RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 URB2Q14146 1524 aaKnown RBP7.07□□□□□ -1.28
LINC00561-201ENST00000565815 GNRH1P01148 92 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 PHKA2P46019 1235 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 ESYT1Q9BSJ8 1104 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 ATAD2Q6PL18 1390 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 SOBPA7XYQ1 873 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 FOXK2Q01167 660 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 CENPCQ03188 943 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
LINC00561-201ENST00000565815 CLN3Q13286 438 aa7.06□□□□□ -1.28
LINC00561-201ENST00000565815 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
LINC00561-201ENST00000565815 WDR97A6NE52 1622 aa7.06□□□□□ -1.28
LINC00561-201ENST00000565815 ZBTB39O15060 712 aa7.06□□□□□ -1.28
LINC00561-201ENST00000565815 PPP1R12BO60237 982 aaPredicted RBP7.06□□□□□ -1.28
LINC00561-201ENST00000565815 SND1Q7KZF4 910 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00561-201ENST00000565815 ATCAYQ86WG3 371 aa7.06□□□□□ -1.28
LINC00561-201ENST00000565815 SLC4A9Q96Q91 983 aa7.06□□□□□ -1.28
LINC00561-201ENST00000565815 QTRT2Q9H974 415 aaKnown RBP7.06□□□□□ -1.28
LINC00561-201ENST00000565815 GNEQ9Y223 722 aaKnown RBP7.06□□□□□ -1.28
LINC00561-201ENST00000565815 CAPN5O15484 640 aaPredicted RBP7.05□□□□□ -1.28
LINC00561-201ENST00000565815 TXLNAP40222 546 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 PTGIRP43119 386 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 PRICKLE2Q7Z3G6 844 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 HCN4Q9Y3Q4 1203 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 SOWAHDA6NJG2 315 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 WASLO00401 505 aaPredicted RBP7.05□□□□□ -1.28
LINC00561-201ENST00000565815 PRR20EP86478 221 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 PRR20CP86479 221 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 PRR20DP86480 221 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 PRR20BP86481 221 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 PRR20AP86496 221 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 RGS22Q8NE09 1264 aa7.05□□□□□ -1.28
LINC00561-201ENST00000565815 C2orf49Q9BVC5 232 aaPredicted RBP7.05□□□□□ -1.28
LINC00561-201ENST00000565815 MTFR1Q15390 333 aa7.04□□□□□ -1.28
LINC00561-201ENST00000565815 FIGNL2A6NMB9 653 aa7.04□□□□□ -1.28
LINC00561-201ENST00000565815 XAGE2Q96GT9 111 aa7.04□□□□□ -1.28
LINC00561-201ENST00000565815 POLMQ9NP87 494 aaPredicted RBP7.04□□□□□ -1.28
LINC00561-201ENST00000565815 RHOQP17081 205 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 COX20Q5RI15 118 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 CYB5RLQ6IPT4 315 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 TRIM46Q7Z4K8 759 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 KLK14Q9P0G3 267 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 BIN2Q9UBW5 565 aaPredicted RBP7.03□□□□□ -1.28
LINC00561-201ENST00000565815 ARAP1Q96P48 1450 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 MPSTP25325 297 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 ARID4AP29374 1257 aaPredicted RBP7.03□□□□□ -1.28
LINC00561-201ENST00000565815 TAGLNQ01995 201 aaKnown RBP7.03□□□□□ -1.28
LINC00561-201ENST00000565815 L3MBTL2Q969R5 705 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 CABP1Q9NZU7 370 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 ZNF232Q9UNY5 417 aa7.03□□□□□ -1.28
LINC00561-201ENST00000565815 EML1O00423 815 aa7.02□□□□□ -1.29
LINC00561-201ENST00000565815 CCDC9Q9Y3X0 531 aaKnown RBP7.02□□□□□ -1.29
LINC00561-201ENST00000565815 BMP2P12643 396 aa7.02□□□□□ -1.29
LINC00561-201ENST00000565815 PLA2G4AP47712 749 aa7.02□□□□□ -1.29
LINC00561-201ENST00000565815 ARHGAP4P98171 946 aa7.02□□□□□ -1.29
LINC00561-201ENST00000565815 USP20Q9Y2K6 914 aa7.02□□□□□ -1.29
LINC00561-201ENST00000565815 TOP2AP11388 1531 aaKnown RBP7.01□□□□□ -1.29
LINC00561-201ENST00000565815 M0R2N6 131 aa7.01□□□□□ -1.29
LINC00561-201ENST00000565815 CCER1Q8TC90 406 aaPredicted RBP7.01□□□□□ -1.29
LINC00561-201ENST00000565815 TNFRSF10BO14763 440 aa7.01□□□□□ -1.29
LINC00561-201ENST00000565815 BACH1O14867 736 aa7.01□□□□□ -1.29
LINC00561-201ENST00000565815 IGFBP4P22692 258 aa7.01□□□□□ -1.29
LINC00561-201ENST00000565815 CCDC27Q2M243 656 aa7.01□□□□□ -1.29
LINC00561-201ENST00000565815 C4orf17Q53FE4 359 aa7.01□□□□□ -1.29
LINC00561-201ENST00000565815 POU4F2Q12837 409 aa7□□□□□ -1.29
LINC00561-201ENST00000565815 RNF217Q8TC41 542 aa7□□□□□ -1.29
LINC00561-201ENST00000565815 ZFP42Q96MM3 310 aa7□□□□□ -1.29
LINC00561-201ENST00000565815 ZSCAN10Q96SZ4 725 aaPredicted RBP7□□□□□ -1.29
LINC00561-201ENST00000565815 LCE2BO14633 110 aa7□□□□□ -1.29
LINC00561-201ENST00000565815 MRPL14Q6P1L8 145 aaKnown RBP7□□□□□ -1.29
LINC00561-201ENST00000565815 ETFBKMTQ8IXQ9 262 aa7□□□□□ -1.29
LINC00561-201ENST00000565815 HSH2DQ96JZ2 352 aa7□□□□□ -1.29
LINC00561-201ENST00000565815 BCS1LQ9Y276 419 aa7□□□□□ -1.29
LINC00561-201ENST00000565815 NOS2P35228 1153 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 ESCO1Q5FWF5 840 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 SLC27A3Q5K4L6 730 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 GLYCTKQ8IVS8 523 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 ALDH16A1Q8IZ83 802 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 C1orf216Q8TAB5 229 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 AIDAQ96BJ3 306 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 NLRP3Q96P20 1036 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 WIZO95785 1651 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 SPINT1O43278 529 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 GFRA3O60609 400 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 ZNF280CQ8ND82 737 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 CCDC87Q9NVE4 849 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 DNMT3LQ9UJW3 386 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 EIF4G3O43432 1585 aaKnown RBP6.99□□□□□ -1.29
LINC00561-201ENST00000565815 TOPBP1Q92547 1522 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 PDE4CQ08493 712 aa6.99□□□□□ -1.29
LINC00561-201ENST00000565815 TMEM214Q6NUQ4 689 aaKnown RBP6.99□□□□□ -1.29
LINC00561-201ENST00000565815 DNAJC14Q6Y2X3 702 aaPredicted RBP6.99□□□□□ -1.29
LINC00561-201ENST00000565815 DNMBPQ6XZF7 1577 aa6.98□□□□□ -1.29
LINC00561-201ENST00000565815 A6NHS1 94 aa6.98□□□□□ -1.29
LINC00561-201ENST00000565815 ICMTO60725 284 aa6.98□□□□□ -1.29
LINC00561-201ENST00000565815 PSMA6P60900 246 aaKnown RBP6.98□□□□□ -1.29
LINC00561-201ENST00000565815 DGKZQ13574 1117 aa6.98□□□□□ -1.29
LINC00561-201ENST00000565815 PHACTR1Q9C0D0 580 aa6.98□□□□□ -1.29
LINC00561-201ENST00000565815 SYNJ1O43426 1573 aa6.98□□□□□ -1.29
LINC00561-201ENST00000565815 PPARGC1BQ86YN6 1023 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms