RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 STARD3NLO95772 234 aa10.84□□□□□ -0.67
HDGFL3-205ENST00000568129 TMPOP42166 694 aaKnown RBP10.84□□□□□ -0.67
HDGFL3-205ENST00000568129 BABAM1Q9NWV8 329 aa10.84□□□□□ -0.67
HDGFL3-205ENST00000568129 ADAMTS8Q9UP79 889 aa10.84□□□□□ -0.67
HDGFL3-205ENST00000568129 LAMB4A4D0S4 1761 aa10.84□□□□□ -0.67
HDGFL3-205ENST00000568129 TM4SF1P30408 202 aa10.83□□□□□ -0.68
HDGFL3-205ENST00000568129 RFC4P35249 363 aa10.83□□□□□ -0.68
HDGFL3-205ENST00000568129 MSL1Q68DK7 614 aa10.83□□□□□ -0.68
HDGFL3-205ENST00000568129 PNISRQ8TF01 805 aaKnown RBP10.83□□□□□ -0.68
HDGFL3-205ENST00000568129 RUNDC1Q96C34 613 aa10.83□□□□□ -0.68
HDGFL3-205ENST00000568129 NARFQ9UHQ1 456 aa10.83□□□□□ -0.68
HDGFL3-205ENST00000568129 ZBTB1Q9Y2K1 713 aa10.83□□□□□ -0.68
HDGFL3-205ENST00000568129 SNRPA1P09661 255 aaKnown RBP10.82□□□□□ -0.68
HDGFL3-205ENST00000568129 IL6STP40189 918 aaPredicted RBP10.82□□□□□ -0.68
HDGFL3-205ENST00000568129 USP16Q9Y5T5 823 aa10.82□□□□□ -0.68
HDGFL3-205ENST00000568129 BCORQ6W2J9 1755 aa10.82□□□□□ -0.68
HDGFL3-205ENST00000568129 MAPK8IP3Q9UPT6 1336 aa10.82□□□□□ -0.68
HDGFL3-205ENST00000568129 COL15A1P39059 1388 aa10.81□□□□□ -0.68
HDGFL3-205ENST00000568129 UTRNP46939 3433 aa10.81□□□□□ -0.68
HDGFL3-205ENST00000568129 MMP10P09238 476 aa10.81□□□□□ -0.68
HDGFL3-205ENST00000568129 RIPK4P57078 832 aa10.81□□□□□ -0.68
HDGFL3-205ENST00000568129 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
HDGFL3-205ENST00000568129 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
HDGFL3-205ENST00000568129 SCN7AQ01118 1682 aa10.81□□□□□ -0.68
HDGFL3-205ENST00000568129 RGL2O15211 777 aa10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 EIF4A1P60842 406 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 LMOD3Q0VAK6 560 aa10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 FKBP8Q14318 412 aa10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 NLGN2Q8NFZ4 835 aa10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 SRP68Q9UHB9 627 aaKnown RBP10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 N4BP2Q86UW6 1770 aaPredicted RBP10.8□□□□□ -0.68
HDGFL3-205ENST00000568129 NUP98P52948 1817 aa10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 C10orf71Q711Q0 1435 aa10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 A0A087WZG4 1122 aa10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 PRAMEF22A3QJZ6 481 aa10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 ZPR1O75312 459 aa10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 TGFB2P61812 414 aa10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 WDR43Q15061 677 aaKnown RBP eCLIP10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 CCDC184Q52MB2 194 aa10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 GOLGB1Q14789 3259 aaKnown RBP10.79□□□□□ -0.68
HDGFL3-205ENST00000568129 DCAF8L1A6NGE4 600 aa10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 NBPF26B4DH59 902 aa10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 POLRMTO00411 1230 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 CHL1O00533 1208 aa10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 A1BGP04217 495 aa10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 DDR1Q08345 913 aa10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 NBPF10Q6P3W6 841 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 NBPF15Q8N660 670 aa10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 THUMPD2Q9BTF0 503 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 MIS18AQ9NYP9 233 aa10.78□□□□□ -0.68
HDGFL3-205ENST00000568129 DLEC1Q9Y238 1755 aa10.77□□□□□ -0.68
HDGFL3-205ENST00000568129 CAMTA2O94983 1202 aa10.77□□□□□ -0.69
HDGFL3-205ENST00000568129 CANXP27824 592 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-205ENST00000568129 CCDC146Q8IYE0 955 aa10.77□□□□□ -0.69
HDGFL3-205ENST00000568129 PARP3Q9Y6F1 533 aa10.77□□□□□ -0.69
HDGFL3-205ENST00000568129 ANKRD31Q8N7Z5 1873 aa10.76□□□□□ -0.69
HDGFL3-205ENST00000568129 PXDNLA1KZ92 1463 aa10.76□□□□□ -0.69
HDGFL3-205ENST00000568129 ZNF853P0CG23 659 aa10.76□□□□□ -0.69
HDGFL3-205ENST00000568129 YBX3P16989 372 aaKnown RBP eCLIP10.76□□□□□ -0.69
HDGFL3-205ENST00000568129 KCNA3P22001 575 aa10.76□□□□□ -0.69
HDGFL3-205ENST00000568129 NFIXQ14938 502 aa10.76□□□□□ -0.69
HDGFL3-205ENST00000568129 CLEC4GQ6UXB4 293 aa10.76□□□□□ -0.69
HDGFL3-205ENST00000568129 ANP32CO43423 234 aa10.75□□□□□ -0.69
HDGFL3-205ENST00000568129 GRIN3BO60391 1043 aa10.75□□□□□ -0.69
HDGFL3-205ENST00000568129 CCDC27Q2M243 656 aa10.75□□□□□ -0.69
HDGFL3-205ENST00000568129 LRP10Q7Z4F1 713 aa10.75□□□□□ -0.69
HDGFL3-205ENST00000568129 ERBB4Q15303 1308 aa10.75□□□□□ -0.69
HDGFL3-205ENST00000568129 CACNA1FO60840 1977 aa10.74□□□□□ -0.69
HDGFL3-205ENST00000568129 APAF1O14727 1248 aa10.74□□□□□ -0.69
HDGFL3-205ENST00000568129 PDIA6Q15084 440 aa10.74□□□□□ -0.69
HDGFL3-205ENST00000568129 CFAP44Q96MT7 982 aa10.74□□□□□ -0.69
HDGFL3-205ENST00000568129 TSPYL4Q9UJ04 414 aa10.74□□□□□ -0.69
HDGFL3-205ENST00000568129 TBC1D2BQ9UPU7 963 aa10.74□□□□□ -0.69
HDGFL3-205ENST00000568129 RRP7AQ9Y3A4 280 aaKnown RBP10.74□□□□□ -0.69
HDGFL3-205ENST00000568129 SBF1O95248 1867 aa10.74□□□□□ -0.69
HDGFL3-205ENST00000568129 ERVV-1B6SEH8 477 aa10.73□□□□□ -0.69
HDGFL3-205ENST00000568129 SERPINB2P05120 415 aa10.73□□□□□ -0.69
HDGFL3-205ENST00000568129 GPR162Q16538 588 aa10.73□□□□□ -0.69
HDGFL3-205ENST00000568129 TBC1D9BQ66K14 1250 aa10.73□□□□□ -0.69
HDGFL3-205ENST00000568129 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
HDGFL3-205ENST00000568129 HOXB7P09629 217 aa10.72□□□□□ -0.69
HDGFL3-205ENST00000568129 NEUROD2Q15784 382 aa10.72□□□□□ -0.69
HDGFL3-205ENST00000568129 KLHL34Q8N239 644 aa10.72□□□□□ -0.69
HDGFL3-205ENST00000568129 A0A0G2JLW4 131 aa10.71□□□□□ -0.69
HDGFL3-205ENST00000568129 DPEP1P16444 411 aa10.71□□□□□ -0.69
HDGFL3-205ENST00000568129 IFT57Q9NWB7 429 aa10.71□□□□□ -0.69
HDGFL3-205ENST00000568129 ARFGEF2Q9Y6D5 1785 aa10.71□□□□□ -0.69
HDGFL3-205ENST00000568129 ANKRD36CQ5JPF3 1778 aa10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 CARMIL3Q8ND23 1372 aa10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 MAP3K15Q6ZN16 1313 aa10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 KLRG2A4D1S0 409 aaPredicted RBP10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 YY1P25490 414 aa10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 PIP4K2AP48426 406 aaPredicted RBP10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 CALD1Q05682 793 aaKnown RBP10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 SETDB2Q96T68 719 aa10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 BRIP1Q9BX63 1249 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms