RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 MVPQ14764 893 aaKnown RBP11.96□□□□□ -0.49
CNOT1-214ENST00000568917 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-214ENST00000568917 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.49
CNOT1-214ENST00000568917 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
CNOT1-214ENST00000568917 TSPYL6Q8N831 410 aa11.96□□□□□ -0.49
CNOT1-214ENST00000568917 C8orf58Q8NAV2 365 aa11.96□□□□□ -0.49
CNOT1-214ENST00000568917 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
CNOT1-214ENST00000568917 NLRP2Q9NX02 1062 aa11.96□□□□□ -0.49
CNOT1-214ENST00000568917 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
CNOT1-214ENST00000568917 SCN11AQ9UI33 1791 aa11.96□□□□□ -0.5
CNOT1-214ENST00000568917 PHLPP1O60346 1717 aa11.96□□□□□ -0.5
CNOT1-214ENST00000568917 COL16A1Q07092 1604 aaPredicted RBP11.95□□□□□ -0.5
CNOT1-214ENST00000568917 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
CNOT1-214ENST00000568917 TRIM27P14373 513 aa11.95□□□□□ -0.5
CNOT1-214ENST00000568917 C3orf67Q6ZVT6 689 aa11.95□□□□□ -0.5
CNOT1-214ENST00000568917 BCL2L13Q9BXK5 485 aa11.95□□□□□ -0.5
CNOT1-214ENST00000568917 NOB1Q9ULX3 412 aaKnown RBP11.95□□□□□ -0.5
CNOT1-214ENST00000568917 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
CNOT1-214ENST00000568917 HSP90AB1P08238 724 aaKnown RBP11.94□□□□□ -0.5
CNOT1-214ENST00000568917 CENPQQ7L2Z9 268 aaPredicted RBP11.94□□□□□ -0.5
CNOT1-214ENST00000568917 CLUAP1Q96AJ1 413 aa11.94□□□□□ -0.5
CNOT1-214ENST00000568917 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
CNOT1-214ENST00000568917 DDX19BQ9UMR2 479 aa11.94□□□□□ -0.5
CNOT1-214ENST00000568917 PTPRCP08575 1304 aa11.94□□□□□ -0.5
CNOT1-214ENST00000568917 CHRNA2Q15822 529 aa11.93□□□□□ -0.5
CNOT1-214ENST00000568917 CARD10Q9BWT7 1032 aa11.93□□□□□ -0.5
CNOT1-214ENST00000568917 MEGF6O75095 1541 aa11.93□□□□□ -0.5
CNOT1-214ENST00000568917 MRC1P22897 1456 aa11.93□□□□□ -0.5
CNOT1-214ENST00000568917 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
CNOT1-214ENST00000568917 G3V3G9 751 aa11.92□□□□□ -0.5
CNOT1-214ENST00000568917 RNMTO43148 476 aaKnown RBP11.92□□□□□ -0.5
CNOT1-214ENST00000568917 RLBP1P12271 317 aa11.92□□□□□ -0.5
CNOT1-214ENST00000568917 TEFQ10587 303 aa11.92□□□□□ -0.5
CNOT1-214ENST00000568917 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
CNOT1-214ENST00000568917 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
CNOT1-214ENST00000568917 PANK1Q8TE04 598 aa11.92□□□□□ -0.5
CNOT1-214ENST00000568917 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
CNOT1-214ENST00000568917 ABCC4O15439 1325 aa11.92□□□□□ -0.5
CNOT1-214ENST00000568917 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
CNOT1-214ENST00000568917 PHKG2P15735 406 aa11.9□□□□□ -0.5
CNOT1-214ENST00000568917 CCDC30Q5VVM6 783 aa11.9□□□□□ -0.5
CNOT1-214ENST00000568917 DCAF5Q96JK2 942 aa11.9□□□□□ -0.5
CNOT1-214ENST00000568917 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-214ENST00000568917 TOM1L2Q6ZVM7 507 aa11.89□□□□□ -0.51
CNOT1-214ENST00000568917 BBXQ8WY36 941 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-214ENST00000568917 STK31Q9BXU1 1019 aa11.89□□□□□ -0.51
CNOT1-214ENST00000568917 LGR6Q9HBX8 967 aa11.89□□□□□ -0.51
CNOT1-214ENST00000568917 PCDH11XQ9BZA7 1347 aa11.89□□□□□ -0.51
CNOT1-214ENST00000568917 PCDH11YQ9BZA8 1340 aa11.89□□□□□ -0.51
CNOT1-214ENST00000568917 N4BP2Q86UW6 1770 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-214ENST00000568917 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
CNOT1-214ENST00000568917 NWD2Q9ULI1 1742 aa11.88□□□□□ -0.51
CNOT1-214ENST00000568917 BTBD11A6QL63 1104 aa11.88□□□□□ -0.51
CNOT1-214ENST00000568917 IL2RBP14784 551 aa11.88□□□□□ -0.51
CNOT1-214ENST00000568917 EVA1CP58658 441 aa11.88□□□□□ -0.51
CNOT1-214ENST00000568917 EIF4A1P60842 406 aaKnown RBP11.88□□□□□ -0.51
CNOT1-214ENST00000568917 ITPRIPQ8IWB1 547 aa11.88□□□□□ -0.51
CNOT1-214ENST00000568917 KDM6AO15550 1401 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-214ENST00000568917 INTS3Q68E01 1043 aaKnown RBP11.87□□□□□ -0.51
CNOT1-214ENST00000568917 MPRIPQ6WCQ1 1025 aa11.87□□□□□ -0.51
CNOT1-214ENST00000568917 TMEM57Q8N5G2 664 aa11.87□□□□□ -0.51
CNOT1-214ENST00000568917 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
CNOT1-214ENST00000568917 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
CNOT1-214ENST00000568917 SHANK3Q9BYB0 1731 aa11.87□□□□□ -0.51
CNOT1-214ENST00000568917 PXDNLA1KZ92 1463 aa11.87□□□□□ -0.51
CNOT1-214ENST00000568917 WNK3Q9BYP7 1800 aa11.87□□□□□ -0.51
CNOT1-214ENST00000568917 TCERG1O14776 1098 aaKnown RBP11.86□□□□□ -0.51
CNOT1-214ENST00000568917 KRT24Q2M2I5 525 aa11.86□□□□□ -0.51
CNOT1-214ENST00000568917 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
CNOT1-214ENST00000568917 RWDD1Q9H446 243 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-214ENST00000568917 ZBTB40Q9NUA8 1239 aa11.86□□□□□ -0.51
CNOT1-214ENST00000568917 NRAPQ86VF7 1730 aa11.86□□□□□ -0.51
CNOT1-214ENST00000568917 RGS12O14924 1447 aa11.86□□□□□ -0.51
CNOT1-214ENST00000568917 CYP27B1O15528 508 aa11.86□□□□□ -0.51
CNOT1-214ENST00000568917 HDAC1Q13547 482 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-214ENST00000568917 CDCA7Q9BWT1 371 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-214ENST00000568917 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
CNOT1-214ENST00000568917 ERVV-2B6SEH9 535 aa11.85□□□□□ -0.51
CNOT1-214ENST00000568917 LARP1Q6PKG0 1096 aaKnown RBP11.85□□□□□ -0.51
CNOT1-214ENST00000568917 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
CNOT1-214ENST00000568917 BTG4Q9NY30 223 aa11.85□□□□□ -0.51
CNOT1-214ENST00000568917 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
CNOT1-214ENST00000568917 LRP6O75581 1613 aa11.84□□□□□ -0.51
CNOT1-214ENST00000568917 DISP2A7MBM2 1401 aa11.84□□□□□ -0.51
CNOT1-214ENST00000568917 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
CNOT1-214ENST00000568917 CCT4P50991 539 aaKnown RBP11.84□□□□□ -0.51
CNOT1-214ENST00000568917 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
CNOT1-214ENST00000568917 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
CNOT1-214ENST00000568917 ZNF790Q6PG37 636 aa11.83□□□□□ -0.52
CNOT1-214ENST00000568917 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
CNOT1-214ENST00000568917 STRN4Q9NRL3 753 aa11.83□□□□□ -0.52
CNOT1-214ENST00000568917 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
CNOT1-214ENST00000568917 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
CNOT1-214ENST00000568917 JCADQ9P266 1359 aa11.82□□□□□ -0.52
CNOT1-214ENST00000568917 UBR2Q8IWV8 1755 aa11.82□□□□□ -0.52
CNOT1-214ENST00000568917 SLIT2O94813 1529 aa11.82□□□□□ -0.52
CNOT1-214ENST00000568917 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
CNOT1-214ENST00000568917 FLIIQ13045 1269 aa11.82□□□□□ -0.52
CNOT1-214ENST00000568917 LCE2DQ5TA82 110 aaPredicted RBP11.82□□□□□ -0.52
CNOT1-214ENST00000568917 DBF4Q9UBU7 674 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms