RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 ZNF496Q96IT1 587 aaPredicted RBP21.36■■□□□ 1.01
SCAMP2-208ENST00000566557 HEG1Q9ULI3 1381 aa21.36■■□□□ 1.01
SCAMP2-208ENST00000566557 DNAJC10Q8IXB1 793 aa21.35■■□□□ 1.01
SCAMP2-208ENST00000566557 CALD1Q05682 793 aaKnown RBP21.34■■□□□ 1.01
SCAMP2-208ENST00000566557 QSER1Q2KHR3 1735 aa21.34■■□□□ 1.01
SCAMP2-208ENST00000566557 GPBP1L1Q9HC44 474 aaPredicted RBP21.32■■□□□ 1
SCAMP2-208ENST00000566557 LAMB4A4D0S4 1761 aa21.32■■□□□ 1
SCAMP2-208ENST00000566557 UBR3Q6ZT12 1888 aa21.32■■□□□ 1
SCAMP2-208ENST00000566557 GNPATO15228 680 aa21.31■■□□□ 1
SCAMP2-208ENST00000566557 MSH5O43196 834 aa21.31■■□□□ 1
SCAMP2-208ENST00000566557 PHF14O94880 888 aa21.31■■□□□ 1
SCAMP2-208ENST00000566557 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
SCAMP2-208ENST00000566557 CRKLP46109 303 aaKnown RBP21.3■■□□□ 1
SCAMP2-208ENST00000566557 CCDC27Q2M243 656 aa21.3■■□□□ 1
SCAMP2-208ENST00000566557 WWC1Q8IX03 1113 aa21.3■■□□□ 1
SCAMP2-208ENST00000566557 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
SCAMP2-208ENST00000566557 HSPA6P17066 643 aa21.29■■□□□ 1
SCAMP2-208ENST00000566557 ATP10DQ9P241 1426 aa21.29■■□□□ 1
SCAMP2-208ENST00000566557 EIF4A1P60842 406 aaKnown RBP21.28■■□□□ 1
SCAMP2-208ENST00000566557 GNAI1P63096 354 aa21.28■■□□□ 1
SCAMP2-208ENST00000566557 IFT57Q9NWB7 429 aa21.28■■□□□ 1
SCAMP2-208ENST00000566557 BABAM1Q9NWV8 329 aa21.28■■□□□ 1
SCAMP2-208ENST00000566557 MYH14Q7Z406 1995 aaKnown RBP21.27■■□□□ 1
SCAMP2-208ENST00000566557 PRAMEF22A3QJZ6 481 aa21.27■■□□□ 1
SCAMP2-208ENST00000566557 STARD3NLO95772 234 aa21.27■■□□□ 1
SCAMP2-208ENST00000566557 SNRPA1P09661 255 aaKnown RBP21.27■■□□□ 1
SCAMP2-208ENST00000566557 CYP19A1P11511 503 aaPredicted RBP21.27■■□□□ 1
SCAMP2-208ENST00000566557 SMIM5Q71RC9 77 aa21.27■■□□□ 1
SCAMP2-208ENST00000566557 ZNF526Q8TF50 670 aaPredicted RBP21.27■■□□□ 1
SCAMP2-208ENST00000566557 CFAP44Q96MT7 982 aa21.27■■□□□ 1
SCAMP2-208ENST00000566557 TEX13AQ9BXU3 409 aaPredicted RBP21.27■■□□□ 1
SCAMP2-208ENST00000566557 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
SCAMP2-208ENST00000566557 CHL1O00533 1208 aa21.26■□□□□ 0.99
SCAMP2-208ENST00000566557 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
SCAMP2-208ENST00000566557 NGEFQ8N5V2 710 aa21.26■□□□□ 0.99
SCAMP2-208ENST00000566557 MBIPQ9NS73 344 aa21.26■□□□□ 0.99
SCAMP2-208ENST00000566557 RTCBQ9Y3I0 505 aaKnown RBP21.26■□□□□ 0.99
SCAMP2-208ENST00000566557 RC3H1Q5TC82 1133 aaKnown RBP21.25■□□□□ 0.99
SCAMP2-208ENST00000566557 C4AP0C0L4 1744 aa21.24■□□□□ 0.99
SCAMP2-208ENST00000566557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.24■□□□□ 0.99
SCAMP2-208ENST00000566557 CANXP27824 592 aaKnown RBP21.24■□□□□ 0.99
SCAMP2-208ENST00000566557 SSFA2P28290 1259 aa21.24■□□□□ 0.99
SCAMP2-208ENST00000566557 AMIGO3Q86WK7 504 aa21.24■□□□□ 0.99
SCAMP2-208ENST00000566557 ZBTB1Q9Y2K1 713 aa21.24■□□□□ 0.99
SCAMP2-208ENST00000566557 ZNF330Q9Y3S2 320 aaPredicted RBP21.24■□□□□ 0.99
SCAMP2-208ENST00000566557 MSL1Q68DK7 614 aa21.23■□□□□ 0.99
SCAMP2-208ENST00000566557 COL23A1Q86Y22 540 aaPredicted RBP21.23■□□□□ 0.99
SCAMP2-208ENST00000566557 FLAD1Q8NFF5 587 aa21.23■□□□□ 0.99
SCAMP2-208ENST00000566557 TSR2Q969E8 191 aaKnown RBP21.23■□□□□ 0.99
SCAMP2-208ENST00000566557 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
SCAMP2-208ENST00000566557 RPS6KA4O75676 772 aa21.22■□□□□ 0.99
SCAMP2-208ENST00000566557 ZNF853P0CG23 659 aa21.22■□□□□ 0.99
SCAMP2-208ENST00000566557 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
SCAMP2-208ENST00000566557 INTS5Q6P9B9 1019 aaKnown RBP21.22■□□□□ 0.99
SCAMP2-208ENST00000566557 IL16Q14005 1332 aa21.22■□□□□ 0.99
SCAMP2-208ENST00000566557 WDR63Q8IWG1 891 aa21.21■□□□□ 0.99
SCAMP2-208ENST00000566557 A1BGP04217 495 aa21.2■□□□□ 0.98
SCAMP2-208ENST00000566557 PIP4K2AP48426 406 aaPredicted RBP21.2■□□□□ 0.98
SCAMP2-208ENST00000566557 TRAPPC3LQ5T215 181 aa21.2■□□□□ 0.98
SCAMP2-208ENST00000566557 COL15A1P39059 1388 aa21.2■□□□□ 0.98
SCAMP2-208ENST00000566557 EIF2S2P20042 333 aaKnown RBP21.19■□□□□ 0.98
SCAMP2-208ENST00000566557 HNRNPUQ00839 825 aaKnown RBP eCLIP21.19■□□□□ 0.98
SCAMP2-208ENST00000566557 NPM2Q86SE8 214 aaKnown RBP21.19■□□□□ 0.98
SCAMP2-208ENST00000566557 CD2APQ9Y5K6 639 aa21.19■□□□□ 0.98
SCAMP2-208ENST00000566557 SOS1Q07889 1333 aaPredicted RBP21.19■□□□□ 0.98
SCAMP2-208ENST00000566557 ADRA2BP18089 450 aa21.18■□□□□ 0.98
SCAMP2-208ENST00000566557 RFC4P35249 363 aa21.18■□□□□ 0.98
SCAMP2-208ENST00000566557 NECTIN2Q92692 538 aa21.18■□□□□ 0.98
SCAMP2-208ENST00000566557 FANCIQ9NVI1 1328 aa21.18■□□□□ 0.98
SCAMP2-208ENST00000566557 COL24A1Q17RW2 1714 aa21.16■□□□□ 0.98
SCAMP2-208ENST00000566557 ZNF521Q96K83 1311 aa21.16■□□□□ 0.98
SCAMP2-208ENST00000566557 ELL2O00472 640 aaPredicted RBP21.16■□□□□ 0.98
SCAMP2-208ENST00000566557 DUSP27Q5VZP5 1158 aa21.16■□□□□ 0.98
SCAMP2-208ENST00000566557 ARHGEF1Q92888 912 aaKnown RBP21.16■□□□□ 0.98
SCAMP2-208ENST00000566557 MYH16Q9H6N6 1097 aa21.16■□□□□ 0.98
SCAMP2-208ENST00000566557 MYL6BP14649 208 aa21.14■□□□□ 0.97
SCAMP2-208ENST00000566557 IL6STP40189 918 aaPredicted RBP21.14■□□□□ 0.97
SCAMP2-208ENST00000566557 GOLGA2Q08379 1002 aa21.14■□□□□ 0.97
SCAMP2-208ENST00000566557 HDGFL1Q5TGJ6 251 aa21.14■□□□□ 0.97
SCAMP2-208ENST00000566557 SPINK5Q9NQ38 1064 aaPredicted RBP21.14■□□□□ 0.97
SCAMP2-208ENST00000566557 SCN7AQ01118 1682 aa21.14■□□□□ 0.97
SCAMP2-208ENST00000566557 C8orf58Q8NAV2 365 aa21.13■□□□□ 0.97
SCAMP2-208ENST00000566557 SRP68Q9UHB9 627 aaKnown RBP21.13■□□□□ 0.97
SCAMP2-208ENST00000566557 WWC3Q9ULE0 1092 aa21.13■□□□□ 0.97
SCAMP2-208ENST00000566557 ADCY9O60503 1353 aa21.12■□□□□ 0.97
SCAMP2-208ENST00000566557 A0A087WZG4 1122 aa21.12■□□□□ 0.97
SCAMP2-208ENST00000566557 NBPF26B4DH59 902 aa21.12■□□□□ 0.97
SCAMP2-208ENST00000566557 ZPR1O75312 459 aa21.12■□□□□ 0.97
SCAMP2-208ENST00000566557 HOXB7P09629 217 aa21.12■□□□□ 0.97
SCAMP2-208ENST00000566557 EIF5P55010 431 aaKnown RBP21.12■□□□□ 0.97
SCAMP2-208ENST00000566557 NBPF10Q6P3W6 841 aaKnown RBP21.12■□□□□ 0.97
SCAMP2-208ENST00000566557 NBPF15Q8N660 670 aa21.12■□□□□ 0.97
SCAMP2-208ENST00000566557 ERBB4Q15303 1308 aa21.11■□□□□ 0.97
SCAMP2-208ENST00000566557 USP42Q9H9J4 1324 aaKnown RBP21.11■□□□□ 0.97
SCAMP2-208ENST00000566557 BCORQ6W2J9 1755 aa21.11■□□□□ 0.97
SCAMP2-208ENST00000566557 E9PSI1 815 aa21.1■□□□□ 0.97
SCAMP2-208ENST00000566557 KIF3CO14782 793 aa21.1■□□□□ 0.97
SCAMP2-208ENST00000566557 ANXA1P04083 346 aa21.1■□□□□ 0.97
SCAMP2-208ENST00000566557 EXOSC9Q06265 439 aaKnown RBP21.1■□□□□ 0.97
SCAMP2-208ENST00000566557 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms