RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-222	ENST00000568444	VAMP4	O75379	141 aa		18.37	■□□□□ 0.53
KLHDC4-222	ENST00000568444	LINC00116	Q8NCU8	138 aa		18.37	■□□□□ 0.53
KLHDC4-222	ENST00000568444	CAMKK2	Q96RR4	588 aa		18.37	■□□□□ 0.53
KLHDC4-222	ENST00000568444	LRRC4B	Q9NT99	713 aa		18.37	■□□□□ 0.53
KLHDC4-222	ENST00000568444	C4B	P0C0L5	1744 aa		18.36	■□□□□ 0.53
KLHDC4-222	ENST00000568444	CT47B1	P0C2W7	299 aa	Predicted RBP	18.36	■□□□□ 0.53
KLHDC4-222	ENST00000568444	PROM2	Q8N271	834 aa		18.36	■□□□□ 0.53
KLHDC4-222	ENST00000568444	TCERG1	O14776	1098 aa	Known RBP	18.35	■□□□□ 0.53
KLHDC4-222	ENST00000568444	CYP19A1	P11511	503 aa	Predicted RBP	18.35	■□□□□ 0.53
KLHDC4-222	ENST00000568444	CCDC30	Q5VVM6	783 aa		18.35	■□□□□ 0.53
KLHDC4-222	ENST00000568444	CHMP4A	Q9BY43	222 aa		18.35	■□□□□ 0.53
KLHDC4-222	ENST00000568444	NUP188	Q5SRE5	1749 aa		18.35	■□□□□ 0.53
KLHDC4-222	ENST00000568444	CRKL	P46109	303 aa	Known RBP	18.34	■□□□□ 0.53
KLHDC4-222	ENST00000568444	STK31	Q9BXU1	1019 aa		18.34	■□□□□ 0.53
KLHDC4-222	ENST00000568444	A1BG	P04217	495 aa		18.33	■□□□□ 0.52
KLHDC4-222	ENST00000568444	HMGB2	P26583	209 aa	Known RBP	18.33	■□□□□ 0.52
KLHDC4-222	ENST00000568444	PIP4K2A	P48426	406 aa	Predicted RBP	18.33	■□□□□ 0.52
KLHDC4-222	ENST00000568444	AK7	Q96M32	723 aa		18.33	■□□□□ 0.52
KLHDC4-222	ENST00000568444	CCDC87	Q9NVE4	849 aa		18.33	■□□□□ 0.52
KLHDC4-222	ENST00000568444	CHPF2	Q9P2E5	772 aa		18.33	■□□□□ 0.52
KLHDC4-222	ENST00000568444	CNTNAP4	Q9C0A0	1308 aa		18.32	■□□□□ 0.52
KLHDC4-222	ENST00000568444	MYL6B	P14649	208 aa		18.32	■□□□□ 0.52
KLHDC4-222	ENST00000568444	CANX	P27824	592 aa	Known RBP	18.32	■□□□□ 0.52
KLHDC4-222	ENST00000568444	ZBTB1	Q9Y2K1	713 aa		18.32	■□□□□ 0.52
KLHDC4-222	ENST00000568444	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.32	■□□□□ 0.52
KLHDC4-222	ENST00000568444	ERBB4	Q15303	1308 aa		18.31	■□□□□ 0.52
KLHDC4-222	ENST00000568444	ZNF428	Q96B54	188 aa		18.31	■□□□□ 0.52
KLHDC4-222	ENST00000568444	BCL2L13	Q9BXK5	485 aa		18.31	■□□□□ 0.52
KLHDC4-222	ENST00000568444	SMC4	Q9NTJ3	1288 aa		18.31	■□□□□ 0.52
KLHDC4-222	ENST00000568444	DBF4	Q9UBU7	674 aa	Predicted RBP	18.31	■□□□□ 0.52
KLHDC4-222	ENST00000568444	GNPAT	O15228	680 aa		18.3	■□□□□ 0.52
KLHDC4-222	ENST00000568444	ANXA1	P04083	346 aa		18.3	■□□□□ 0.52
KLHDC4-222	ENST00000568444	INTS5	Q6P9B9	1019 aa	Known RBP	18.3	■□□□□ 0.52
KLHDC4-222	ENST00000568444	NPM2	Q86SE8	214 aa	Known RBP	18.3	■□□□□ 0.52
KLHDC4-222	ENST00000568444	RARS	P54136	660 aa	Known RBP	18.29	■□□□□ 0.52
KLHDC4-222	ENST00000568444	PROSER3	Q2NL68	480 aa		18.29	■□□□□ 0.52
KLHDC4-222	ENST00000568444	ALDH1L2	Q3SY69	923 aa		18.29	■□□□□ 0.52
KLHDC4-222	ENST00000568444	RC3H1	Q5TC82	1133 aa	Known RBP	18.29	■□□□□ 0.52
KLHDC4-222	ENST00000568444	SSH1	Q8WYL5	1049 aa		18.29	■□□□□ 0.52
KLHDC4-222	ENST00000568444	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.29	■□□□□ 0.52
KLHDC4-222	ENST00000568444	RCAN3	Q9UKA8	241 aa		18.29	■□□□□ 0.52
KLHDC4-222	ENST00000568444	NBPF26	B4DH59	902 aa		18.28	■□□□□ 0.52
KLHDC4-222	ENST00000568444	SLC4A2	P04920	1241 aa		18.28	■□□□□ 0.52
KLHDC4-222	ENST00000568444	CENPB	P07199	599 aa	Predicted RBP	18.28	■□□□□ 0.52
KLHDC4-222	ENST00000568444	NBPF14	Q5TI25	921 aa		18.28	■□□□□ 0.52
KLHDC4-222	ENST00000568444	NBPF10	Q6P3W6	841 aa	Known RBP	18.28	■□□□□ 0.52
KLHDC4-222	ENST00000568444	NBPF15	Q8N660	670 aa		18.28	■□□□□ 0.52
KLHDC4-222	ENST00000568444	MYH14	Q7Z406	1995 aa	Known RBP	18.28	■□□□□ 0.52
KLHDC4-222	ENST00000568444	PHF14	O94880	888 aa		18.27	■□□□□ 0.52
KLHDC4-222	ENST00000568444	PDIA6	Q15084	440 aa		18.27	■□□□□ 0.52
KLHDC4-222	ENST00000568444	ZNF827	Q17R98	1081 aa		18.27	■□□□□ 0.52
KLHDC4-222	ENST00000568444	ARX	Q96QS3	562 aa		18.27	■□□□□ 0.52
KLHDC4-222	ENST00000568444	HYPK	Q9NX55	129 aa		18.27	■□□□□ 0.52
KLHDC4-222	ENST00000568444	STK32B	Q9NY57	414 aa		18.27	■□□□□ 0.52
KLHDC4-222	ENST00000568444	RTCB	Q9Y3I0	505 aa	Known RBP	18.27	■□□□□ 0.52
KLHDC4-222	ENST00000568444	IL6ST	P40189	918 aa	Predicted RBP	18.26	■□□□□ 0.51
KLHDC4-222	ENST00000568444	MRPL50	Q8N5N7	158 aa	Known RBP	18.26	■□□□□ 0.51
KLHDC4-222	ENST00000568444	TFCP2L1	Q9NZI6	479 aa		18.26	■□□□□ 0.51
KLHDC4-222	ENST00000568444	COL15A1	P39059	1388 aa		18.26	■□□□□ 0.51
KLHDC4-222	ENST00000568444	UBR3	Q6ZT12	1888 aa		18.26	■□□□□ 0.51
KLHDC4-222	ENST00000568444	RPS6KA4	O75676	772 aa		18.25	■□□□□ 0.51
KLHDC4-222	ENST00000568444	BCAR3	O75815	825 aa		18.25	■□□□□ 0.51
KLHDC4-222	ENST00000568444	AIMP1	Q12904	312 aa	Known RBP	18.25	■□□□□ 0.51
KLHDC4-222	ENST00000568444	AKT1S1	Q96B36	256 aa		18.25	■□□□□ 0.51
KLHDC4-222	ENST00000568444	PHAX	Q9H814	394 aa	Known RBP	18.25	■□□□□ 0.51
KLHDC4-222	ENST00000568444	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.25	■□□□□ 0.51
KLHDC4-222	ENST00000568444	TUBGCP6	Q96RT7	1819 aa		18.25	■□□□□ 0.51
KLHDC4-222	ENST00000568444	SMIM5	Q71RC9	77 aa		18.24	■□□□□ 0.51
KLHDC4-222	ENST00000568444	XAGE3	Q8WTP9	111 aa		18.24	■□□□□ 0.51
KLHDC4-222	ENST00000568444	EIF5	P55010	431 aa	Known RBP	18.23	■□□□□ 0.51
KLHDC4-222	ENST00000568444	FLII	Q13045	1269 aa		18.23	■□□□□ 0.51
KLHDC4-222	ENST00000568444	SLC15A2	Q16348	729 aa		18.23	■□□□□ 0.51
KLHDC4-222	ENST00000568444	G2E3	Q7L622	706 aa		18.23	■□□□□ 0.51
KLHDC4-222	ENST00000568444	KIF16B	Q96L93	1317 aa		18.23	■□□□□ 0.51
KLHDC4-222	ENST00000568444		A0A087WZG4	1122 aa		18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	SSFA2	P28290	1259 aa		18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	KIF6	Q6ZMV9	814 aa		18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	COPS6	Q7L5N1	327 aa		18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	LRP10	Q7Z4F1	713 aa		18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	AMIGO3	Q86WK7	504 aa		18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	FRAT1	Q92837	279 aa	Predicted RBP	18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	C4A	P0C0L4	1744 aa		18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	CACNA1F	O60840	1977 aa		18.22	■□□□□ 0.51
KLHDC4-222	ENST00000568444	MSH5	O43196	834 aa		18.21	■□□□□ 0.51
KLHDC4-222	ENST00000568444	FKBP5	Q13451	457 aa	Predicted RBP	18.21	■□□□□ 0.51
KLHDC4-222	ENST00000568444	TRAPPC3L	Q5T215	181 aa		18.21	■□□□□ 0.51
KLHDC4-222	ENST00000568444	TTLL7	Q6ZT98	887 aa		18.21	■□□□□ 0.51
KLHDC4-222	ENST00000568444	DZIP3	Q86Y13	1208 aa	Known RBP	18.21	■□□□□ 0.51
KLHDC4-222	ENST00000568444	QSER1	Q2KHR3	1735 aa		18.2	■□□□□ 0.5
KLHDC4-222	ENST00000568444	DDX58	O95786	925 aa	Known RBP	18.2	■□□□□ 0.5
KLHDC4-222	ENST00000568444	ADRA2B	P18089	450 aa		18.2	■□□□□ 0.5
KLHDC4-222	ENST00000568444	RFC4	P35249	363 aa		18.2	■□□□□ 0.5
KLHDC4-222	ENST00000568444	NOB1	Q9ULX3	412 aa	Known RBP	18.2	■□□□□ 0.5
KLHDC4-222	ENST00000568444	TBC1D2B	Q9UPU7	963 aa		18.2	■□□□□ 0.5
KLHDC4-222	ENST00000568444	SCN7A	Q01118	1682 aa		18.19	■□□□□ 0.5
KLHDC4-222	ENST00000568444	FLAD1	Q8NFF5	587 aa		18.19	■□□□□ 0.5
KLHDC4-222	ENST00000568444	ARHGEF1	Q92888	912 aa	Known RBP	18.19	■□□□□ 0.5
KLHDC4-222	ENST00000568444	ZBTB3	Q9H5J0	574 aa		18.19	■□□□□ 0.5
KLHDC4-222	ENST00000568444	BCOR	Q6W2J9	1755 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms