RNA–Protein interactions for RNA: ENST00000566408.5

STUB1-208, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2

Gene STUB1, Length 684 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-208ENST00000566408 SOS1Q07889 1333 aaPredicted RBP22.48■■□□□ 1.19
STUB1-208ENST00000566408 USP16Q9Y5T5 823 aa22.47■■□□□ 1.19
STUB1-208ENST00000566408 STARD3NLO95772 234 aa22.46■■□□□ 1.19
STUB1-208ENST00000566408 C8orf58Q8NAV2 365 aa22.46■■□□□ 1.19
STUB1-208ENST00000566408 QSER1Q2KHR3 1735 aa22.45■■□□□ 1.19
STUB1-208ENST00000566408 UBR3Q6ZT12 1888 aa22.45■■□□□ 1.19
STUB1-208ENST00000566408 CRKLP46109 303 aaKnown RBP22.45■■□□□ 1.18
STUB1-208ENST00000566408 ZNF827Q17R98 1081 aa22.45■■□□□ 1.18
STUB1-208ENST00000566408 DUSP27Q5VZP5 1158 aa22.45■■□□□ 1.18
STUB1-208ENST00000566408 INTS5Q6P9B9 1019 aaKnown RBP22.44■■□□□ 1.18
STUB1-208ENST00000566408 TUBGCP6Q96RT7 1819 aa22.43■■□□□ 1.18
STUB1-208ENST00000566408 SLC15A2Q16348 729 aa22.43■■□□□ 1.18
STUB1-208ENST00000566408 TSPYL6Q8N831 410 aa22.43■■□□□ 1.18
STUB1-208ENST00000566408 CCDC87Q9NVE4 849 aa22.43■■□□□ 1.18
STUB1-208ENST00000566408 EXOSC9Q06265 439 aaKnown RBP22.42■■□□□ 1.18
STUB1-208ENST00000566408 NBPF14Q5TI25 921 aa22.42■■□□□ 1.18
STUB1-208ENST00000566408 STK32BQ9NY57 414 aa22.42■■□□□ 1.18
STUB1-208ENST00000566408 ERBB4Q15303 1308 aa22.41■■□□□ 1.18
STUB1-208ENST00000566408 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
STUB1-208ENST00000566408 RPS6KA4O75676 772 aa22.4■■□□□ 1.18
STUB1-208ENST00000566408 TWISTNBQ3B726 338 aaPredicted RBP22.4■■□□□ 1.18
STUB1-208ENST00000566408 AK7Q96M32 723 aa22.4■■□□□ 1.18
STUB1-208ENST00000566408 A1BGP04217 495 aa22.39■■□□□ 1.17
STUB1-208ENST00000566408 AMIGO3Q86WK7 504 aa22.39■■□□□ 1.17
STUB1-208ENST00000566408 ELL2O00472 640 aaPredicted RBP22.38■■□□□ 1.17
STUB1-208ENST00000566408 VAMP4O75379 141 aa22.38■■□□□ 1.17
STUB1-208ENST00000566408 SSFA2P28290 1259 aa22.38■■□□□ 1.17
STUB1-208ENST00000566408 NBPF26B4DH59 902 aa22.37■■□□□ 1.17
STUB1-208ENST00000566408 GNPATO15228 680 aa22.37■■□□□ 1.17
STUB1-208ENST00000566408 IL6STP40189 918 aaPredicted RBP22.37■■□□□ 1.17
STUB1-208ENST00000566408 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
STUB1-208ENST00000566408 PDIA6Q15084 440 aa22.37■■□□□ 1.17
STUB1-208ENST00000566408 HDGFL1Q5TGJ6 251 aa22.37■■□□□ 1.17
STUB1-208ENST00000566408 NBPF10Q6P3W6 841 aaKnown RBP22.37■■□□□ 1.17
STUB1-208ENST00000566408 LRP10Q7Z4F1 713 aa22.37■■□□□ 1.17
STUB1-208ENST00000566408 NBPF15Q8N660 670 aa22.37■■□□□ 1.17
STUB1-208ENST00000566408 CHMP4AQ9BY43 222 aa22.37■■□□□ 1.17
STUB1-208ENST00000566408 TFCP2L1Q9NZI6 479 aa22.37■■□□□ 1.17
STUB1-208ENST00000566408 RTCBQ9Y3I0 505 aaKnown RBP22.37■■□□□ 1.17
STUB1-208ENST00000566408 PNPLA7Q6ZV29 1317 aa22.36■■□□□ 1.17
STUB1-208ENST00000566408 CT47B1P0C2W7 299 aaPredicted RBP22.36■■□□□ 1.17
STUB1-208ENST00000566408 ADRA2BP18089 450 aa22.36■■□□□ 1.17
STUB1-208ENST00000566408 EIF2S2P20042 333 aaKnown RBP22.36■■□□□ 1.17
STUB1-208ENST00000566408 FLAD1Q8NFF5 587 aa22.35■■□□□ 1.17
STUB1-208ENST00000566408 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
STUB1-208ENST00000566408 YTHDC1Q96MU7 727 aaKnown RBP22.34■■□□□ 1.17
STUB1-208ENST00000566408 DDX21Q9NR30 783 aaKnown RBP eCLIP22.34■■□□□ 1.17
STUB1-208ENST00000566408 CASZ1Q86V15 1759 aa22.34■■□□□ 1.17
STUB1-208ENST00000566408 COL15A1P39059 1388 aa22.34■■□□□ 1.17
STUB1-208ENST00000566408 C4AP0C0L4 1744 aa22.34■■□□□ 1.17
STUB1-208ENST00000566408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.33■■□□□ 1.17
STUB1-208ENST00000566408 CCDC30Q5VVM6 783 aa22.33■■□□□ 1.17
STUB1-208ENST00000566408 ZNF428Q96B54 188 aa22.33■■□□□ 1.17
STUB1-208ENST00000566408 DBF4Q9UBU7 674 aaPredicted RBP22.33■■□□□ 1.17
STUB1-208ENST00000566408 CACNA1FO60840 1977 aa22.32■■□□□ 1.16
STUB1-208ENST00000566408 CHPF2Q9P2E5 772 aa22.32■■□□□ 1.16
STUB1-208ENST00000566408 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
STUB1-208ENST00000566408 R3HDM1Q15032 1099 aaKnown RBP22.31■■□□□ 1.16
STUB1-208ENST00000566408 PROSER3Q2NL68 480 aa22.31■■□□□ 1.16
STUB1-208ENST00000566408 TRAPPC3LQ5T215 181 aa22.31■■□□□ 1.16
STUB1-208ENST00000566408 SMIM5Q71RC9 77 aa22.31■■□□□ 1.16
STUB1-208ENST00000566408 COL23A1Q86Y22 540 aaPredicted RBP22.31■■□□□ 1.16
STUB1-208ENST00000566408 NECTIN2Q92692 538 aa22.31■■□□□ 1.16
STUB1-208ENST00000566408 ARHGEF1Q92888 912 aaKnown RBP22.31■■□□□ 1.16
STUB1-208ENST00000566408 PHF14O94880 888 aa22.29■■□□□ 1.16
STUB1-208ENST00000566408 A0A087WZG4 1122 aa22.28■■□□□ 1.16
STUB1-208ENST00000566408 ANXA1P04083 346 aa22.28■■□□□ 1.16
STUB1-208ENST00000566408 HYPKQ9NX55 129 aa22.28■■□□□ 1.16
STUB1-208ENST00000566408 SCN7AQ01118 1682 aa22.27■■□□□ 1.16
STUB1-208ENST00000566408 MYL6BP14649 208 aa22.27■■□□□ 1.16
STUB1-208ENST00000566408 PDGFDQ9GZP0 370 aaPredicted RBP22.27■■□□□ 1.16
STUB1-208ENST00000566408 BCORQ6W2J9 1755 aa22.27■■□□□ 1.16
STUB1-208ENST00000566408 USP42Q9H9J4 1324 aaKnown RBP22.27■■□□□ 1.16
STUB1-208ENST00000566408 PSDA5PKW4 1024 aaPredicted RBP22.26■■□□□ 1.15
STUB1-208ENST00000566408 RGL2O15211 777 aa22.26■■□□□ 1.15
STUB1-208ENST00000566408 ALDH1L2Q3SY69 923 aa22.26■■□□□ 1.15
STUB1-208ENST00000566408 SLC16A10Q8TF71 515 aa22.26■■□□□ 1.15
STUB1-208ENST00000566408 STK31Q9BXU1 1019 aa22.26■■□□□ 1.15
STUB1-208ENST00000566408 NARFQ9UHQ1 456 aa22.26■■□□□ 1.15
STUB1-208ENST00000566408 COL24A1Q17RW2 1714 aa22.26■■□□□ 1.15
STUB1-208ENST00000566408 RFC4P35249 363 aa22.25■■□□□ 1.15
STUB1-208ENST00000566408 CAMTA2O94983 1202 aa22.24■■□□□ 1.15
STUB1-208ENST00000566408 DZIP3Q86Y13 1208 aaKnown RBP22.24■■□□□ 1.15
STUB1-208ENST00000566408 SLC4A2P04920 1241 aa22.23■■□□□ 1.15
STUB1-208ENST00000566408 BRPF1P55201 1214 aaPredicted RBP22.23■■□□□ 1.15
STUB1-208ENST00000566408 TTLL7Q6ZT98 887 aa22.23■■□□□ 1.15
STUB1-208ENST00000566408 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
STUB1-208ENST00000566408 XAGE3Q8WTP9 111 aa22.23■■□□□ 1.15
STUB1-208ENST00000566408 SSH1Q8WYL5 1049 aa22.23■■□□□ 1.15
STUB1-208ENST00000566408 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
STUB1-208ENST00000566408 ERVV-1B6SEH8 477 aa22.22■■□□□ 1.15
STUB1-208ENST00000566408 TCERG1O14776 1098 aaKnown RBP22.22■■□□□ 1.15
STUB1-208ENST00000566408 GYS1P13807 737 aa22.22■■□□□ 1.15
STUB1-208ENST00000566408 RARSP54136 660 aaKnown RBP22.22■■□□□ 1.15
STUB1-208ENST00000566408 COPS6Q7L5N1 327 aa22.22■■□□□ 1.15
STUB1-208ENST00000566408 MRPL50Q8N5N7 158 aaKnown RBP22.22■■□□□ 1.15
STUB1-208ENST00000566408 PHAXQ9H814 394 aaKnown RBP22.22■■□□□ 1.15
STUB1-208ENST00000566408 BCL2L12Q9HB09 334 aa22.22■■□□□ 1.15
STUB1-208ENST00000566408 SRP68Q9UHB9 627 aaKnown RBP22.22■■□□□ 1.15
STUB1-208ENST00000566408 TBC1D2BQ9UPU7 963 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms