RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 SIN3AQ96ST3 1273 aa12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 EYA1Q99502 592 aa12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 KDRP35968 1356 aa12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 TONSLQ96HA7 1378 aa12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 RGPD2P0DJD1 1756 aa12.63□□□□□ -0.39
VPS9D1-205ENST00000565452 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
VPS9D1-205ENST00000565452 RASSF10A6NK89 507 aa12.62□□□□□ -0.39
VPS9D1-205ENST00000565452 SERPINB2P05120 415 aa12.62□□□□□ -0.39
VPS9D1-205ENST00000565452 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
VPS9D1-205ENST00000565452 ITGB4P16144 1822 aa12.62□□□□□ -0.39
VPS9D1-205ENST00000565452 ZNF622Q969S3 477 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS9D1-205ENST00000565452 TAF1DQ9H5J8 278 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-205ENST00000565452 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
VPS9D1-205ENST00000565452 SBF1O95248 1867 aa12.61□□□□□ -0.39
VPS9D1-205ENST00000565452 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
VPS9D1-205ENST00000565452 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
VPS9D1-205ENST00000565452 C21orf2O43822 256 aa12.6□□□□□ -0.39
VPS9D1-205ENST00000565452 NFIXQ14938 502 aa12.6□□□□□ -0.39
VPS9D1-205ENST00000565452 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-205ENST00000565452 EAPPQ56P03 285 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-205ENST00000565452 INTS5Q6P9B9 1019 aaKnown RBP12.6□□□□□ -0.39
VPS9D1-205ENST00000565452 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-205ENST00000565452 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
VPS9D1-205ENST00000565452 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
VPS9D1-205ENST00000565452 ABT1Q9ULW3 272 aaKnown RBP12.59□□□□□ -0.39
VPS9D1-205ENST00000565452 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 PDE6BP35913 854 aa12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 ECE1P42892 770 aa12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 MTHFSP49914 203 aa12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 L3MBTL3Q96JM7 780 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 TAOK3Q9H2K8 898 aa12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 LTBP3Q9NS15 1303 aa12.58□□□□□ -0.4
VPS9D1-205ENST00000565452 SOGA3Q5TF21 947 aa12.57□□□□□ -0.4
VPS9D1-205ENST00000565452 GPR101Q96P66 508 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-205ENST00000565452 TESK2Q96S53 571 aa12.57□□□□□ -0.4
VPS9D1-205ENST00000565452 HACL1Q9UJ83 578 aa12.57□□□□□ -0.4
VPS9D1-205ENST00000565452 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-205ENST00000565452 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
VPS9D1-205ENST00000565452 BRIP1Q9BX63 1249 aa12.56□□□□□ -0.4
VPS9D1-205ENST00000565452 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
VPS9D1-205ENST00000565452 CNKSR1Q969H4 720 aa12.55□□□□□ -0.4
VPS9D1-205ENST00000565452 MCOLN1Q9GZU1 580 aa12.55□□□□□ -0.4
VPS9D1-205ENST00000565452 CA12O43570 354 aa12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 EPHX2P34913 555 aa12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 MAP2K2P36507 400 aa12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 MAP1SQ66K74 1059 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 ZNF530Q6P9A1 599 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 CAPNS2Q96L46 248 aa12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 SOS1Q07889 1333 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-205ENST00000565452 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
VPS9D1-205ENST00000565452 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
VPS9D1-205ENST00000565452 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
VPS9D1-205ENST00000565452 GRM1Q13255 1194 aa12.52□□□□□ -0.41
VPS9D1-205ENST00000565452 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
VPS9D1-205ENST00000565452 DDX21Q9NR30 783 aaKnown RBP eCLIP12.52□□□□□ -0.41
VPS9D1-205ENST00000565452 DGKZQ13574 1117 aa12.51□□□□□ -0.41
VPS9D1-205ENST00000565452 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
VPS9D1-205ENST00000565452 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
VPS9D1-205ENST00000565452 STYK1Q6J9G0 422 aa12.51□□□□□ -0.41
VPS9D1-205ENST00000565452 POLKQ9UBT6 870 aa12.51□□□□□ -0.41
VPS9D1-205ENST00000565452 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
VPS9D1-205ENST00000565452 A0A087WZG4 1122 aa12.5□□□□□ -0.41
VPS9D1-205ENST00000565452 NPHP1O15259 732 aa12.5□□□□□ -0.41
VPS9D1-205ENST00000565452 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
VPS9D1-205ENST00000565452 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
VPS9D1-205ENST00000565452 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
VPS9D1-205ENST00000565452 PRPF40BQ6NWY9 871 aaKnown RBP12.49□□□□□ -0.41
VPS9D1-205ENST00000565452 MASTLQ96GX5 879 aa12.49□□□□□ -0.41
VPS9D1-205ENST00000565452 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
VPS9D1-205ENST00000565452 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-205ENST00000565452 PRPF38BQ5VTL8 546 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-205ENST00000565452 COL15A1P39059 1388 aa12.47□□□□□ -0.41
VPS9D1-205ENST00000565452 SRGNP10124 158 aa12.47□□□□□ -0.41
VPS9D1-205ENST00000565452 CCDC93Q567U6 631 aa12.47□□□□□ -0.41
VPS9D1-205ENST00000565452 TBC1D9BQ66K14 1250 aa12.47□□□□□ -0.41
VPS9D1-205ENST00000565452 PRR5LQ6MZQ0 368 aa12.47□□□□□ -0.41
VPS9D1-205ENST00000565452 GPC2Q8N158 579 aa12.47□□□□□ -0.41
VPS9D1-205ENST00000565452 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
VPS9D1-205ENST00000565452 ZBTB1Q9Y2K1 713 aa12.47□□□□□ -0.41
VPS9D1-205ENST00000565452 STARD3NLO95772 234 aa12.46□□□□□ -0.41
VPS9D1-205ENST00000565452 ST5P78524 1137 aa12.46□□□□□ -0.41
VPS9D1-205ENST00000565452 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
VPS9D1-205ENST00000565452 RTKN2Q8IZC4 609 aa12.46□□□□□ -0.41
VPS9D1-205ENST00000565452 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
VPS9D1-205ENST00000565452 CCDC24Q8N4L8 307 aa12.46□□□□□ -0.41
VPS9D1-205ENST00000565452 C7orf43Q8WVR3 580 aa12.46□□□□□ -0.41
VPS9D1-205ENST00000565452 TLL2Q9Y6L7 1015 aa12.46□□□□□ -0.41
VPS9D1-205ENST00000565452 PDE4DIPQ5VU43 2346 aa12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 CARMIL3Q8ND23 1372 aa12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 RNF123Q5XPI4 1314 aa12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 ZNF541Q9H0D2 1346 aa12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 FZD9O00144 591 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms