RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 C4AP0C0L4 1744 aa27.96■■■□□ 2.07
GGA2-212ENST00000568799 CANXP27824 592 aaKnown RBP27.96■■■□□ 2.07
GGA2-212ENST00000568799 COL15A1P39059 1388 aa27.95■■■□□ 2.07
GGA2-212ENST00000568799 SIPA1L3O60292 1781 aaPredicted RBP27.94■■■□□ 2.06
GGA2-212ENST00000568799 DCTN1Q14203 1278 aa27.94■■■□□ 2.06
GGA2-212ENST00000568799 NPM2Q86SE8 214 aaKnown RBP27.94■■■□□ 2.06
GGA2-212ENST00000568799 YBX3P16989 372 aaKnown RBP eCLIP27.93■■■□□ 2.068e-9■□□□□ 9.2
GGA2-212ENST00000568799 FKBP8Q14318 412 aa27.93■■■□□ 2.06
GGA2-212ENST00000568799 USPL1Q5W0Q7 1092 aa27.93■■■□□ 2.06
GGA2-212ENST00000568799 PLEKHF1Q96S99 279 aa27.92■■■□□ 2.06
GGA2-212ENST00000568799 NARFQ9UHQ1 456 aa27.92■■■□□ 2.06
GGA2-212ENST00000568799 A0A087WZG4 1122 aa27.92■■■□□ 2.06
GGA2-212ENST00000568799 TGFB2P61812 414 aa27.91■■■□□ 2.06
GGA2-212ENST00000568799 NFE2L2Q16236 605 aa27.91■■■□□ 2.06
GGA2-212ENST00000568799 ZNF330Q9Y3S2 320 aaPredicted RBP27.91■■■□□ 2.06
GGA2-212ENST00000568799 CHD4Q14839 1912 aa27.9■■■□□ 2.06
GGA2-212ENST00000568799 KCNQ3O43525 872 aa27.9■■■□□ 2.06
GGA2-212ENST00000568799 TAF7Q15545 349 aaPredicted RBP27.9■■■□□ 2.06
GGA2-212ENST00000568799 WWC3Q9ULE0 1092 aa27.89■■■□□ 2.06
GGA2-212ENST00000568799 C10orf71Q711Q0 1435 aa27.88■■■□□ 2.05
GGA2-212ENST00000568799 SNRPA1P09661 255 aaKnown RBP27.87■■■□□ 2.05
GGA2-212ENST00000568799 EIF5P55010 431 aaKnown RBP27.87■■■□□ 2.05
GGA2-212ENST00000568799 PNISRQ8TF01 805 aaKnown RBP27.87■■■□□ 2.05
GGA2-212ENST00000568799 IL6STP40189 918 aaPredicted RBP27.86■■■□□ 2.05
GGA2-212ENST00000568799 DDR1Q08345 913 aa27.85■■■□□ 2.05
GGA2-212ENST00000568799 WDR43Q15061 677 aaKnown RBP eCLIP27.85■■■□□ 2.05
GGA2-212ENST00000568799 PXDNLA1KZ92 1463 aa27.84■■■□□ 2.05
GGA2-212ENST00000568799 TM4SF1P30408 202 aa27.84■■■□□ 2.05
GGA2-212ENST00000568799 ZNF784Q8NCA9 323 aaPredicted RBP27.84■■■□□ 2.05
GGA2-212ENST00000568799 A0A0G2JLW4 131 aa27.83■■■□□ 2.05
GGA2-212ENST00000568799 POLRMTO00411 1230 aaKnown RBP27.83■■■□□ 2.05
GGA2-212ENST00000568799 A1BGP04217 495 aa27.83■■■□□ 2.05
GGA2-212ENST00000568799 PRKRIP1Q9H875 184 aaPredicted RBP27.83■■■□□ 2.05
GGA2-212ENST00000568799 ZNF316A6NFI3 1004 aaPredicted RBP27.82■■■□□ 2.04
GGA2-212ENST00000568799 MIS18AQ9NYP9 233 aa27.82■■■□□ 2.04
GGA2-212ENST00000568799 USP16Q9Y5T5 823 aa27.82■■■□□ 2.04
GGA2-212ENST00000568799 KIF13BQ9NQT8 1826 aa27.81■■■□□ 2.04
GGA2-212ENST00000568799 NFIXQ14938 502 aa27.81■■■□□ 2.04
GGA2-212ENST00000568799 DPEP1P16444 411 aa27.8■■■□□ 2.04
GGA2-212ENST00000568799 RIPK4P57078 832 aa27.8■■■□□ 2.04
GGA2-212ENST00000568799 LMOD3Q0VAK6 560 aa27.8■■■□□ 2.04
GGA2-212ENST00000568799 TBC1D2BQ9UPU7 963 aa27.8■■■□□ 2.04
GGA2-212ENST00000568799 BCL2L12Q9HB09 334 aa27.79■■■□□ 2.04
GGA2-212ENST00000568799 BCS1LQ9Y276 419 aa27.79■■■□□ 2.04
GGA2-212ENST00000568799 THUMPD2Q9BTF0 503 aaKnown RBP27.78■■■□□ 2.04
GGA2-212ENST00000568799 DLG5Q8TDM6 1919 aa27.78■■■□□ 2.04
GGA2-212ENST00000568799 PRAMEF22A3QJZ6 481 aa27.77■■■□□ 2.04
GGA2-212ENST00000568799 BICDL1Q6ZP65 573 aa27.77■■■□□ 2.04
GGA2-212ENST00000568799 SERPINB2P05120 415 aa27.76■■■□□ 2.04
GGA2-212ENST00000568799 DZIP3Q86Y13 1208 aaKnown RBP27.75■■■□□ 2.03
GGA2-212ENST00000568799 PIM2Q9P1W9 311 aa27.75■■■□□ 2.03
GGA2-212ENST00000568799 TMPOP42166 694 aaKnown RBP27.75■■■□□ 2.03
GGA2-212ENST00000568799 CCDC146Q8IYE0 955 aa27.75■■■□□ 2.03
GGA2-212ENST00000568799 N4BP2Q86UW6 1770 aaPredicted RBP27.74■■■□□ 2.03
GGA2-212ENST00000568799 PIP4K2AP48426 406 aaPredicted RBP27.74■■■□□ 2.03
GGA2-212ENST00000568799 RUNDC1Q96C34 613 aa27.73■■■□□ 2.03
GGA2-212ENST00000568799 TSPYL4Q9UJ04 414 aa27.73■■■□□ 2.03
GGA2-212ENST00000568799 NEUROD2Q15784 382 aa27.72■■■□□ 2.03
GGA2-212ENST00000568799 TBC1D9BQ66K14 1250 aa27.72■■■□□ 2.03
GGA2-212ENST00000568799 NPHP1O15259 732 aa27.71■■■□□ 2.03
GGA2-212ENST00000568799 EIF4A1P60842 406 aaKnown RBP27.71■■■□□ 2.03
GGA2-212ENST00000568799 DALRD3Q5D0E6 543 aaKnown RBP27.71■■■□□ 2.03
GGA2-212ENST00000568799 SETDB2Q96T68 719 aa27.71■■■□□ 2.03
GGA2-212ENST00000568799 ZNF652Q9Y2D9 606 aa27.71■■■□□ 2.03
GGA2-212ENST00000568799 RRP7AQ9Y3A4 280 aaKnown RBP27.71■■■□□ 2.03
GGA2-212ENST00000568799 KIAA1551Q9HCM1 1747 aa27.71■■■□□ 2.03
GGA2-212ENST00000568799 CARMIL3Q8ND23 1372 aa27.7■■■□□ 2.03
GGA2-212ENST00000568799 CAMTA2O94983 1202 aa27.7■■■□□ 2.03
GGA2-212ENST00000568799 ADAMTS8Q9UP79 889 aa27.7■■■□□ 2.03
GGA2-212ENST00000568799 SCN7AQ01118 1682 aa27.7■■■□□ 2.02
GGA2-212ENST00000568799 GIGYF1O75420 1035 aaPredicted RBP27.69■■■□□ 2.02
GGA2-212ENST00000568799 KCNA3P22001 575 aa27.69■■■□□ 2.02
GGA2-212ENST00000568799 CHRNA5P30532 468 aa27.69■■■□□ 2.02
GGA2-212ENST00000568799 KDM3BQ7LBC6 1761 aa27.68■■■□□ 2.02
GGA2-212ENST00000568799 CLEC4GQ6UXB4 293 aa27.67■■■□□ 2.02
GGA2-212ENST00000568799 ARHGAP27Q6ZUM4 889 aa27.67■■■□□ 2.02
GGA2-212ENST00000568799 BABAM1Q9NWV8 329 aa27.67■■■□□ 2.02
GGA2-212ENST00000568799 NBPF26B4DH59 902 aa27.67■■■□□ 2.02
GGA2-212ENST00000568799 NBPF10Q6P3W6 841 aaKnown RBP27.67■■■□□ 2.02
GGA2-212ENST00000568799 NBPF15Q8N660 670 aa27.67■■■□□ 2.02
GGA2-212ENST00000568799 AFDNP55196 1824 aaKnown RBP27.65■■■□□ 2.02
GGA2-212ENST00000568799 NRXN2Q9P2S2 1712 aa27.64■■■□□ 2.02
GGA2-212ENST00000568799 H0YIN7 160 aa27.64■■■□□ 2.02
GGA2-212ENST00000568799 CNBD1Q8NA66 436 aa27.64■■■□□ 2.02
GGA2-212ENST00000568799 LAMB4A4D0S4 1761 aa27.64■■■□□ 2.01
GGA2-212ENST00000568799 PDE6BP35913 854 aa27.63■■■□□ 2.01
GGA2-212ENST00000568799 ST5P78524 1137 aa27.63■■■□□ 2.01
GGA2-212ENST00000568799 C2CD5Q86YS7 1000 aa27.63■■■□□ 2.01
GGA2-212ENST00000568799 PDZRN3Q9UPQ7 1066 aa27.63■■■□□ 2.01
GGA2-212ENST00000568799 ATP10DQ9P241 1426 aa27.63■■■□□ 2.01
GGA2-212ENST00000568799 RGL2O15211 777 aa27.62■■■□□ 2.01
GGA2-212ENST00000568799 PRR5LQ6MZQ0 368 aa27.62■■■□□ 2.01
GGA2-212ENST00000568799 NGEFQ8N5V2 710 aa27.62■■■□□ 2.01
GGA2-212ENST00000568799 BRIP1Q9BX63 1249 aa27.61■■■□□ 2.01
GGA2-212ENST00000568799 BRCA1P38398 1863 aaKnown RBP27.6■■■□□ 2.01
GGA2-212ENST00000568799 KIF6Q6ZMV9 814 aa27.6■■■□□ 2.01
GGA2-212ENST00000568799 NBPF5PQ86XG9 351 aaPredicted RBP27.6■■■□□ 2.01
GGA2-212ENST00000568799 LAS1LQ9Y4W2 734 aaKnown RBP27.6■■■□□ 2.01
GGA2-212ENST00000568799 BCORQ6W2J9 1755 aa27.6■■■□□ 2.01
GGA2-212ENST00000568799 ERBB4Q15303 1308 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms