RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 B4GALNT3Q6L9W6 998 aa15.06■□□□□ 0
SNAPC5-208ENST00000568875 TTC5Q8N0Z6 440 aa15.06■□□□□ 0
SNAPC5-208ENST00000568875 ZNF496Q96IT1 587 aaPredicted RBP15.06■□□□□ 0
SNAPC5-208ENST00000568875 SIPA1L3O60292 1781 aaPredicted RBP15.06■□□□□ 0
SNAPC5-208ENST00000568875 TJP1Q07157 1748 aa15.06■□□□□ 0
SNAPC5-208ENST00000568875 BTBD11A6QL63 1104 aa15.06■□□□□ 0
SNAPC5-208ENST00000568875 KCNQ3O43525 872 aa15.05■□□□□ -0
SNAPC5-208ENST00000568875 NFE2L2Q16236 605 aa15.05■□□□□ -0
SNAPC5-208ENST00000568875 CCDC87Q9NVE4 849 aa15.05■□□□□ -0
SNAPC5-208ENST00000568875 RFC4P35249 363 aa15.04■□□□□ -0
SNAPC5-208ENST00000568875 UBR2Q8IWV8 1755 aa15.04■□□□□ -0
SNAPC5-208ENST00000568875 GYS1P13807 737 aa15.03■□□□□ -0
SNAPC5-208ENST00000568875 NLGN1Q8N2Q7 840 aa15.03■□□□□ -0
SNAPC5-208ENST00000568875 HEG1Q9ULI3 1381 aa15.03■□□□□ -0
SNAPC5-208ENST00000568875 STARD3NLO95772 234 aa15.03■□□□□ -0
SNAPC5-208ENST00000568875 TAF7Q15545 349 aaPredicted RBP15.03■□□□□ -0
SNAPC5-208ENST00000568875 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
SNAPC5-208ENST00000568875 TEX13AQ9BXU3 409 aaPredicted RBP15.03■□□□□ -0
SNAPC5-208ENST00000568875 DCAF8L1A6NGE4 600 aa15.02□□□□□ -0.01
SNAPC5-208ENST00000568875 KLHL34Q8N239 644 aa15.02□□□□□ -0.01
SNAPC5-208ENST00000568875 CCDC136Q96JN2 1154 aa15.02□□□□□ -0.01
SNAPC5-208ENST00000568875 DLG5Q8TDM6 1919 aa15.01□□□□□ -0.01
SNAPC5-208ENST00000568875 SOS1Q07889 1333 aaPredicted RBP15.01□□□□□ -0.01
SNAPC5-208ENST00000568875 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
SNAPC5-208ENST00000568875 NLGN2Q8NFZ4 835 aa15.01□□□□□ -0.01
SNAPC5-208ENST00000568875 ADAMTS8Q9UP79 889 aa15.01□□□□□ -0.01
SNAPC5-208ENST00000568875 ZBTB1Q9Y2K1 713 aa15.01□□□□□ -0.01
SNAPC5-208ENST00000568875 CD2APQ9Y5K6 639 aa15.01□□□□□ -0.01
SNAPC5-208ENST00000568875 MMP10P09238 476 aa15□□□□□ -0.01
SNAPC5-208ENST00000568875 RRP1P56182 461 aaKnown RBP15□□□□□ -0.01
SNAPC5-208ENST00000568875 SRP68Q9UHB9 627 aaKnown RBP15□□□□□ -0.01
SNAPC5-208ENST00000568875 RCAN3Q9UKA8 241 aa15□□□□□ -0.01
SNAPC5-208ENST00000568875 USP42Q9H9J4 1324 aaKnown RBP15□□□□□ -0.01
SNAPC5-208ENST00000568875 MIS18AQ9NYP9 233 aa15□□□□□ -0.01
SNAPC5-208ENST00000568875 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
SNAPC5-208ENST00000568875 EIF5P55010 431 aaKnown RBP14.99□□□□□ -0.01
SNAPC5-208ENST00000568875 RIPK4P57078 832 aa14.99□□□□□ -0.01
SNAPC5-208ENST00000568875 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNAPC5-208ENST00000568875 THUMPD2Q9BTF0 503 aaKnown RBP14.99□□□□□ -0.01
SNAPC5-208ENST00000568875 CANXP27824 592 aaKnown RBP14.98□□□□□ -0.01
SNAPC5-208ENST00000568875 USP16Q9Y5T5 823 aa14.98□□□□□ -0.01
SNAPC5-208ENST00000568875 A1BGP04217 495 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 SNRPA1P09661 255 aaKnown RBP14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 CCDC146Q8IYE0 955 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 RUNDC1Q96C34 613 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 C4AP0C0L4 1744 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 ZPR1O75312 459 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 TM4SF1P30408 202 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 USPL1Q5W0Q7 1092 aa14.97□□□□□ -0.01
SNAPC5-208ENST00000568875 COL15A1P39059 1388 aa14.96□□□□□ -0.01
SNAPC5-208ENST00000568875 IL6STP40189 918 aaPredicted RBP14.95□□□□□ -0.02
SNAPC5-208ENST00000568875 BCL2L12Q9HB09 334 aa14.95□□□□□ -0.02
SNAPC5-208ENST00000568875 GPR162Q16538 588 aa14.95□□□□□ -0.02
SNAPC5-208ENST00000568875 RRP7AQ9Y3A4 280 aaKnown RBP14.95□□□□□ -0.02
SNAPC5-208ENST00000568875 PARP3Q9Y6F1 533 aa14.95□□□□□ -0.02
SNAPC5-208ENST00000568875 A0A087WZG4 1122 aa14.94□□□□□ -0.02
SNAPC5-208ENST00000568875 EIF4A1P60842 406 aaKnown RBP14.94□□□□□ -0.02
SNAPC5-208ENST00000568875 DDR1Q08345 913 aa14.94□□□□□ -0.02
SNAPC5-208ENST00000568875 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
SNAPC5-208ENST00000568875 LMOD3Q0VAK6 560 aa14.93□□□□□ -0.02
SNAPC5-208ENST00000568875 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
SNAPC5-208ENST00000568875 POLRMTO00411 1230 aaKnown RBP14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 GIGYF1O75420 1035 aaPredicted RBP14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 YBX3P16989 372 aaKnown RBP eCLIP14.92□□□□□ -0.021e-6■■□□□ 12
SNAPC5-208ENST00000568875 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 NBPF26B4DH59 902 aa14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 TGFB2P61812 414 aa14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 NFIXQ14938 502 aa14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 NBPF10Q6P3W6 841 aaKnown RBP14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 NGEFQ8N5V2 710 aa14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 NBPF15Q8N660 670 aa14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 TBC1D2BQ9UPU7 963 aa14.92□□□□□ -0.02
SNAPC5-208ENST00000568875 KDM3BQ7LBC6 1761 aa14.91□□□□□ -0.02
SNAPC5-208ENST00000568875 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
SNAPC5-208ENST00000568875 YY1P25490 414 aa14.9□□□□□ -0.02
SNAPC5-208ENST00000568875 TSPYL4Q9UJ04 414 aa14.9□□□□□ -0.02
SNAPC5-208ENST00000568875 ZNF330Q9Y3S2 320 aaPredicted RBP14.9□□□□□ -0.02
SNAPC5-208ENST00000568875 C10orf71Q711Q0 1435 aa14.9□□□□□ -0.02
SNAPC5-208ENST00000568875 KIF13BQ9NQT8 1826 aa14.9□□□□□ -0.02
SNAPC5-208ENST00000568875 GRIN3BO60391 1043 aa14.89□□□□□ -0.03
SNAPC5-208ENST00000568875 CAMTA2O94983 1202 aa14.89□□□□□ -0.03
SNAPC5-208ENST00000568875 NPM2Q86SE8 214 aaKnown RBP14.89□□□□□ -0.03
SNAPC5-208ENST00000568875 A0A0G2JLW4 131 aa14.89□□□□□ -0.03
SNAPC5-208ENST00000568875 CHL1O00533 1208 aa14.89□□□□□ -0.03
SNAPC5-208ENST00000568875 APAF1O14727 1248 aa14.89□□□□□ -0.03
SNAPC5-208ENST00000568875 TCERG1O14776 1098 aaKnown RBP14.88□□□□□ -0.03
SNAPC5-208ENST00000568875 KCNA3P22001 575 aa14.88□□□□□ -0.03
SNAPC5-208ENST00000568875 TBC1D9BQ66K14 1250 aa14.88□□□□□ -0.03
SNAPC5-208ENST00000568875 DZIP3Q86Y13 1208 aaKnown RBP14.88□□□□□ -0.03
SNAPC5-208ENST00000568875 PXDNLA1KZ92 1463 aa14.87□□□□□ -0.03
SNAPC5-208ENST00000568875 ZNF521Q96K83 1311 aa14.87□□□□□ -0.03
SNAPC5-208ENST00000568875 SERPINB2P05120 415 aa14.87□□□□□ -0.03
SNAPC5-208ENST00000568875 CDCA7LQ96GN5 454 aa14.87□□□□□ -0.03
SNAPC5-208ENST00000568875 MS4A1P11836 297 aa14.86□□□□□ -0.03
SNAPC5-208ENST00000568875 DPEP1P16444 411 aa14.86□□□□□ -0.03
SNAPC5-208ENST00000568875 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
SNAPC5-208ENST00000568875 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
SNAPC5-208ENST00000568875 CHD4Q14839 1912 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms