RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-210ENST00000569394 MRC1P22897 1456 aa11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 RFC4P35249 363 aa11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 TMPOP42166 694 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 PELP1Q8IZL8 1130 aaKnown RBP11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 SIPA1L3O60292 1781 aaPredicted RBP11.89□□□□□ -0.51
GTF3C1-210ENST00000569394 RPS6KA4O75676 772 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 A1BGP04217 495 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 SSFA2P28290 1259 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 TAF7Q15545 349 aaPredicted RBP11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 INTS5Q6P9B9 1019 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 FLAD1Q8NFF5 587 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 SLC16A10Q8TF71 515 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 RUNDC1Q96C34 613 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 FMNL2Q96PY5 1086 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 CCDC87Q9NVE4 849 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 ZBTB1Q9Y2K1 713 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
GTF3C1-210ENST00000569394 APAF1O14727 1248 aa11.87□□□□□ -0.51
GTF3C1-210ENST00000569394 CYP19A1P11511 503 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-210ENST00000569394 FAM9BQ8IZU0 186 aa11.87□□□□□ -0.51
GTF3C1-210ENST00000569394 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
GTF3C1-210ENST00000569394 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
GTF3C1-210ENST00000569394 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
GTF3C1-210ENST00000569394 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-210ENST00000569394 HMGB2P26583 209 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-210ENST00000569394 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-210ENST00000569394 NGEFQ8N5V2 710 aa11.86□□□□□ -0.51
GTF3C1-210ENST00000569394 SYT17Q9BSW7 474 aa11.86□□□□□ -0.51
GTF3C1-210ENST00000569394 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
GTF3C1-210ENST00000569394 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
GTF3C1-210ENST00000569394 UBR2Q8IWV8 1755 aa11.85□□□□□ -0.51
GTF3C1-210ENST00000569394 STARD3NLO95772 234 aa11.85□□□□□ -0.51
GTF3C1-210ENST00000569394 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
GTF3C1-210ENST00000569394 NLGN2Q8NFZ4 835 aa11.85□□□□□ -0.51
GTF3C1-210ENST00000569394 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
GTF3C1-210ENST00000569394 MMP10P09238 476 aa11.84□□□□□ -0.51
GTF3C1-210ENST00000569394 USPL1Q5W0Q7 1092 aa11.84□□□□□ -0.51
GTF3C1-210ENST00000569394 TBC1D2BQ9UPU7 963 aa11.84□□□□□ -0.51
GTF3C1-210ENST00000569394 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 ZPR1O75312 459 aa11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 SNRPA1P09661 255 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 GYS1P13807 737 aa11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 NPM2Q86SE8 214 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 VSIG10Q8N0Z9 540 aa11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 ZNF831Q5JPB2 1677 aa11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-210ENST00000569394 COL15A1P39059 1388 aa11.82□□□□□ -0.52
GTF3C1-210ENST00000569394 LMOD3Q0VAK6 560 aa11.82□□□□□ -0.52
GTF3C1-210ENST00000569394 KRT24Q2M2I5 525 aa11.82□□□□□ -0.52
GTF3C1-210ENST00000569394 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-210ENST00000569394 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
GTF3C1-210ENST00000569394 MYL6BP14649 208 aa11.81□□□□□ -0.52
GTF3C1-210ENST00000569394 EIF4A1P60842 406 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-210ENST00000569394 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-210ENST00000569394 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-210ENST00000569394 PARP3Q9Y6F1 533 aa11.81□□□□□ -0.52
GTF3C1-210ENST00000569394 KDM3BQ7LBC6 1761 aa11.8□□□□□ -0.52
GTF3C1-210ENST00000569394 ANXA1P04083 346 aa11.8□□□□□ -0.52
GTF3C1-210ENST00000569394 GPR162Q16538 588 aa11.8□□□□□ -0.52
GTF3C1-210ENST00000569394 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
GTF3C1-210ENST00000569394 CCDC24Q8N4L8 307 aa11.8□□□□□ -0.52
GTF3C1-210ENST00000569394 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
GTF3C1-210ENST00000569394 CICQ96RK0 1608 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-210ENST00000569394 FAM177BA6PVY3 158 aa11.79□□□□□ -0.52
GTF3C1-210ENST00000569394 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-210ENST00000569394 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-210ENST00000569394 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
GTF3C1-210ENST00000569394 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
GTF3C1-210ENST00000569394 EIF5P55010 431 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-210ENST00000569394 DDR1Q08345 913 aa11.78□□□□□ -0.52
GTF3C1-210ENST00000569394 NBPF10Q6P3W6 841 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-210ENST00000569394 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-210ENST00000569394 NBPF15Q8N660 670 aa11.78□□□□□ -0.52
GTF3C1-210ENST00000569394 ZNF428Q96B54 188 aa11.78□□□□□ -0.52
GTF3C1-210ENST00000569394 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
GTF3C1-210ENST00000569394 COL24A1Q17RW2 1714 aa11.77□□□□□ -0.52
GTF3C1-210ENST00000569394 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-210ENST00000569394 NFIXQ14938 502 aa11.77□□□□□ -0.53
GTF3C1-210ENST00000569394 TBC1D9BQ66K14 1250 aa11.77□□□□□ -0.53
GTF3C1-210ENST00000569394 A0A087WZG4 1122 aa11.76□□□□□ -0.53
GTF3C1-210ENST00000569394 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
GTF3C1-210ENST00000569394 NPHP1O15259 732 aa11.76□□□□□ -0.53
GTF3C1-210ENST00000569394 TSR2Q969E8 191 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-210ENST00000569394 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
GTF3C1-210ENST00000569394 N4BP2Q86UW6 1770 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-210ENST00000569394 CHL1O00533 1208 aa11.75□□□□□ -0.53
GTF3C1-210ENST00000569394 AIMP1Q12904 312 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-210ENST00000569394 PROSER3Q2NL68 480 aa11.75□□□□□ -0.53
GTF3C1-210ENST00000569394 TTLL7Q6ZT98 887 aa11.75□□□□□ -0.53
GTF3C1-210ENST00000569394 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
GTF3C1-210ENST00000569394 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
GTF3C1-210ENST00000569394 POLRMTO00411 1230 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms