RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 GPR162Q16538 588 aa29.56■■■□□ 2.32
CDH11-211ENST00000565210 ZBTB1Q9Y2K1 713 aa29.56■■■□□ 2.32
CDH11-211ENST00000565210 PARP3Q9Y6F1 533 aa29.56■■■□□ 2.32
CDH11-211ENST00000565210 USP42Q9H9J4 1324 aaKnown RBP29.55■■■□□ 2.32
CDH11-211ENST00000565210 SNRPA1P09661 255 aaKnown RBP29.55■■■□□ 2.32
CDH11-211ENST00000565210 RUNDC1Q96C34 613 aa29.55■■■□□ 2.32
CDH11-211ENST00000565210 MYH14Q7Z406 1995 aaKnown RBP29.54■■■□□ 2.32
CDH11-211ENST00000565210 KCNQ3O43525 872 aa29.54■■■□□ 2.32
CDH11-211ENST00000565210 SIPA1L3O60292 1781 aaPredicted RBP29.53■■■□□ 2.32
CDH11-211ENST00000565210 UBR2Q8IWV8 1755 aa29.53■■■□□ 2.32
CDH11-211ENST00000565210 TMPOP42166 694 aaKnown RBP29.52■■■□□ 2.32
CDH11-211ENST00000565210 NARFQ9UHQ1 456 aa29.52■■■□□ 2.32
CDH11-211ENST00000565210 ANP32CO43423 234 aa29.51■■■□□ 2.31
CDH11-211ENST00000565210 PELP1Q8IZL8 1130 aaKnown RBP29.51■■■□□ 2.31
CDH11-211ENST00000565210 NLGN2Q8NFZ4 835 aa29.51■■■□□ 2.31
CDH11-211ENST00000565210 SRP68Q9UHB9 627 aaKnown RBP29.51■■■□□ 2.31
CDH11-211ENST00000565210 ADAMTS8Q9UP79 889 aa29.51■■■□□ 2.31
CDH11-211ENST00000565210 COL15A1P39059 1388 aa29.51■■■□□ 2.31
CDH11-211ENST00000565210 IL6STP40189 918 aaPredicted RBP29.5■■■□□ 2.31
CDH11-211ENST00000565210 EIF5P55010 431 aaKnown RBP29.49■■■□□ 2.31
CDH11-211ENST00000565210 USPL1Q5W0Q7 1092 aa29.49■■■□□ 2.31
CDH11-211ENST00000565210 CCDC146Q8IYE0 955 aa29.49■■■□□ 2.31
CDH11-211ENST00000565210 FKBP8Q14318 412 aa29.47■■■□□ 2.31
CDH11-211ENST00000565210 MIS18AQ9NYP9 233 aa29.47■■■□□ 2.31
CDH11-211ENST00000565210 ZNF330Q9Y3S2 320 aaPredicted RBP29.47■■■□□ 2.31
CDH11-211ENST00000565210 USP16Q9Y5T5 823 aa29.47■■■□□ 2.31
CDH11-211ENST00000565210 GRIN3BO60391 1043 aa29.46■■■□□ 2.31
CDH11-211ENST00000565210 BABAM1Q9NWV8 329 aa29.46■■■□□ 2.31
CDH11-211ENST00000565210 A1BGP04217 495 aa29.45■■■□□ 2.31
CDH11-211ENST00000565210 TGFB2P61812 414 aa29.45■■■□□ 2.31
CDH11-211ENST00000565210 NEUROD2Q15784 382 aa29.45■■■□□ 2.31
CDH11-211ENST00000565210 THUMPD2Q9BTF0 503 aaKnown RBP29.45■■■□□ 2.31
CDH11-211ENST00000565210 YY1P25490 414 aa29.44■■■□□ 2.3
CDH11-211ENST00000565210 TSPYL4Q9UJ04 414 aa29.43■■■□□ 2.3
CDH11-211ENST00000565210 TM4SF1P30408 202 aa29.42■■■□□ 2.3
CDH11-211ENST00000565210 RRP7AQ9Y3A4 280 aaKnown RBP29.42■■■□□ 2.3
CDH11-211ENST00000565210 DLG5Q8TDM6 1919 aa29.41■■■□□ 2.3
CDH11-211ENST00000565210 C4AP0C0L4 1744 aa29.41■■■□□ 2.3
CDH11-211ENST00000565210 EIF4A1P60842 406 aaKnown RBP29.41■■■□□ 2.3
CDH11-211ENST00000565210 PRAMEF22A3QJZ6 481 aa29.38■■■□□ 2.29
CDH11-211ENST00000565210 GIGYF1O75420 1035 aaPredicted RBP29.38■■■□□ 2.29
CDH11-211ENST00000565210 TBC1D2BQ9UPU7 963 aa29.38■■■□□ 2.29
CDH11-211ENST00000565210 POLRMTO00411 1230 aaKnown RBP29.37■■■□□ 2.29
CDH11-211ENST00000565210 DDR1Q08345 913 aa29.36■■■□□ 2.29
CDH11-211ENST00000565210 NFIXQ14938 502 aa29.36■■■□□ 2.29
CDH11-211ENST00000565210 DZIP3Q86Y13 1208 aaKnown RBP29.36■■■□□ 2.29
CDH11-211ENST00000565210 BCL2L12Q9HB09 334 aa29.35■■■□□ 2.29
CDH11-211ENST00000565210 ZNF652Q9Y2D9 606 aa29.34■■■□□ 2.29
CDH11-211ENST00000565210 C10orf71Q711Q0 1435 aa29.34■■■□□ 2.29
CDH11-211ENST00000565210 SERPINB2P05120 415 aa29.33■■■□□ 2.29
CDH11-211ENST00000565210 CALD1Q05682 793 aaKnown RBP29.33■■■□□ 2.29
CDH11-211ENST00000565210 TRIM35Q9UPQ4 493 aa29.33■■■□□ 2.29
CDH11-211ENST00000565210 YBX3P16989 372 aaKnown RBP eCLIP29.32■■■□□ 2.28
CDH11-211ENST00000565210 CLEC4GQ6UXB4 293 aa29.32■■■□□ 2.28
CDH11-211ENST00000565210 BICDL1Q6ZP65 573 aa29.32■■■□□ 2.28
CDH11-211ENST00000565210 MRS2Q9HD23 443 aa29.32■■■□□ 2.28
CDH11-211ENST00000565210 APAF1O14727 1248 aa29.31■■■□□ 2.28
CDH11-211ENST00000565210 SETDB2Q96T68 719 aa29.31■■■□□ 2.28
CDH11-211ENST00000565210 LAS1LQ9Y4W2 734 aaKnown RBP29.31■■■□□ 2.28
CDH11-211ENST00000565210 A0A0G2JLW4 131 aa29.3■■■□□ 2.28
CDH11-211ENST00000565210 RGL2O15211 777 aa29.3■■■□□ 2.28
CDH11-211ENST00000565210 CAMTA2O94983 1202 aa29.3■■■□□ 2.28
CDH11-211ENST00000565210 PIP4K2AP48426 406 aaPredicted RBP29.3■■■□□ 2.28
CDH11-211ENST00000565210 ERBB4Q15303 1308 aa29.29■■■□□ 2.28
CDH11-211ENST00000565210 CHL1O00533 1208 aa29.29■■■□□ 2.28
CDH11-211ENST00000565210 NBPF26B4DH59 902 aa29.28■■■□□ 2.28
CDH11-211ENST00000565210 NPHP1O15259 732 aa29.28■■■□□ 2.28
CDH11-211ENST00000565210 DPEP1P16444 411 aa29.28■■■□□ 2.28
CDH11-211ENST00000565210 TBC1D9BQ66K14 1250 aa29.28■■■□□ 2.28
CDH11-211ENST00000565210 NBPF10Q6P3W6 841 aaKnown RBP29.28■■■□□ 2.28
CDH11-211ENST00000565210 NBPF15Q8N660 670 aa29.28■■■□□ 2.28
CDH11-211ENST00000565210 KDM3BQ7LBC6 1761 aa29.28■■■□□ 2.28
CDH11-211ENST00000565210 PXDNLA1KZ92 1463 aa29.26■■■□□ 2.27
CDH11-211ENST00000565210 CFAP44Q96MT7 982 aa29.26■■■□□ 2.27
CDH11-211ENST00000565210 PIM2Q9P1W9 311 aa29.26■■■□□ 2.27
CDH11-211ENST00000565210 CARMIL3Q8ND23 1372 aa29.26■■■□□ 2.27
CDH11-211ENST00000565210 CCDC184Q52MB2 194 aa29.25■■■□□ 2.27
CDH11-211ENST00000565210 WWC3Q9ULE0 1092 aa29.24■■■□□ 2.27
CDH11-211ENST00000565210 PDZRN3Q9UPQ7 1066 aa29.24■■■□□ 2.27
CDH11-211ENST00000565210 BCS1LQ9Y276 419 aa29.24■■■□□ 2.27
CDH11-211ENST00000565210 KIF13BQ9NQT8 1826 aa29.24■■■□□ 2.27
CDH11-211ENST00000565210 EIF2S2P20042 333 aaKnown RBP29.23■■■□□ 2.27
CDH11-211ENST00000565210 KIF6Q6ZMV9 814 aa29.23■■■□□ 2.27
CDH11-211ENST00000565210 NGEFQ8N5V2 710 aa29.23■■■□□ 2.27
CDH11-211ENST00000565210 MYL6BP14649 208 aa29.22■■■□□ 2.27
CDH11-211ENST00000565210 ERVV-1B6SEH8 477 aa29.21■■■□□ 2.27
CDH11-211ENST00000565210 GNAI1P63096 354 aa29.21■■■□□ 2.27
CDH11-211ENST00000565210 ST5P78524 1137 aa29.2■■■□□ 2.26
CDH11-211ENST00000565210 DALRD3Q5D0E6 543 aaKnown RBP29.2■■■□□ 2.26
CDH11-211ENST00000565210 LAMB4A4D0S4 1761 aa29.19■■■□□ 2.26
CDH11-211ENST00000565210 HOXB7P09629 217 aa29.19■■■□□ 2.26
CDH11-211ENST00000565210 PDE6BP35913 854 aa29.19■■■□□ 2.26
CDH11-211ENST00000565210 CNBD1Q8NA66 436 aa29.19■■■□□ 2.26
CDH11-211ENST00000565210 IFT57Q9NWB7 429 aa29.19■■■□□ 2.26
CDH11-211ENST00000565210 CHD4Q14839 1912 aa29.19■■■□□ 2.26
CDH11-211ENST00000565210 H0YIN7 160 aa29.18■■■□□ 2.26
CDH11-211ENST00000565210 KCNA3P22001 575 aa29.18■■■□□ 2.26
CDH11-211ENST00000565210 BRIP1Q9BX63 1249 aa29.18■■■□□ 2.26
CDH11-211ENST00000565210 NIP7Q9Y221 180 aaKnown RBP eCLIP29.18■■■□□ 2.26
CDH11-211ENST00000565210 SCN7AQ01118 1682 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms