RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 SLC27A3Q5K4L6 730 aa9.9□□□□□ -0.82
SCAPER-221ENST00000568549 DNAJC10Q8IXB1 793 aa9.9□□□□□ -0.82
SCAPER-221ENST00000568549 TEX13AQ9BXU3 409 aaPredicted RBP9.9□□□□□ -0.82
SCAPER-221ENST00000568549 TUBGCP6Q96RT7 1819 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 VAMP4O75379 141 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 STARD3NLO95772 234 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 EIF2S2P20042 333 aaKnown RBP9.89□□□□□ -0.83
SCAPER-221ENST00000568549 KCNQ4P56696 695 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 EN1Q05925 392 aaPredicted RBP9.89□□□□□ -0.83
SCAPER-221ENST00000568549 ITPK1Q13572 414 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 TXNRD1Q16881 649 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 HDGFL1Q5TGJ6 251 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
SCAPER-221ENST00000568549 CHMP4AQ9BY43 222 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 USP16Q9Y5T5 823 aa9.89□□□□□ -0.83
SCAPER-221ENST00000568549 UBR3Q6ZT12 1888 aa9.88□□□□□ -0.83
SCAPER-221ENST00000568549 CYP19A1P11511 503 aaPredicted RBP9.88□□□□□ -0.83
SCAPER-221ENST00000568549 EZH2Q15910 746 aaKnown RBP9.88□□□□□ -0.83
SCAPER-221ENST00000568549 CCDC30Q5VVM6 783 aa9.88□□□□□ -0.83
SCAPER-221ENST00000568549 DEFB132Q7Z7B7 95 aa9.88□□□□□ -0.83
SCAPER-221ENST00000568549 LINC00116Q8NCU8 138 aa9.88□□□□□ -0.83
SCAPER-221ENST00000568549 NECTIN2Q92692 538 aa9.88□□□□□ -0.83
SCAPER-221ENST00000568549 CAMKK2Q96RR4 588 aa9.88□□□□□ -0.83
SCAPER-221ENST00000568549 LRRC4BQ9NT99 713 aa9.88□□□□□ -0.83
SCAPER-221ENST00000568549 HMGB2P26583 209 aaKnown RBP9.87□□□□□ -0.83
SCAPER-221ENST00000568549 CRKLP46109 303 aaKnown RBP9.87□□□□□ -0.83
SCAPER-221ENST00000568549 PROM2Q8N271 834 aa9.87□□□□□ -0.83
SCAPER-221ENST00000568549 ZNF428Q96B54 188 aa9.87□□□□□ -0.83
SCAPER-221ENST00000568549 ERBB4Q15303 1308 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 CNTNAP4Q9C0A0 1308 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 TCERG1O14776 1098 aaKnown RBP9.86□□□□□ -0.83
SCAPER-221ENST00000568549 A1BGP04217 495 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 C4AP0C0L4 1744 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 QSER1Q2KHR3 1735 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 ALDH1L2Q3SY69 923 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 STK31Q9BXU1 1019 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 CCDC87Q9NVE4 849 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 CHPF2Q9P2E5 772 aa9.86□□□□□ -0.83
SCAPER-221ENST00000568549 DBF4Q9UBU7 674 aaPredicted RBP9.86□□□□□ -0.83
SCAPER-221ENST00000568549 CENPBP07199 599 aaPredicted RBP9.85□□□□□ -0.83
SCAPER-221ENST00000568549 MYL6BP14649 208 aa9.85□□□□□ -0.83
SCAPER-221ENST00000568549 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
SCAPER-221ENST00000568549 PIP4K2AP48426 406 aaPredicted RBP9.85□□□□□ -0.83
SCAPER-221ENST00000568549 RARSP54136 660 aaKnown RBP9.85□□□□□ -0.83
SCAPER-221ENST00000568549 RC3H1Q5TC82 1133 aaKnown RBP9.85□□□□□ -0.83
SCAPER-221ENST00000568549 INTS5Q6P9B9 1019 aaKnown RBP9.85□□□□□ -0.83
SCAPER-221ENST00000568549 AK7Q96M32 723 aa9.85□□□□□ -0.83
SCAPER-221ENST00000568549 DDX21Q9NR30 783 aaKnown RBP eCLIP9.85□□□□□ -0.83
SCAPER-221ENST00000568549 SMC4Q9NTJ3 1288 aa9.85□□□□□ -0.83
SCAPER-221ENST00000568549 RCAN3Q9UKA8 241 aa9.85□□□□□ -0.83
SCAPER-221ENST00000568549 ZBTB1Q9Y2K1 713 aa9.85□□□□□ -0.83
SCAPER-221ENST00000568549 BCORQ6W2J9 1755 aa9.84□□□□□ -0.83
SCAPER-221ENST00000568549 ARFGEF2Q9Y6D5 1785 aa9.84□□□□□ -0.83
SCAPER-221ENST00000568549 ANXA1P04083 346 aa9.84□□□□□ -0.83
SCAPER-221ENST00000568549 SLC4A2P04920 1241 aa9.84□□□□□ -0.83
SCAPER-221ENST00000568549 PDIA6Q15084 440 aa9.84□□□□□ -0.83
SCAPER-221ENST00000568549 SSH1Q8WYL5 1049 aa9.84□□□□□ -0.83
SCAPER-221ENST00000568549 BCL2L13Q9BXK5 485 aa9.84□□□□□ -0.83
SCAPER-221ENST00000568549 HYPKQ9NX55 129 aa9.84□□□□□ -0.83
SCAPER-221ENST00000568549 NBPF26B4DH59 902 aa9.83□□□□□ -0.84
SCAPER-221ENST00000568549 GNPATO15228 680 aa9.83□□□□□ -0.84
SCAPER-221ENST00000568549 IL6STP40189 918 aaPredicted RBP9.83□□□□□ -0.84
SCAPER-221ENST00000568549 PROSER3Q2NL68 480 aa9.83□□□□□ -0.84
SCAPER-221ENST00000568549 NBPF14Q5TI25 921 aa9.83□□□□□ -0.84
SCAPER-221ENST00000568549 NBPF10Q6P3W6 841 aaKnown RBP9.83□□□□□ -0.84
SCAPER-221ENST00000568549 MRPL50Q8N5N7 158 aaKnown RBP9.83□□□□□ -0.84
SCAPER-221ENST00000568549 NBPF15Q8N660 670 aa9.83□□□□□ -0.84
SCAPER-221ENST00000568549 ZNF330Q9Y3S2 320 aaPredicted RBP9.83□□□□□ -0.84
SCAPER-221ENST00000568549 NUP98P52948 1817 aa9.83□□□□□ -0.84
SCAPER-221ENST00000568549 SCN7AQ01118 1682 aa9.83□□□□□ -0.84
SCAPER-221ENST00000568549 ANKRD36CQ5JPF3 1778 aa9.83□□□□□ -0.84
SCAPER-221ENST00000568549 RPS6KA4O75676 772 aa9.82□□□□□ -0.84
SCAPER-221ENST00000568549 BCAR3O75815 825 aa9.82□□□□□ -0.84
SCAPER-221ENST00000568549 ZNF827Q17R98 1081 aa9.82□□□□□ -0.84
SCAPER-221ENST00000568549 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
SCAPER-221ENST00000568549 AKT1S1Q96B36 256 aa9.82□□□□□ -0.84
SCAPER-221ENST00000568549 PHAXQ9H814 394 aaKnown RBP9.82□□□□□ -0.84
SCAPER-221ENST00000568549 RTCBQ9Y3I0 505 aaKnown RBP9.82□□□□□ -0.84
SCAPER-221ENST00000568549 COL15A1P39059 1388 aa9.82□□□□□ -0.84
SCAPER-221ENST00000568549 AFDNP55196 1824 aaKnown RBP9.82□□□□□ -0.84
SCAPER-221ENST00000568549 KIF16BQ96L93 1317 aa9.82□□□□□ -0.84
SCAPER-221ENST00000568549 N4BP2Q86UW6 1770 aaPredicted RBP9.81□□□□□ -0.84
SCAPER-221ENST00000568549 PHF14O94880 888 aa9.81□□□□□ -0.84
SCAPER-221ENST00000568549 EIF5P55010 431 aaKnown RBP9.81□□□□□ -0.84
SCAPER-221ENST00000568549 BRPF1P55201 1214 aaPredicted RBP9.81□□□□□ -0.84
SCAPER-221ENST00000568549 AIMP1Q12904 312 aaKnown RBP9.81□□□□□ -0.84
SCAPER-221ENST00000568549 FLIIQ13045 1269 aa9.81□□□□□ -0.84
SCAPER-221ENST00000568549 G2E3Q7L622 706 aa9.81□□□□□ -0.84
SCAPER-221ENST00000568549 LRP10Q7Z4F1 713 aa9.81□□□□□ -0.84
SCAPER-221ENST00000568549 XAGE3Q8WTP9 111 aa9.81□□□□□ -0.84
SCAPER-221ENST00000568549 ANO8Q9HCE9 1232 aaPredicted RBP9.81□□□□□ -0.84
SCAPER-221ENST00000568549 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
SCAPER-221ENST00000568549 TFCP2L1Q9NZI6 479 aa9.81□□□□□ -0.84
SCAPER-221ENST00000568549 A0A087WZG4 1122 aa9.8□□□□□ -0.84
SCAPER-221ENST00000568549 SSFA2P28290 1259 aa9.8□□□□□ -0.84
SCAPER-221ENST00000568549 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
SCAPER-221ENST00000568549 SLC15A2Q16348 729 aa9.8□□□□□ -0.84
SCAPER-221ENST00000568549 KIF6Q6ZMV9 814 aa9.8□□□□□ -0.84
SCAPER-221ENST00000568549 SMIM5Q71RC9 77 aa9.8□□□□□ -0.84
SCAPER-221ENST00000568549 COPS6Q7L5N1 327 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms