RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
PKM-221ENST00000568743 ZNF831Q5JPB2 1677 aa13.14□□□□□ -0.31
PKM-221ENST00000568743 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 TAF1LQ8IZX4 1826 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 STARD3NLO95772 234 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 CANXP27824 592 aaKnown RBP13.13□□□□□ -0.31
PKM-221ENST00000568743 DUSP27Q5VZP5 1158 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
PKM-221ENST00000568743 TSPYL6Q8N831 410 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
PKM-221ENST00000568743 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 ZBTB1Q9Y2K1 713 aa13.13□□□□□ -0.31
PKM-221ENST00000568743 EIF2S2P20042 333 aaKnown RBP13.12□□□□□ -0.31
PKM-221ENST00000568743 RC3H1Q5TC82 1133 aaKnown RBP13.12□□□□□ -0.31
PKM-221ENST00000568743 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
PKM-221ENST00000568743 PDGFDQ9GZP0 370 aaPredicted RBP13.12□□□□□ -0.31
PKM-221ENST00000568743 COL5A3P25940 1745 aaPredicted RBP13.12□□□□□ -0.31
PKM-221ENST00000568743 CICQ96RK0 1608 aaPredicted RBP13.12□□□□□ -0.31
PKM-221ENST00000568743 MSH5O43196 834 aa13.11□□□□□ -0.31
PKM-221ENST00000568743 EXOSC9Q06265 439 aaKnown RBP13.11□□□□□ -0.31
PKM-221ENST00000568743 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
PKM-221ENST00000568743 MYH16Q9H6N6 1097 aa13.11□□□□□ -0.31
PKM-221ENST00000568743 ZNF330Q9Y3S2 320 aaPredicted RBP13.11□□□□□ -0.31
PKM-221ENST00000568743 PNPLA7Q6ZV29 1317 aa13.11□□□□□ -0.31
PKM-221ENST00000568743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
PKM-221ENST00000568743 E9PSI1 815 aa13.1□□□□□ -0.31
PKM-221ENST00000568743 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
PKM-221ENST00000568743 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
PKM-221ENST00000568743 COL23A1Q86Y22 540 aaPredicted RBP13.1□□□□□ -0.31
PKM-221ENST00000568743 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
PKM-221ENST00000568743 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
PKM-221ENST00000568743 ANXA1P04083 346 aa13.09□□□□□ -0.31
PKM-221ENST00000568743 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
PKM-221ENST00000568743 NBPF10Q6P3W6 841 aaKnown RBP13.09□□□□□ -0.31
PKM-221ENST00000568743 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
PKM-221ENST00000568743 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
PKM-221ENST00000568743 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
PKM-221ENST00000568743 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
PKM-221ENST00000568743 TCERG1O14776 1098 aaKnown RBP13.08□□□□□ -0.32
PKM-221ENST00000568743 HOXB7P09629 217 aa13.08□□□□□ -0.32
PKM-221ENST00000568743 SSFA2P28290 1259 aa13.08□□□□□ -0.32
PKM-221ENST00000568743 PROSER3Q2NL68 480 aa13.08□□□□□ -0.32
PKM-221ENST00000568743 TWISTNBQ3B726 338 aaPredicted RBP13.08□□□□□ -0.32
PKM-221ENST00000568743 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
PKM-221ENST00000568743 TUBGCP6Q96RT7 1819 aa13.08□□□□□ -0.32
PKM-221ENST00000568743 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
PKM-221ENST00000568743 MYL6BP14649 208 aa13.07□□□□□ -0.32
PKM-221ENST00000568743 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
PKM-221ENST00000568743 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
PKM-221ENST00000568743 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
PKM-221ENST00000568743 ARXQ96QS3 562 aa13.07□□□□□ -0.32
PKM-221ENST00000568743 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
PKM-221ENST00000568743 UBR3Q6ZT12 1888 aa13.07□□□□□ -0.32
PKM-221ENST00000568743 COL15A1P39059 1388 aa13.07□□□□□ -0.32
PKM-221ENST00000568743 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
PKM-221ENST00000568743 IL6STP40189 918 aaPredicted RBP13.06□□□□□ -0.32
PKM-221ENST00000568743 PDIA6Q15084 440 aa13.06□□□□□ -0.32
PKM-221ENST00000568743 SRP68Q9UHB9 627 aaKnown RBP13.06□□□□□ -0.32
PKM-221ENST00000568743 VAMP4O75379 141 aa13.05□□□□□ -0.32
PKM-221ENST00000568743 ADRA2BP18089 450 aa13.05□□□□□ -0.32
PKM-221ENST00000568743 RFC4P35249 363 aa13.05□□□□□ -0.32
PKM-221ENST00000568743 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
PKM-221ENST00000568743 FLAD1Q8NFF5 587 aa13.05□□□□□ -0.32
PKM-221ENST00000568743 TBC1D2BQ9UPU7 963 aa13.05□□□□□ -0.32
PKM-221ENST00000568743 NPM2Q86SE8 214 aaKnown RBP13.04□□□□□ -0.32
PKM-221ENST00000568743 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
PKM-221ENST00000568743 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
PKM-221ENST00000568743 CASZ1Q86V15 1759 aa13.03□□□□□ -0.32
PKM-221ENST00000568743 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
PKM-221ENST00000568743 USPL1Q5W0Q7 1092 aa13.03□□□□□ -0.32
PKM-221ENST00000568743 TTLL7Q6ZT98 887 aa13.03□□□□□ -0.32
PKM-221ENST00000568743 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
PKM-221ENST00000568743 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
PKM-221ENST00000568743 DDX21Q9NR30 783 aaKnown RBP eCLIP13.03□□□□□ -0.32
PKM-221ENST00000568743 DBF4Q9UBU7 674 aaPredicted RBP13.03□□□□□ -0.32
PKM-221ENST00000568743 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
PKM-221ENST00000568743 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.32
PKM-221ENST00000568743 A0A087WZG4 1122 aa13.02□□□□□ -0.33
PKM-221ENST00000568743 ZPR1O75312 459 aa13.02□□□□□ -0.33
PKM-221ENST00000568743 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.33
PKM-221ENST00000568743 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.33
PKM-221ENST00000568743 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
PKM-221ENST00000568743 C4AP0C0L4 1744 aa13.02□□□□□ -0.33
PKM-221ENST00000568743 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
PKM-221ENST00000568743 GYS1P13807 737 aa13.01□□□□□ -0.33
PKM-221ENST00000568743 FKBP8Q14318 412 aa13.01□□□□□ -0.33
PKM-221ENST00000568743 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
PKM-221ENST00000568743 STK31Q9BXU1 1019 aa13.01□□□□□ -0.33
PKM-221ENST00000568743 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
PKM-221ENST00000568743 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
PKM-221ENST00000568743 SLC4A2P04920 1241 aa13□□□□□ -0.33
PKM-221ENST00000568743 SLC16A10Q8TF71 515 aa13□□□□□ -0.33
PKM-221ENST00000568743 MTFR1LQ9H019 292 aa13□□□□□ -0.33
PKM-221ENST00000568743 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
PKM-221ENST00000568743 HYPKQ9NX55 129 aa13□□□□□ -0.33
PKM-221ENST00000568743 HLFQ16534 295 aa12.99□□□□□ -0.33
PKM-221ENST00000568743 KIF6Q6ZMV9 814 aa12.99□□□□□ -0.33
PKM-221ENST00000568743 G2E3Q7L622 706 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms