RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-215	ENST00000569189	USP42	Q9H9J4	1324 aa	Known RBP	32.17	■■■□□ 2.74
GGA2-215	ENST00000569189	KDM3B	Q7LBC6	1761 aa		32.17	■■■□□ 2.74
GGA2-215	ENST00000569189	WDR43	Q15061	677 aa	Known RBP eCLIP	32.16	■■■□□ 2.74
GGA2-215	ENST00000569189	COL15A1	P39059	1388 aa		32.16	■■■□□ 2.74
GGA2-215	ENST00000569189	SRP68	Q9UHB9	627 aa	Known RBP	32.15	■■■□□ 2.74
GGA2-215	ENST00000569189	GOLGB1	Q14789	3259 aa	Known RBP	32.15	■■■□□ 2.74
GGA2-215	ENST00000569189	TAF7	Q15545	349 aa	Predicted RBP	32.14	■■■□□ 2.74
GGA2-215	ENST00000569189	KIF13B	Q9NQT8	1826 aa		32.14	■■■□□ 2.74
GGA2-215	ENST00000569189	CANX	P27824	592 aa	Known RBP	32.12	■■■□□ 2.73
GGA2-215	ENST00000569189	ZPR1	O75312	459 aa		32.1	■■■□□ 2.73
GGA2-215	ENST00000569189	CHD4	Q14839	1912 aa		32.1	■■■□□ 2.73
GGA2-215	ENST00000569189	FKBP8	Q14318	412 aa		32.09	■■■□□ 2.73
GGA2-215	ENST00000569189	GPR162	Q16538	588 aa		32.09	■■■□□ 2.73
GGA2-215	ENST00000569189	CCDC146	Q8IYE0	955 aa		32.09	■■■□□ 2.73
GGA2-215	ENST00000569189	THUMPD2	Q9BTF0	503 aa	Known RBP	32.09	■■■□□ 2.73
GGA2-215	ENST00000569189	RIPK4	P57078	832 aa		32.08	■■■□□ 2.73
GGA2-215	ENST00000569189	USPL1	Q5W0Q7	1092 aa		32.08	■■■□□ 2.73
GGA2-215	ENST00000569189	PNISR	Q8TF01	805 aa	Known RBP	32.08	■■■□□ 2.73
GGA2-215	ENST00000569189	LAMB4	A4D0S4	1761 aa		32.08	■■■□□ 2.73
GGA2-215	ENST00000569189	SNRPA1	P09661	255 aa	Known RBP	32.07	■■■□□ 2.72
GGA2-215	ENST00000569189	TMPO	P42166	694 aa	Known RBP	32.07	■■■□□ 2.72
GGA2-215	ENST00000569189	EIF5	P55010	431 aa	Known RBP	32.07	■■■□□ 2.72
GGA2-215	ENST00000569189	PELP1	Q8IZL8	1130 aa	Known RBP	32.07	■■■□□ 2.72
GGA2-215	ENST00000569189	MIS18A	Q9NYP9	233 aa		32.07	■■■□□ 2.72
GGA2-215	ENST00000569189	NARF	Q9UHQ1	456 aa		32.07	■■■□□ 2.72
GGA2-215	ENST00000569189	ADAMTS8	Q9UP79	889 aa		32.07	■■■□□ 2.72
GGA2-215	ENST00000569189	PARP3	Q9Y6F1	533 aa		32.07	■■■□□ 2.72
GGA2-215	ENST00000569189	SCN7A	Q01118	1682 aa		32.05	■■■□□ 2.72
GGA2-215	ENST00000569189	RUNDC1	Q96C34	613 aa		32.05	■■■□□ 2.72
GGA2-215	ENST00000569189	C10orf71	Q711Q0	1435 aa		32.05	■■■□□ 2.72
GGA2-215	ENST00000569189		A0A087WZG4	1122 aa		32.04	■■■□□ 2.72
GGA2-215	ENST00000569189	PRAMEF22	A3QJZ6	481 aa		32.04	■■■□□ 2.72
GGA2-215	ENST00000569189	A1BG	P04217	495 aa		32.04	■■■□□ 2.72
GGA2-215	ENST00000569189	LMOD3	Q0VAK6	560 aa		32.04	■■■□□ 2.72
GGA2-215	ENST00000569189	USP16	Q9Y5T5	823 aa		32.04	■■■□□ 2.72
GGA2-215	ENST00000569189	KIAA1551	Q9HCM1	1747 aa		32.03	■■■□□ 2.72
GGA2-215	ENST00000569189	IL6ST	P40189	918 aa	Predicted RBP	32.03	■■■□□ 2.72
GGA2-215	ENST00000569189	RRP7A	Q9Y3A4	280 aa	Known RBP	32.02	■■■□□ 2.72
GGA2-215	ENST00000569189	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.02	■■■□□ 2.72
GGA2-215	ENST00000569189	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.02	■■■□□ 2.72
GGA2-215	ENST00000569189	YY1	P25490	414 aa		32.01	■■■□□ 2.71
GGA2-215	ENST00000569189	DDR1	Q08345	913 aa		32.01	■■■□□ 2.71
GGA2-215	ENST00000569189	AFDN	P55196	1824 aa	Known RBP	32	■■■□□ 2.71
GGA2-215	ENST00000569189	BCOR	Q6W2J9	1755 aa		31.99	■■■□□ 2.71
GGA2-215	ENST00000569189	TM4SF1	P30408	202 aa		31.99	■■■□□ 2.71
GGA2-215	ENST00000569189	NEUROD2	Q15784	382 aa		31.99	■■■□□ 2.71
GGA2-215	ENST00000569189	BCL2L12	Q9HB09	334 aa		31.99	■■■□□ 2.71
GGA2-215	ENST00000569189	PXDNL	A1KZ92	1463 aa		31.98	■■■□□ 2.71
GGA2-215	ENST00000569189	YBX3	P16989	372 aa	Known RBP eCLIP	31.98	■■■□□ 2.71	8e-9	■□□□□ 9.2
GGA2-215	ENST00000569189	NPM2	Q86SE8	214 aa	Known RBP	31.98	■■■□□ 2.71
GGA2-215	ENST00000569189	POLRMT	O00411	1230 aa	Known RBP	31.97	■■■□□ 2.71
GGA2-215	ENST00000569189	EIF4A1	P60842	406 aa	Known RBP	31.96	■■■□□ 2.71
GGA2-215	ENST00000569189	NRXN2	Q9P2S2	1712 aa		31.96	■■■□□ 2.71
GGA2-215	ENST00000569189	PIP4K2A	P48426	406 aa	Predicted RBP	31.95	■■■□□ 2.71
GGA2-215	ENST00000569189	NFIX	Q14938	502 aa		31.95	■■■□□ 2.71
GGA2-215	ENST00000569189	TSPYL4	Q9UJ04	414 aa		31.95	■■■□□ 2.71
GGA2-215	ENST00000569189	TBC1D2B	Q9UPU7	963 aa		31.95	■■■□□ 2.71
GGA2-215	ENST00000569189	TGFB2	P61812	414 aa		31.94	■■■□□ 2.7
GGA2-215	ENST00000569189	BRCA1	P38398	1863 aa	Known RBP	31.93	■■■□□ 2.7
GGA2-215	ENST00000569189	ANP32C	O43423	234 aa		31.93	■■■□□ 2.7
GGA2-215	ENST00000569189	GRIN3B	O60391	1043 aa		31.93	■■■□□ 2.7
GGA2-215	ENST00000569189	GIGYF1	O75420	1035 aa	Predicted RBP	31.93	■■■□□ 2.7
GGA2-215	ENST00000569189	BABAM1	Q9NWV8	329 aa		31.92	■■■□□ 2.7
GGA2-215	ENST00000569189	TRIM35	Q9UPQ4	493 aa		31.92	■■■□□ 2.7
GGA2-215	ENST00000569189	CCDC184	Q52MB2	194 aa		31.91	■■■□□ 2.7
GGA2-215	ENST00000569189	WWC3	Q9ULE0	1092 aa		31.91	■■■□□ 2.7
GGA2-215	ENST00000569189	NBPF26	B4DH59	902 aa		31.9	■■■□□ 2.7
GGA2-215	ENST00000569189	NBPF10	Q6P3W6	841 aa	Known RBP	31.9	■■■□□ 2.7
GGA2-215	ENST00000569189	DZIP3	Q86Y13	1208 aa	Known RBP	31.9	■■■□□ 2.7
GGA2-215	ENST00000569189	NBPF15	Q8N660	670 aa		31.9	■■■□□ 2.7
GGA2-215	ENST00000569189	CAMTA2	O94983	1202 aa		31.89	■■■□□ 2.7
GGA2-215	ENST00000569189		A0A0G2JLW4	131 aa		31.88	■■■□□ 2.69
GGA2-215	ENST00000569189	BICDL1	Q6ZP65	573 aa		31.87	■■■□□ 2.69
GGA2-215	ENST00000569189	SERPINB2	P05120	415 aa		31.86	■■■□□ 2.69
GGA2-215	ENST00000569189	DPEP1	P16444	411 aa		31.86	■■■□□ 2.69
GGA2-215	ENST00000569189	TBC1D9B	Q66K14	1250 aa		31.86	■■■□□ 2.69
GGA2-215	ENST00000569189	APAF1	O14727	1248 aa		31.85	■■■□□ 2.69
GGA2-215	ENST00000569189	CARMIL3	Q8ND23	1372 aa		31.82	■■■□□ 2.69
GGA2-215	ENST00000569189	CHL1	O00533	1208 aa		31.82	■■■□□ 2.68
GGA2-215	ENST00000569189	MRS2	Q9HD23	443 aa		31.82	■■■□□ 2.68
GGA2-215	ENST00000569189	ARFGEF1	Q9Y6D6	1849 aa		31.82	■■■□□ 2.68
GGA2-215	ENST00000569189	DLEC1	Q9Y238	1755 aa		31.81	■■■□□ 2.68
GGA2-215	ENST00000569189	LAS1L	Q9Y4W2	734 aa	Known RBP	31.81	■■■□□ 2.68
GGA2-215	ENST00000569189	CLEC4G	Q6UXB4	293 aa		31.8	■■■□□ 2.68
GGA2-215	ENST00000569189	ZNF652	Q9Y2D9	606 aa		31.8	■■■□□ 2.68
GGA2-215	ENST00000569189	ANKRD31	Q8N7Z5	1873 aa		31.8	■■■□□ 2.68
GGA2-215	ENST00000569189	KCNA3	P22001	575 aa		31.79	■■■□□ 2.68
GGA2-215	ENST00000569189	SETDB2	Q96T68	719 aa		31.79	■■■□□ 2.68
GGA2-215	ENST00000569189	BCS1L	Q9Y276	419 aa		31.79	■■■□□ 2.68
GGA2-215	ENST00000569189	ERBB4	Q15303	1308 aa		31.78	■■■□□ 2.68
GGA2-215	ENST00000569189	NUP98	P52948	1817 aa		31.78	■■■□□ 2.68
GGA2-215	ENST00000569189	RGL2	O15211	777 aa		31.77	■■■□□ 2.68
GGA2-215	ENST00000569189	CHRNA5	P30532	468 aa		31.77	■■■□□ 2.68
GGA2-215	ENST00000569189	PIM2	Q9P1W9	311 aa		31.76	■■■□□ 2.67
GGA2-215	ENST00000569189	MYL6B	P14649	208 aa		31.75	■■■□□ 2.67
GGA2-215	ENST00000569189	NGEF	Q8N5V2	710 aa		31.75	■■■□□ 2.67
GGA2-215	ENST00000569189	CFAP44	Q96MT7	982 aa		31.75	■■■□□ 2.67
GGA2-215	ENST00000569189	EIF2S2	P20042	333 aa	Known RBP	31.74	■■■□□ 2.67
GGA2-215	ENST00000569189	PRR5L	Q6MZQ0	368 aa		31.73	■■■□□ 2.67
GGA2-215	ENST00000569189	CALD1	Q05682	793 aa	Known RBP	31.72	■■■□□ 2.67

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