□□□ 0.49
HERPUD1-218ENST00000569569 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
HERPUD1-218ENST00000569569 APAF1O14727 1248 aa18.11■□□□□ 0.49
HERPUD1-218ENST00000569569 EIF4A1P60842 406 aaKnown RBP18.11■□□□□ 0.49
HERPUD1-218ENST00000569569 USPL1Q5W0Q7 1092 aa18.11■□□□□ 0.49
HERPUD1-218ENST00000569569 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
HERPUD1-218ENST00000569569 TSPYL4Q9UJ04 414 aa18.11■□□□□ 0.49
HERPUD1-218ENST00000569569 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
HERPUD1-218ENST00000569569 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
HERPUD1-218ENST00000569569 FKBP8Q14318 412 aa18.09■□□□□ 0.49
HERPUD1-218ENST00000569569 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
HERPUD1-218ENST00000569569 ZNF330Q9Y3S2 320 aaPredicted RBP18.08■□□□□ 0.48
HERPUD1-218ENST00000569569 PARP3Q9Y6F1 533 aa18.08■□□□□ 0.48
HERPUD1-218ENST00000569569 NLGN2Q8NFZ4 835 aa18.07■□□□□ 0.48
HERPUD1-218ENST00000569569 CHL1O00533 1208 aa18.06■□□□□ 0.48
HERPUD1-218ENST00000569569 TM4SF1P30408 202 aa18.06■□□□□ 0.48
HERPUD1-218ENST00000569569 TBC1D2BQ9UPU7 963 aa18.06■□□□□ 0.48
HERPUD1-218ENST00000569569 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
HERPUD1-218ENST00000569569 AFDNP55196 1824 aaKnown RBP18.06■□□□□ 0.48
HERPUD1-218ENST00000569569 PIP4K2AP48426 406 aaPredicted RBP18.05■□□□□ 0.48
HERPUD1-218ENST00000569569 BCL2L12Q9HB09 334 aa18.05■□□□□ 0.48
HERPUD1-218ENST00000569569 CHD4Q14839 1912 aa18.04■□□□□ 0.48
HERPUD1-218ENST00000569569 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
HERPUD1-218ENST00000569569 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-218ENST00000569569 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
HERPUD1-218ENST00000569569 CFAP44Q96MT7 982 aa18.04■□□□□ 0.48
HERPUD1-218ENST00000569569 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
HERPUD1-218ENST00000569569 SCN7AQ01118 1682 aa18.03■□□□□ 0.48
HERPUD1-218ENST00000569569 CALD1Q05682 793 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-218ENST00000569569 DDR1Q08345 913 aa18.03■□□□□ 0.48
HERPUD1-218ENST00000569569 NFIXQ14938 502 aa18.03■□□□□ 0.48
HERPUD1-218ENST00000569569 DZIP3Q86Y13 1208 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-218ENST00000569569 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.48
HERPUD1-218ENST00000569569 POLRMTO00411 1230 aaKnown RBP18.02■□□□□ 0.48
HERPUD1-218ENST00000569569 GPR162Q16538 588 aa18.02■□□□□ 0.48
HERPUD1-218ENST00000569569 CAMTA2O94983 1202 aa18.01■□□□□ 0.47
HERPUD1-218ENST00000569569 TGFB2P61812 414 aa18.01■□□□□ 0.47
HERPUD1-218ENST00000569569 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
HERPUD1-218ENST00000569569 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
HERPUD1-218ENST00000569569 ERBB4Q15303 1308 aa18■□□□□ 0.47
HERPUD1-218ENST00000569569 NUP98P52948 1817 aa18■□□□□ 0.47
HERPUD1-218ENST00000569569 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
HERPUD1-218ENST00000569569 ZNF853P0CG23 659 aa18■□□□□ 0.47
HERPUD1-218ENST00000569569 GNAI1P63096 354 aa18■□□□□ 0.47
HERPUD1-218ENST00000569569 CCDC27Q2M243 656 aa18■□□□□ 0.47
HERPUD1-218ENST00000569569 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
HERPUD1-218ENST00000569569 IFT57Q9NWB7 429 aa18■□□□□ 0.47
HERPUD1-218ENST00000569569 KIAA1551Q9HCM1 1747 aa17.99■□□□□ 0.47
HERPUD1-218ENST00000569569 EIF2S2P20042 333 aaKnown RBP17.99■□□□□ 0.47
HERPUD1-218ENST00000569569 TBC1D9BQ66K14 1250 aa17.99■□□□□ 0.47
HERPUD1-218ENST00000569569 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
HERPUD1-218ENST00000569569 BICDL1Q6ZP65 573 aa17.99■□□□□ 0.47
HERPUD1-218ENST00000569569 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
HERPUD1-218ENST00000569569 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
HERPUD1-218ENST00000569569 UTRNP46939 3433 aa17.98■□□□□ 0.47
HERPUD1-218ENST00000569569 RGL2O15211 777 aa17.98■□□□□ 0.47
HERPUD1-218ENST00000569569 SERPINB2P05120 415 aa17.98■□□□□ 0.47
HERPUD1-218ENST00000569569 MYL6BP14649 208 aa17.98■□□□□ 0.47
HERPUD1-218ENST00000569569 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
HERPUD1-218ENST00000569569 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-218ENST00000569569 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-218ENST00000569569 KRT24Q2M2I5 525 aa17.97■□□□□ 0.47
HERPUD1-218ENST00000569569 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
HERPUD1-218ENST00000569569 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
HERPUD1-218ENST00000569569 SETDB2Q96T68 719 aa17.97■□□□□ 0.47
HERPUD1-218ENST00000569569 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
HERPUD1-218ENST00000569569 HOXB7P09629 217 aa17.96■□□□□ 0.47
HERPUD1-218ENST00000569569 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
HERPUD1-218ENST00000569569 CARMIL3Q8ND23 1372 aa17.95■□□□□ 0.46
HERPUD1-218ENST00000569569 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms