RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
LSM3P5-201ENST00000566307 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
LSM3P5-201ENST00000566307 GLI3P10071 1580 aa11.17□□□□□ -0.62
LSM3P5-201ENST00000566307 RPAP2Q8IXW5 612 aaPredicted RBP11.17□□□□□ -0.62
LSM3P5-201ENST00000566307 BTG4Q9NY30 223 aa11.17□□□□□ -0.62
LSM3P5-201ENST00000566307 SLIT2O94813 1529 aa11.17□□□□□ -0.62
LSM3P5-201ENST00000566307 TNS2Q63HR2 1409 aa11.17□□□□□ -0.62
LSM3P5-201ENST00000566307 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
LSM3P5-201ENST00000566307 KCNQ3O43525 872 aa11.16□□□□□ -0.62
LSM3P5-201ENST00000566307 G2E3Q7L622 706 aa11.16□□□□□ -0.62
LSM3P5-201ENST00000566307 GCC1Q96CN9 775 aa11.16□□□□□ -0.62
LSM3P5-201ENST00000566307 JCADQ9P266 1359 aa11.16□□□□□ -0.62
LSM3P5-201ENST00000566307 CABP4P57796 275 aa11.15□□□□□ -0.62
LSM3P5-201ENST00000566307 NFATC2IPQ8NCF5 419 aa11.15□□□□□ -0.62
LSM3P5-201ENST00000566307 FMNL2Q96PY5 1086 aa11.15□□□□□ -0.62
LSM3P5-201ENST00000566307 DDX21Q9NR30 783 aaKnown RBP eCLIP11.15□□□□□ -0.62
LSM3P5-201ENST00000566307 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
LSM3P5-201ENST00000566307 HYPKQ9NX55 129 aa11.15□□□□□ -0.62
LSM3P5-201ENST00000566307 RBM19Q9Y4C8 960 aaKnown RBP11.15□□□□□ -0.62
LSM3P5-201ENST00000566307 GNAI3P08754 354 aa11.14□□□□□ -0.63
LSM3P5-201ENST00000566307 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
LSM3P5-201ENST00000566307 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
LSM3P5-201ENST00000566307 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
LSM3P5-201ENST00000566307 ANKRD44Q8N8A2 993 aa11.14□□□□□ -0.63
LSM3P5-201ENST00000566307 SPOCK2Q92563 424 aa11.14□□□□□ -0.63
LSM3P5-201ENST00000566307 C5P01031 1676 aa11.14□□□□□ -0.63
LSM3P5-201ENST00000566307 TOGARAM1Q9Y4F4 1720 aa11.13□□□□□ -0.63
LSM3P5-201ENST00000566307 UBAP1LF5GYI3 381 aa11.13□□□□□ -0.63
LSM3P5-201ENST00000566307 BARGINQ6ZT62 677 aa11.13□□□□□ -0.63
LSM3P5-201ENST00000566307 BACH2Q9BYV9 841 aa11.13□□□□□ -0.63
LSM3P5-201ENST00000566307 CHPF2Q9P2E5 772 aa11.13□□□□□ -0.63
LSM3P5-201ENST00000566307 PDZRN3Q9UPQ7 1066 aa11.13□□□□□ -0.63
LSM3P5-201ENST00000566307 KCPQ6ZWJ8 1503 aa11.13□□□□□ -0.63
LSM3P5-201ENST00000566307 SPATA31A1Q5TZJ5 1347 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 ALDH1L1O75891 902 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 NUCB1Q02818 461 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 PDIA6Q15084 440 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 SIRT2Q8IXJ6 389 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 DNAAF4Q8WXU2 420 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 DCTPP1Q9H773 170 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 HDAC5Q9UQL6 1122 aa11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
LSM3P5-201ENST00000566307 SPATA31A5Q5VU36 1347 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 SPATA31A7Q8IWB4 1347 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 HMMRO75330 724 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 DDX58O95786 925 aaKnown RBP11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 EIF2S2P20042 333 aaKnown RBP11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 PDE4AP27815 886 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 FAM161AQ3B820 660 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 CEP85Q6P2H3 762 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 KSR2Q6VAB6 950 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 CERKQ8TCT0 537 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 PHAXQ9H814 394 aaKnown RBP11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 ADCY9O60503 1353 aa11.11□□□□□ -0.63
LSM3P5-201ENST00000566307 F6X3S4 739 aa11.1□□□□□ -0.63
LSM3P5-201ENST00000566307 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
LSM3P5-201ENST00000566307 GNAI2P04899 355 aa11.1□□□□□ -0.63
LSM3P5-201ENST00000566307 BEND3Q5T5X7 828 aa11.1□□□□□ -0.63
LSM3P5-201ENST00000566307 LRP10Q7Z4F1 713 aa11.1□□□□□ -0.63
LSM3P5-201ENST00000566307 MEIS3Q99687 375 aa11.1□□□□□ -0.63
LSM3P5-201ENST00000566307 SRCIN1Q9C0H9 1055 aa11.1□□□□□ -0.63
LSM3P5-201ENST00000566307 HAX1O00165 279 aa11.09□□□□□ -0.63
LSM3P5-201ENST00000566307 EXOC5O00471 708 aa11.09□□□□□ -0.63
LSM3P5-201ENST00000566307 SLC39A6Q13433 755 aa11.09□□□□□ -0.63
LSM3P5-201ENST00000566307 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
LSM3P5-201ENST00000566307 ITGB4P16144 1822 aa11.09□□□□□ -0.63
LSM3P5-201ENST00000566307 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
LSM3P5-201ENST00000566307 BCL9O00512 1426 aa11.09□□□□□ -0.63
LSM3P5-201ENST00000566307 UTYO14607 1347 aa11.09□□□□□ -0.63
LSM3P5-201ENST00000566307 PI4KAP2A4QPH2 592 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 PIP4K2BP78356 416 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 CHD1LQ86WJ1 897 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 UNC5CLQ8IV45 518 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 FNBP4Q8N3X1 1017 aaPredicted RBP11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 PI4KAP1Q8N8J0 262 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 LINS1Q8NG48 757 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 NECTIN2Q92692 538 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 USP44Q9H0E7 712 aa11.08□□□□□ -0.64
LSM3P5-201ENST00000566307 COL15A1P39059 1388 aa11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 RGS3P49796 1198 aa11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 ATP8B2P98198 1209 aa11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 MTX1Q13505 466 aa11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 VPS72Q15906 364 aa11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 DDX54Q8TDD1 881 aaKnown RBP11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
LSM3P5-201ENST00000566307 BCL9LQ86UU0 1499 aa11.06□□□□□ -0.64
LSM3P5-201ENST00000566307 PRAMEF22A3QJZ6 481 aa11.06□□□□□ -0.64
LSM3P5-201ENST00000566307 UBTFL1P0CB47 393 aaPredicted RBP11.06□□□□□ -0.64
LSM3P5-201ENST00000566307 PROSER3Q2NL68 480 aa11.06□□□□□ -0.64
LSM3P5-201ENST00000566307 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
LSM3P5-201ENST00000566307 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
LSM3P5-201ENST00000566307 USP16Q9Y5T5 823 aa11.06□□□□□ -0.64
LSM3P5-201ENST00000566307 ZNF831Q5JPB2 1677 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms