RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
COMMD4-219ENST00000567399 NGEFQ8N5V2 710 aa19.72■□□□□ 0.75
COMMD4-219ENST00000567399 SLC16A10Q8TF71 515 aa19.72■□□□□ 0.75
COMMD4-219ENST00000567399 IFT57Q9NWB7 429 aa19.72■□□□□ 0.75
COMMD4-219ENST00000567399 ZNF330Q9Y3S2 320 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-219ENST00000567399 UBR2Q8IWV8 1755 aa19.71■□□□□ 0.75
COMMD4-219ENST00000567399 INTS5Q6P9B9 1019 aaKnown RBP19.71■□□□□ 0.75
COMMD4-219ENST00000567399 ARXQ96QS3 562 aa19.71■□□□□ 0.75
COMMD4-219ENST00000567399 MTFR1LQ9H019 292 aa19.71■□□□□ 0.75
COMMD4-219ENST00000567399 USP16Q9Y5T5 823 aa19.71■□□□□ 0.75
COMMD4-219ENST00000567399 PRAMEF22A3QJZ6 481 aa19.7■□□□□ 0.74
COMMD4-219ENST00000567399 ADRA2BP18089 450 aa19.7■□□□□ 0.74
COMMD4-219ENST00000567399 TJP1Q07157 1748 aa19.7■□□□□ 0.74
COMMD4-219ENST00000567399 GIGYF1O75420 1035 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-219ENST00000567399 A1BGP04217 495 aa19.69■□□□□ 0.74
COMMD4-219ENST00000567399 MBIPQ9NS73 344 aa19.69■□□□□ 0.74
COMMD4-219ENST00000567399 PPP1R1BQ9UD71 204 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-219ENST00000567399 ZBTB1Q9Y2K1 713 aa19.69■□□□□ 0.74
COMMD4-219ENST00000567399 COL5A3P25940 1745 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-219ENST00000567399 EIF2S2P20042 333 aaKnown RBP19.68■□□□□ 0.74
COMMD4-219ENST00000567399 AMIGO3Q86WK7 504 aa19.68■□□□□ 0.74
COMMD4-219ENST00000567399 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
COMMD4-219ENST00000567399 KDM3BQ7LBC6 1761 aa19.67■□□□□ 0.74
COMMD4-219ENST00000567399 ZPR1O75312 459 aa19.67■□□□□ 0.74
COMMD4-219ENST00000567399 POLD1P28340 1107 aa19.67■□□□□ 0.74
COMMD4-219ENST00000567399 MSL1Q68DK7 614 aa19.67■□□□□ 0.74
COMMD4-219ENST00000567399 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
COMMD4-219ENST00000567399 A0A087WZG4 1122 aa19.66■□□□□ 0.74
COMMD4-219ENST00000567399 QSER1Q2KHR3 1735 aa19.65■□□□□ 0.74
COMMD4-219ENST00000567399 ZNF853P0CG23 659 aa19.65■□□□□ 0.74
COMMD4-219ENST00000567399 PIP4K2AP48426 406 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-219ENST00000567399 SOS1Q07889 1333 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-219ENST00000567399 IL16Q14005 1332 aa19.65■□□□□ 0.74
COMMD4-219ENST00000567399 CICQ96RK0 1608 aaPredicted RBP19.65■□□□□ 0.74
COMMD4-219ENST00000567399 CASZ1Q86V15 1759 aa19.65■□□□□ 0.74
COMMD4-219ENST00000567399 TUBGCP6Q96RT7 1819 aa19.65■□□□□ 0.74
COMMD4-219ENST00000567399 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-219ENST00000567399 NECTIN2Q92692 538 aa19.64■□□□□ 0.73
COMMD4-219ENST00000567399 UBR3Q6ZT12 1888 aa19.63■□□□□ 0.73
COMMD4-219ENST00000567399 COL15A1P39059 1388 aa19.63■□□□□ 0.73
COMMD4-219ENST00000567399 ELL2O00472 640 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-219ENST00000567399 KRT24Q2M2I5 525 aa19.63■□□□□ 0.73
COMMD4-219ENST00000567399 TSR2Q969E8 191 aaKnown RBP19.63■□□□□ 0.73
COMMD4-219ENST00000567399 MYL6BP14649 208 aa19.62■□□□□ 0.73
COMMD4-219ENST00000567399 DUSP27Q5VZP5 1158 aa19.62■□□□□ 0.73
COMMD4-219ENST00000567399 NLGN1Q8N2Q7 840 aa19.62■□□□□ 0.73
COMMD4-219ENST00000567399 MYH16Q9H6N6 1097 aa19.62■□□□□ 0.73
COMMD4-219ENST00000567399 EIF5P55010 431 aaKnown RBP19.61■□□□□ 0.73
COMMD4-219ENST00000567399 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
COMMD4-219ENST00000567399 SRP68Q9UHB9 627 aaKnown RBP19.61■□□□□ 0.73
COMMD4-219ENST00000567399 TBC1D2BQ9UPU7 963 aa19.61■□□□□ 0.73
COMMD4-219ENST00000567399 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
COMMD4-219ENST00000567399 USPL1Q5W0Q7 1092 aa19.6■□□□□ 0.73
COMMD4-219ENST00000567399 KLHL34Q8N239 644 aa19.6■□□□□ 0.73
COMMD4-219ENST00000567399 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
COMMD4-219ENST00000567399 NARFQ9UHQ1 456 aa19.6■□□□□ 0.73
COMMD4-219ENST00000567399 MYH14Q7Z406 1995 aaKnown RBP19.6■□□□□ 0.73
COMMD4-219ENST00000567399 USP42Q9H9J4 1324 aaKnown RBP19.59■□□□□ 0.73
COMMD4-219ENST00000567399 HOXB7P09629 217 aa19.59■□□□□ 0.73
COMMD4-219ENST00000567399 DZIP3Q86Y13 1208 aaKnown RBP19.59■□□□□ 0.73
COMMD4-219ENST00000567399 NBPF26B4DH59 902 aa19.58■□□□□ 0.72
COMMD4-219ENST00000567399 GYS1P13807 737 aa19.58■□□□□ 0.72
COMMD4-219ENST00000567399 PTGER2P43116 358 aa19.58■□□□□ 0.72
COMMD4-219ENST00000567399 HNRNPUQ00839 825 aaKnown RBP eCLIP19.58■□□□□ 0.72
COMMD4-219ENST00000567399 NBPF10Q6P3W6 841 aaKnown RBP19.58■□□□□ 0.72
COMMD4-219ENST00000567399 NBPF15Q8N660 670 aa19.58■□□□□ 0.72
COMMD4-219ENST00000567399 ERBB4Q15303 1308 aa19.57■□□□□ 0.72
COMMD4-219ENST00000567399 KIF6Q6ZMV9 814 aa19.57■□□□□ 0.72
COMMD4-219ENST00000567399 C8orf58Q8NAV2 365 aa19.57■□□□□ 0.72
COMMD4-219ENST00000567399 FANCIQ9NVI1 1328 aa19.56■□□□□ 0.72
COMMD4-219ENST00000567399 PARP3Q9Y6F1 533 aa19.56■□□□□ 0.72
COMMD4-219ENST00000567399 LAMB4A4D0S4 1761 aa19.56■□□□□ 0.72
COMMD4-219ENST00000567399 MMP10P09238 476 aa19.55■□□□□ 0.72
COMMD4-219ENST00000567399 FKBP8Q14318 412 aa19.55■□□□□ 0.72
COMMD4-219ENST00000567399 TWISTNBQ3B726 338 aaPredicted RBP19.55■□□□□ 0.72
COMMD4-219ENST00000567399 E9PSI1 815 aa19.54■□□□□ 0.72
COMMD4-219ENST00000567399 ANXA1P04083 346 aa19.54■□□□□ 0.72
COMMD4-219ENST00000567399 AIMP1Q12904 312 aaKnown RBP19.54■□□□□ 0.72
COMMD4-219ENST00000567399 CCDC30Q5VVM6 783 aa19.54■□□□□ 0.72
COMMD4-219ENST00000567399 BICDL1Q6ZP65 573 aa19.54■□□□□ 0.72
COMMD4-219ENST00000567399 SPINK5Q9NQ38 1064 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-219ENST00000567399 CHPF2Q9P2E5 772 aa19.54■□□□□ 0.72
COMMD4-219ENST00000567399 DBF4Q9UBU7 674 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-219ENST00000567399 ZNF652Q9Y2D9 606 aa19.54■□□□□ 0.72
COMMD4-219ENST00000567399 LRP5O75197 1615 aa19.54■□□□□ 0.72
COMMD4-219ENST00000567399 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
COMMD4-219ENST00000567399 TSPYL6Q8N831 410 aa19.53■□□□□ 0.72
COMMD4-219ENST00000567399 SGIP1Q9BQI5 828 aa19.53■□□□□ 0.72
COMMD4-219ENST00000567399 DDX21Q9NR30 783 aaKnown RBP eCLIP19.53■□□□□ 0.72
COMMD4-219ENST00000567399 ZNF521Q96K83 1311 aa19.52■□□□□ 0.72
COMMD4-219ENST00000567399 C4AP0C0L4 1744 aa19.52■□□□□ 0.72
COMMD4-219ENST00000567399 STK31Q9BXU1 1019 aa19.52■□□□□ 0.72
COMMD4-219ENST00000567399 NPHP1O15259 732 aa19.51■□□□□ 0.71
COMMD4-219ENST00000567399 CAMTA2O94983 1202 aa19.51■□□□□ 0.71
COMMD4-219ENST00000567399 PROSER3Q2NL68 480 aa19.51■□□□□ 0.71
COMMD4-219ENST00000567399 HYPKQ9NX55 129 aa19.51■□□□□ 0.71
COMMD4-219ENST00000567399 PDIA6Q15084 440 aa19.5■□□□□ 0.71
COMMD4-219ENST00000567399 TTLL7Q6ZT98 887 aa19.5■□□□□ 0.71
COMMD4-219ENST00000567399 COPS6Q7L5N1 327 aa19.5■□□□□ 0.71
COMMD4-219ENST00000567399 XAGE3Q8WTP9 111 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms