RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-219ENST00000569136 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-219ENST00000569136 BAG6P46379 1132 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 HSP90AB2PQ58FF8 381 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 POLKQ9UBT6 870 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 NFAT5O94916 1531 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 PIK3C2AO00443 1686 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 AKAP12Q02952 1782 aa12.5□□□□□ -0.41
CAPN3-219ENST00000569136 ABCC6O95255 1503 aa12.49□□□□□ -0.41
CAPN3-219ENST00000569136 INSRP06213 1382 aa12.49□□□□□ -0.41
CAPN3-219ENST00000569136 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
CAPN3-219ENST00000569136 FLT4P35916 1363 aa12.48□□□□□ -0.41
CAPN3-219ENST00000569136 PRSS12P56730 875 aa12.48□□□□□ -0.41
CAPN3-219ENST00000569136 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
CAPN3-219ENST00000569136 PADI6Q6TGC4 694 aa12.48□□□□□ -0.41
CAPN3-219ENST00000569136 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
CAPN3-219ENST00000569136 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
CAPN3-219ENST00000569136 CRYBG1Q9Y4K1 1723 aa12.48□□□□□ -0.41
CAPN3-219ENST00000569136 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
CAPN3-219ENST00000569136 ZMYND10O75800 440 aa12.47□□□□□ -0.41
CAPN3-219ENST00000569136 TRIM37O94972 964 aa12.47□□□□□ -0.41
CAPN3-219ENST00000569136 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-219ENST00000569136 PROX2Q3B8N5 592 aa12.47□□□□□ -0.41
CAPN3-219ENST00000569136 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
CAPN3-219ENST00000569136 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
CAPN3-219ENST00000569136 MARCH10Q8NA82 808 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-219ENST00000569136 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
CAPN3-219ENST00000569136 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
CAPN3-219ENST00000569136 PLCH1Q4KWH8 1693 aa12.46□□□□□ -0.41
CAPN3-219ENST00000569136 LMO7Q8WWI1 1683 aa12.46□□□□□ -0.41
CAPN3-219ENST00000569136 APBA3O96018 575 aa12.46□□□□□ -0.41
CAPN3-219ENST00000569136 FECHP22830 423 aa12.46□□□□□ -0.41
CAPN3-219ENST00000569136 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.41
CAPN3-219ENST00000569136 ZCRB1Q8TBF4 217 aaKnown RBP12.46□□□□□ -0.41
CAPN3-219ENST00000569136 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.41
CAPN3-219ENST00000569136 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
CAPN3-219ENST00000569136 LSM11P83369 360 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPN3-219ENST00000569136 DEFB132Q7Z7B7 95 aa12.45□□□□□ -0.42
CAPN3-219ENST00000569136 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
CAPN3-219ENST00000569136 TATP17735 454 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-219ENST00000569136 BCL9O00512 1426 aa12.44□□□□□ -0.42
CAPN3-219ENST00000569136 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
CAPN3-219ENST00000569136 NRAPQ86VF7 1730 aa12.43□□□□□ -0.42
CAPN3-219ENST00000569136 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
CAPN3-219ENST00000569136 DDX54Q8TDD1 881 aaKnown RBP12.43□□□□□ -0.42
CAPN3-219ENST00000569136 DISP2A7MBM2 1401 aa12.43□□□□□ -0.42
CAPN3-219ENST00000569136 COL18A1P39060 1754 aa12.43□□□□□ -0.42
CAPN3-219ENST00000569136 PLSCR1O15162 318 aa12.42□□□□□ -0.42
CAPN3-219ENST00000569136 CC2D1BQ5T0F9 858 aaKnown RBP12.42□□□□□ -0.42
CAPN3-219ENST00000569136 PACS2Q86VP3 889 aa12.42□□□□□ -0.42
CAPN3-219ENST00000569136 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
CAPN3-219ENST00000569136 EYA1Q99502 592 aa12.42□□□□□ -0.42
CAPN3-219ENST00000569136 SLC24A3Q9HC58 644 aa12.42□□□□□ -0.42
CAPN3-219ENST00000569136 TSKSQ9UJT2 592 aa12.42□□□□□ -0.42
CAPN3-219ENST00000569136 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
CAPN3-219ENST00000569136 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
CAPN3-219ENST00000569136 EP400Q96L91 3159 aa12.41□□□□□ -0.42
CAPN3-219ENST00000569136 USP54Q70EL1 1684 aa12.41□□□□□ -0.42
CAPN3-219ENST00000569136 MTHFSP49914 203 aa12.4□□□□□ -0.42
CAPN3-219ENST00000569136 MAP2K5Q13163 448 aa12.4□□□□□ -0.42
CAPN3-219ENST00000569136 EIF4A2Q14240 407 aaKnown RBP12.4□□□□□ -0.42
CAPN3-219ENST00000569136 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
CAPN3-219ENST00000569136 KIAA1468Q9P260 1216 aa12.4□□□□□ -0.42
CAPN3-219ENST00000569136 SPG7Q9UQ90 795 aa12.4□□□□□ -0.42
CAPN3-219ENST00000569136 PARD3Q8TEW0 1356 aa12.4□□□□□ -0.42
CAPN3-219ENST00000569136 THSD7AQ9UPZ6 1657 aa12.39□□□□□ -0.43
CAPN3-219ENST00000569136 HMGB2P26583 209 aaKnown RBP12.39□□□□□ -0.43
CAPN3-219ENST00000569136 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
CAPN3-219ENST00000569136 USHBP1Q8N6Y0 703 aa12.39□□□□□ -0.43
CAPN3-219ENST00000569136 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
CAPN3-219ENST00000569136 EZH2Q15910 746 aaKnown RBP12.38□□□□□ -0.43
CAPN3-219ENST00000569136 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
CAPN3-219ENST00000569136 FAM198AQ9UFP1 575 aa12.38□□□□□ -0.43
CAPN3-219ENST00000569136 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
CAPN3-219ENST00000569136 NBPF26B4DH59 902 aa12.37□□□□□ -0.43
CAPN3-219ENST00000569136 IL13P35225 146 aa12.37□□□□□ -0.43
CAPN3-219ENST00000569136 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
CAPN3-219ENST00000569136 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-219ENST00000569136 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
CAPN3-219ENST00000569136 SLC4A5Q9BY07 1137 aa12.37□□□□□ -0.43
CAPN3-219ENST00000569136 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
CAPN3-219ENST00000569136 KRTAP3-2Q9BYR7 98 aa12.37□□□□□ -0.43
CAPN3-219ENST00000569136 SMAPO00193 183 aa12.36□□□□□ -0.43
CAPN3-219ENST00000569136 IRF6O14896 467 aa12.36□□□□□ -0.43
CAPN3-219ENST00000569136 KCNQ2O43526 872 aa12.36□□□□□ -0.43
CAPN3-219ENST00000569136 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
CAPN3-219ENST00000569136 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
CAPN3-219ENST00000569136 PCDH11XQ9BZA7 1347 aa12.36□□□□□ -0.43
CAPN3-219ENST00000569136 PCDH11YQ9BZA8 1340 aa12.36□□□□□ -0.43
CAPN3-219ENST00000569136 PLEKHG2Q9H7P9 1386 aa12.35□□□□□ -0.43
CAPN3-219ENST00000569136 TK2O00142 265 aa12.35□□□□□ -0.43
CAPN3-219ENST00000569136 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
CAPN3-219ENST00000569136 IFNL2Q8IZJ0 200 aa12.35□□□□□ -0.43
CAPN3-219ENST00000569136 TTC13Q8NBP0 860 aa12.35□□□□□ -0.43
CAPN3-219ENST00000569136 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
CAPN3-219ENST00000569136 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
CAPN3-219ENST00000569136 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms