RNA–Protein interactions for RNA: ENST00000568006.1

GBP3-211, Transcript of guanylate binding protein 3, humanhuman

TSL 5

Gene GBP3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-211ENST00000568006 SPON1Q9HCB6 807 aa9.82□□□□□ -0.84
GBP3-211ENST00000568006 MYH14Q7Z406 1995 aaKnown RBP9.82□□□□□ -0.84
GBP3-211ENST00000568006 ATP6V1AP38606 617 aa9.81□□□□□ -0.84
GBP3-211ENST00000568006 AMIGO3Q86WK7 504 aa9.81□□□□□ -0.84
GBP3-211ENST00000568006 C4AP0C0L4 1744 aa9.81□□□□□ -0.84
GBP3-211ENST00000568006 CNTNAP4Q9C0A0 1308 aa9.81□□□□□ -0.84
GBP3-211ENST00000568006 KDM3BQ7LBC6 1761 aa9.8□□□□□ -0.84
GBP3-211ENST00000568006 RC3H1Q5TC82 1133 aaKnown RBP9.8□□□□□ -0.84
GBP3-211ENST00000568006 COL23A1Q86Y22 540 aaPredicted RBP9.8□□□□□ -0.84
GBP3-211ENST00000568006 TFCP2L1Q9NZI6 479 aa9.8□□□□□ -0.84
GBP3-211ENST00000568006 ZBTB7AO95365 584 aa9.79□□□□□ -0.84
GBP3-211ENST00000568006 SSFA2P28290 1259 aa9.79□□□□□ -0.84
GBP3-211ENST00000568006 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
GBP3-211ENST00000568006 FLAD1Q8NFF5 587 aa9.79□□□□□ -0.84
GBP3-211ENST00000568006 PNNQ9H307 717 aaKnown RBP9.79□□□□□ -0.84
GBP3-211ENST00000568006 PPP4R2Q9NY27 417 aa9.79□□□□□ -0.84
GBP3-211ENST00000568006 SLC39A6Q13433 755 aa9.78□□□□□ -0.84
GBP3-211ENST00000568006 NFE2L2Q16236 605 aa9.78□□□□□ -0.84
GBP3-211ENST00000568006 AK7Q96M32 723 aa9.78□□□□□ -0.84
GBP3-211ENST00000568006 HEG1Q9ULI3 1381 aa9.77□□□□□ -0.84
GBP3-211ENST00000568006 HAX1O00165 279 aa9.77□□□□□ -0.85
GBP3-211ENST00000568006 PTCD1O75127 700 aaKnown RBP9.77□□□□□ -0.85
GBP3-211ENST00000568006 TEFQ10587 303 aa9.77□□□□□ -0.85
GBP3-211ENST00000568006 ZNF790Q6PG37 636 aa9.77□□□□□ -0.85
GBP3-211ENST00000568006 LAMB4A4D0S4 1761 aa9.76□□□□□ -0.85
GBP3-211ENST00000568006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.76□□□□□ -0.85
GBP3-211ENST00000568006 RPS6KA4O75676 772 aa9.76□□□□□ -0.85
GBP3-211ENST00000568006 DCTN1Q14203 1278 aa9.76□□□□□ -0.85
GBP3-211ENST00000568006 INTS5Q6P9B9 1019 aaKnown RBP9.76□□□□□ -0.85
GBP3-211ENST00000568006 MCM10Q7L590 875 aa9.76□□□□□ -0.85
GBP3-211ENST00000568006 RTF1Q92541 710 aaKnown RBP9.76□□□□□ -0.85
GBP3-211ENST00000568006 ZNF496Q96IT1 587 aaPredicted RBP9.76□□□□□ -0.85
GBP3-211ENST00000568006 BTBD11A6QL63 1104 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 GNPATO15228 680 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 NEFMP07197 916 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 CYP19A1P11511 503 aaPredicted RBP9.75□□□□□ -0.85
GBP3-211ENST00000568006 DEKP35659 375 aaKnown RBP9.75□□□□□ -0.85
GBP3-211ENST00000568006 TMPOP42166 694 aaKnown RBP9.75□□□□□ -0.85
GBP3-211ENST00000568006 CRKLP46109 303 aaKnown RBP9.75□□□□□ -0.85
GBP3-211ENST00000568006 CCDC184Q52MB2 194 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 SMIM5Q71RC9 77 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 DNAJC10Q8IXB1 793 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 RUNDC1Q96C34 613 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 ADAMTS8Q9UP79 889 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 MAPK8IP3Q9UPT6 1336 aa9.75□□□□□ -0.85
GBP3-211ENST00000568006 KCNQ3O43525 872 aa9.74□□□□□ -0.85
GBP3-211ENST00000568006 TTC5Q8N0Z6 440 aa9.74□□□□□ -0.85
GBP3-211ENST00000568006 RTCBQ9Y3I0 505 aaKnown RBP9.74□□□□□ -0.85
GBP3-211ENST00000568006 KIF13BQ9NQT8 1826 aa9.74□□□□□ -0.85
GBP3-211ENST00000568006 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
GBP3-211ENST00000568006 PHF14O94880 888 aa9.73□□□□□ -0.85
GBP3-211ENST00000568006 WDR43Q15061 677 aaKnown RBP eCLIP9.73□□□□□ -0.85
GBP3-211ENST00000568006 TAF7Q15545 349 aaPredicted RBP9.73□□□□□ -0.85
GBP3-211ENST00000568006 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
GBP3-211ENST00000568006 FMNL2Q96PY5 1086 aa9.73□□□□□ -0.85
GBP3-211ENST00000568006 ARXQ96QS3 562 aa9.73□□□□□ -0.85
GBP3-211ENST00000568006 CCDC87Q9NVE4 849 aa9.73□□□□□ -0.85
GBP3-211ENST00000568006 SCN7AQ01118 1682 aa9.73□□□□□ -0.85
GBP3-211ENST00000568006 BCORQ6W2J9 1755 aa9.73□□□□□ -0.85
GBP3-211ENST00000568006 RIPK4P57078 832 aa9.72□□□□□ -0.85
GBP3-211ENST00000568006 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
GBP3-211ENST00000568006 PNISRQ8TF01 805 aaKnown RBP9.72□□□□□ -0.85
GBP3-211ENST00000568006 TEX13AQ9BXU3 409 aaPredicted RBP9.72□□□□□ -0.85
GBP3-211ENST00000568006 BABAM1Q9NWV8 329 aa9.72□□□□□ -0.85
GBP3-211ENST00000568006 FBXO3Q9UK99 471 aa9.72□□□□□ -0.85
GBP3-211ENST00000568006 TRIM35Q9UPQ4 493 aa9.72□□□□□ -0.85
GBP3-211ENST00000568006 ZBTB1Q9Y2K1 713 aa9.72□□□□□ -0.85
GBP3-211ENST00000568006 NOP58Q9Y2X3 529 aaKnown RBP9.72□□□□□ -0.85
GBP3-211ENST00000568006 KIAA1551Q9HCM1 1747 aa9.72□□□□□ -0.85
GBP3-211ENST00000568006 USP42Q9H9J4 1324 aaKnown RBP9.72□□□□□ -0.85
GBP3-211ENST00000568006 NRXN2Q9P2S2 1712 aa9.71□□□□□ -0.85
GBP3-211ENST00000568006 GYS1P13807 737 aa9.71□□□□□ -0.86
GBP3-211ENST00000568006 POLD1P28340 1107 aa9.71□□□□□ -0.86
GBP3-211ENST00000568006 LMOD3Q0VAK6 560 aa9.71□□□□□ -0.86
GBP3-211ENST00000568006 CCDC146Q8IYE0 955 aa9.71□□□□□ -0.86
GBP3-211ENST00000568006 SYT17Q9BSW7 474 aa9.71□□□□□ -0.86
GBP3-211ENST00000568006 THUMPD2Q9BTF0 503 aaKnown RBP9.71□□□□□ -0.86
GBP3-211ENST00000568006 FHDC1Q9C0D6 1143 aaPredicted RBP9.71□□□□□ -0.86
GBP3-211ENST00000568006 PPP1R1BQ9UD71 204 aaPredicted RBP9.71□□□□□ -0.86
GBP3-211ENST00000568006 COL15A1P39059 1388 aa9.71□□□□□ -0.86
GBP3-211ENST00000568006 STARD3NLO95772 234 aa9.7□□□□□ -0.86
GBP3-211ENST00000568006 EIF5P55010 431 aaKnown RBP9.7□□□□□ -0.86
GBP3-211ENST00000568006 EIF4A1P60842 406 aaKnown RBP9.7□□□□□ -0.86
GBP3-211ENST00000568006 MSL1Q68DK7 614 aa9.7□□□□□ -0.86
GBP3-211ENST00000568006 CHADLQ6NUI6 762 aa9.7□□□□□ -0.86
GBP3-211ENST00000568006 USP16Q9Y5T5 823 aa9.7□□□□□ -0.86
GBP3-211ENST00000568006 PRAMEF22A3QJZ6 481 aa9.69□□□□□ -0.86
GBP3-211ENST00000568006 SNRPA1P09661 255 aaKnown RBP9.69□□□□□ -0.86
GBP3-211ENST00000568006 RFC4P35249 363 aa9.69□□□□□ -0.86
GBP3-211ENST00000568006 IL6STP40189 918 aaPredicted RBP9.69□□□□□ -0.86
GBP3-211ENST00000568006 NLGN1Q8N2Q7 840 aa9.69□□□□□ -0.86
GBP3-211ENST00000568006 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
GBP3-211ENST00000568006 RRP7AQ9Y3A4 280 aaKnown RBP9.69□□□□□ -0.86
GBP3-211ENST00000568006 C10orf71Q711Q0 1435 aa9.68□□□□□ -0.86
GBP3-211ENST00000568006 CHL1O00533 1208 aa9.68□□□□□ -0.86
GBP3-211ENST00000568006 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
GBP3-211ENST00000568006 MIS18AQ9NYP9 233 aa9.68□□□□□ -0.86
GBP3-211ENST00000568006 SRP68Q9UHB9 627 aaKnown RBP9.68□□□□□ -0.86
GBP3-211ENST00000568006 NARFQ9UHQ1 456 aa9.68□□□□□ -0.86
GBP3-211ENST00000568006 CD2APQ9Y5K6 639 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms