RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 CD2APQ9Y5K6 639 aa18.09■□□□□ 0.49
NEIL1-220ENST00000568881 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
NEIL1-220ENST00000568881 UBR2Q8IWV8 1755 aa18.09■□□□□ 0.49
NEIL1-220ENST00000568881 TAF7Q15545 349 aaPredicted RBP18.08■□□□□ 0.48
NEIL1-220ENST00000568881 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.48
NEIL1-220ENST00000568881 GOLGB1Q14789 3259 aaKnown RBP18.08■□□□□ 0.48
NEIL1-220ENST00000568881 INTS5Q6P9B9 1019 aaKnown RBP18.07■□□□□ 0.48
NEIL1-220ENST00000568881 A0A087WZG4 1122 aa18.06■□□□□ 0.48
NEIL1-220ENST00000568881 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
NEIL1-220ENST00000568881 PARP3Q9Y6F1 533 aa18.06■□□□□ 0.48
NEIL1-220ENST00000568881 SOS1Q07889 1333 aaPredicted RBP18.05■□□□□ 0.48
NEIL1-220ENST00000568881 USP42Q9H9J4 1324 aaKnown RBP18.05■□□□□ 0.48
NEIL1-220ENST00000568881 KCNQ3O43525 872 aa18.05■□□□□ 0.48
NEIL1-220ENST00000568881 MMP10P09238 476 aa18.05■□□□□ 0.48
NEIL1-220ENST00000568881 GYS1P13807 737 aa18.05■□□□□ 0.48
NEIL1-220ENST00000568881 DCTN1Q14203 1278 aa18.05■□□□□ 0.48
NEIL1-220ENST00000568881 GPR162Q16538 588 aa18.05■□□□□ 0.48
NEIL1-220ENST00000568881 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
NEIL1-220ENST00000568881 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
NEIL1-220ENST00000568881 C4AP0C0L4 1744 aa18.04■□□□□ 0.48
NEIL1-220ENST00000568881 SNRPA1P09661 255 aaKnown RBP18.04■□□□□ 0.48
NEIL1-220ENST00000568881 SRP68Q9UHB9 627 aaKnown RBP18.04■□□□□ 0.48
NEIL1-220ENST00000568881 ZBTB1Q9Y2K1 713 aa18.04■□□□□ 0.48
NEIL1-220ENST00000568881 COL15A1P39059 1388 aa18.04■□□□□ 0.48
NEIL1-220ENST00000568881 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
NEIL1-220ENST00000568881 CANXP27824 592 aaKnown RBP18.03■□□□□ 0.48
NEIL1-220ENST00000568881 RIPK4P57078 832 aa18.03■□□□□ 0.48
NEIL1-220ENST00000568881 PELP1Q8IZL8 1130 aaKnown RBP18.03■□□□□ 0.48
NEIL1-220ENST00000568881 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
NEIL1-220ENST00000568881 DLG5Q8TDM6 1919 aa18.02■□□□□ 0.47
NEIL1-220ENST00000568881 IL6STP40189 918 aaPredicted RBP18.01■□□□□ 0.47
NEIL1-220ENST00000568881 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
NEIL1-220ENST00000568881 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
NEIL1-220ENST00000568881 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
NEIL1-220ENST00000568881 GRIN3BO60391 1043 aa18■□□□□ 0.47
NEIL1-220ENST00000568881 YBX3P16989 372 aaKnown RBP eCLIP18■□□□□ 0.47
NEIL1-220ENST00000568881 USPL1Q5W0Q7 1092 aa18■□□□□ 0.47
NEIL1-220ENST00000568881 ZNF330Q9Y3S2 320 aaPredicted RBP18■□□□□ 0.47
NEIL1-220ENST00000568881 EIF5P55010 431 aaKnown RBP17.99■□□□□ 0.47
NEIL1-220ENST00000568881 BABAM1Q9NWV8 329 aa17.99■□□□□ 0.47
NEIL1-220ENST00000568881 PRAMEF22A3QJZ6 481 aa17.98■□□□□ 0.47
NEIL1-220ENST00000568881 APAF1O14727 1248 aa17.98■□□□□ 0.47
NEIL1-220ENST00000568881 TGFB2P61812 414 aa17.98■□□□□ 0.47
NEIL1-220ENST00000568881 FKBP8Q14318 412 aa17.97■□□□□ 0.47
NEIL1-220ENST00000568881 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
NEIL1-220ENST00000568881 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
NEIL1-220ENST00000568881 THUMPD2Q9BTF0 503 aaKnown RBP17.96■□□□□ 0.47
NEIL1-220ENST00000568881 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.47
NEIL1-220ENST00000568881 USP16Q9Y5T5 823 aa17.96■□□□□ 0.47
NEIL1-220ENST00000568881 A1BGP04217 495 aa17.95■□□□□ 0.46
NEIL1-220ENST00000568881 DDR1Q08345 913 aa17.95■□□□□ 0.46
NEIL1-220ENST00000568881 MIS18AQ9NYP9 233 aa17.95■□□□□ 0.46
NEIL1-220ENST00000568881 PIP4K2AP48426 406 aaPredicted RBP17.94■□□□□ 0.46
NEIL1-220ENST00000568881 CALD1Q05682 793 aaKnown RBP17.94■□□□□ 0.46
NEIL1-220ENST00000568881 ZNF652Q9Y2D9 606 aa17.94■□□□□ 0.46
NEIL1-220ENST00000568881 C10orf71Q711Q0 1435 aa17.94■□□□□ 0.46
NEIL1-220ENST00000568881 KIAA1551Q9HCM1 1747 aa17.94■□□□□ 0.46
NEIL1-220ENST00000568881 KDM3BQ7LBC6 1761 aa17.94■□□□□ 0.46
NEIL1-220ENST00000568881 TM4SF1P30408 202 aa17.93■□□□□ 0.46
NEIL1-220ENST00000568881 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
NEIL1-220ENST00000568881 DZIP3Q86Y13 1208 aaKnown RBP17.93■□□□□ 0.46
NEIL1-220ENST00000568881 BCL2L12Q9HB09 334 aa17.93■□□□□ 0.46
NEIL1-220ENST00000568881 POLRMTO00411 1230 aaKnown RBP17.92■□□□□ 0.46
NEIL1-220ENST00000568881 GIGYF1O75420 1035 aaPredicted RBP17.92■□□□□ 0.46
NEIL1-220ENST00000568881 TBC1D2BQ9UPU7 963 aa17.92■□□□□ 0.46
NEIL1-220ENST00000568881 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
NEIL1-220ENST00000568881 RGL2O15211 777 aa17.91■□□□□ 0.46
NEIL1-220ENST00000568881 NPHP1O15259 732 aa17.91■□□□□ 0.46
NEIL1-220ENST00000568881 NFIXQ14938 502 aa17.91■□□□□ 0.46
NEIL1-220ENST00000568881 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
NEIL1-220ENST00000568881 ZNF784Q8NCA9 323 aaPredicted RBP17.91■□□□□ 0.46
NEIL1-220ENST00000568881 LAMB4A4D0S4 1761 aa17.91■□□□□ 0.46
NEIL1-220ENST00000568881 KIF13BQ9NQT8 1826 aa17.91■□□□□ 0.46
NEIL1-220ENST00000568881 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
NEIL1-220ENST00000568881 CLEC4GQ6UXB4 293 aa17.9■□□□□ 0.46
NEIL1-220ENST00000568881 SETDB2Q96T68 719 aa17.9■□□□□ 0.46
NEIL1-220ENST00000568881 TRIM35Q9UPQ4 493 aa17.9■□□□□ 0.46
NEIL1-220ENST00000568881 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
NEIL1-220ENST00000568881 CARMIL3Q8ND23 1372 aa17.9■□□□□ 0.46
NEIL1-220ENST00000568881 SERPINB2P05120 415 aa17.89■□□□□ 0.45
NEIL1-220ENST00000568881 BICDL1Q6ZP65 573 aa17.89■□□□□ 0.45
NEIL1-220ENST00000568881 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
NEIL1-220ENST00000568881 CHD4Q14839 1912 aa17.89■□□□□ 0.45
NEIL1-220ENST00000568881 SCN7AQ01118 1682 aa17.89■□□□□ 0.45
NEIL1-220ENST00000568881 N4BP2Q86UW6 1770 aaPredicted RBP17.88■□□□□ 0.45
NEIL1-220ENST00000568881 A0A0G2JLW4 131 aa17.87■□□□□ 0.45
NEIL1-220ENST00000568881 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
NEIL1-220ENST00000568881 CCDC27Q2M243 656 aa17.87■□□□□ 0.45
NEIL1-220ENST00000568881 KIF6Q6ZMV9 814 aa17.87■□□□□ 0.45
NEIL1-220ENST00000568881 PIM2Q9P1W9 311 aa17.87■□□□□ 0.45
NEIL1-220ENST00000568881 PDZRN3Q9UPQ7 1066 aa17.87■□□□□ 0.45
NEIL1-220ENST00000568881 CHL1O00533 1208 aa17.86■□□□□ 0.45
NEIL1-220ENST00000568881 DPEP1P16444 411 aa17.86■□□□□ 0.45
NEIL1-220ENST00000568881 TBC1D9BQ66K14 1250 aa17.86■□□□□ 0.45
NEIL1-220ENST00000568881 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
NEIL1-220ENST00000568881 BCS1LQ9Y276 419 aa17.86■□□□□ 0.45
NEIL1-220ENST00000568881 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
NEIL1-220ENST00000568881 NBPF26B4DH59 902 aa17.85■□□□□ 0.45
NEIL1-220ENST00000568881 C1QTNF8P60827 252 aa17.85■□□□□ 0.45
NEIL1-220ENST00000568881 ST5P78524 1137 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms