RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 MYH14Q7Z406 1995 aaKnown RBP25.36■■□□□ 1.65
CBFB-204ENST00000563939 SOS1Q07889 1333 aaPredicted RBP25.36■■□□□ 1.65
CBFB-204ENST00000563939 PARP3Q9Y6F1 533 aa25.35■■□□□ 1.65
CBFB-204ENST00000563939 USP42Q9H9J4 1324 aaKnown RBP25.35■■□□□ 1.65
CBFB-204ENST00000563939 RIPK4P57078 832 aa25.34■■□□□ 1.65
CBFB-204ENST00000563939 CCDC146Q8IYE0 955 aa25.34■■□□□ 1.65
CBFB-204ENST00000563939 THUMPD2Q9BTF0 503 aaKnown RBP25.34■■□□□ 1.65
CBFB-204ENST00000563939 YY1P25490 414 aa25.33■■□□□ 1.65
CBFB-204ENST00000563939 FKBP8Q14318 412 aa25.33■■□□□ 1.65
CBFB-204ENST00000563939 USPL1Q5W0Q7 1092 aa25.33■■□□□ 1.65
CBFB-204ENST00000563939 ZNF330Q9Y3S2 320 aaPredicted RBP25.33■■□□□ 1.65
CBFB-204ENST00000563939 ADAMTS8Q9UP79 889 aa25.32■■□□□ 1.64
CBFB-204ENST00000563939 A1BGP04217 495 aa25.31■■□□□ 1.64
CBFB-204ENST00000563939 SNRPA1P09661 255 aaKnown RBP25.31■■□□□ 1.64
CBFB-204ENST00000563939 NPM2Q86SE8 214 aaKnown RBP25.31■■□□□ 1.64
CBFB-204ENST00000563939 PNISRQ8TF01 805 aaKnown RBP25.31■■□□□ 1.64
CBFB-204ENST00000563939 NARFQ9UHQ1 456 aa25.31■■□□□ 1.64
CBFB-204ENST00000563939 USP16Q9Y5T5 823 aa25.31■■□□□ 1.64
CBFB-204ENST00000563939 TMPOP42166 694 aaKnown RBP25.3■■□□□ 1.64
CBFB-204ENST00000563939 NEUROD2Q15784 382 aa25.3■■□□□ 1.64
CBFB-204ENST00000563939 COL15A1P39059 1388 aa25.3■■□□□ 1.64
CBFB-204ENST00000563939 A0A087WZG4 1122 aa25.29■■□□□ 1.64
CBFB-204ENST00000563939 PRAMEF22A3QJZ6 481 aa25.29■■□□□ 1.64
CBFB-204ENST00000563939 EIF5P55010 431 aaKnown RBP25.29■■□□□ 1.64
CBFB-204ENST00000563939 RRP7AQ9Y3A4 280 aaKnown RBP25.29■■□□□ 1.64
CBFB-204ENST00000563939 CICQ96RK0 1608 aaPredicted RBP25.29■■□□□ 1.64
CBFB-204ENST00000563939 SIPA1L3O60292 1781 aaPredicted RBP25.28■■□□□ 1.64
CBFB-204ENST00000563939 RUNDC1Q96C34 613 aa25.28■■□□□ 1.64
CBFB-204ENST00000563939 UBR2Q8IWV8 1755 aa25.28■■□□□ 1.64
CBFB-204ENST00000563939 WWC3Q9ULE0 1092 aa25.27■■□□□ 1.64
CBFB-204ENST00000563939 IL6STP40189 918 aaPredicted RBP25.26■■□□□ 1.63
CBFB-204ENST00000563939 LMOD3Q0VAK6 560 aa25.26■■□□□ 1.63
CBFB-204ENST00000563939 TBC1D2BQ9UPU7 963 aa25.26■■□□□ 1.63
CBFB-204ENST00000563939 YBX3P16989 372 aaKnown RBP eCLIP25.25■■□□□ 1.634e-6■□□□□ 11.2
CBFB-204ENST00000563939 TM4SF1P30408 202 aa25.25■■□□□ 1.63
CBFB-204ENST00000563939 GRIN3BO60391 1043 aa25.24■■□□□ 1.63
CBFB-204ENST00000563939 PIP4K2AP48426 406 aaPredicted RBP25.24■■□□□ 1.63
CBFB-204ENST00000563939 DDR1Q08345 913 aa25.24■■□□□ 1.63
CBFB-204ENST00000563939 A0A0G2JLW4 131 aa25.22■■□□□ 1.63
CBFB-204ENST00000563939 TGFB2P61812 414 aa25.22■■□□□ 1.63
CBFB-204ENST00000563939 NFIXQ14938 502 aa25.22■■□□□ 1.63
CBFB-204ENST00000563939 BICDL1Q6ZP65 573 aa25.22■■□□□ 1.63
CBFB-204ENST00000563939 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
CBFB-204ENST00000563939 TSPYL4Q9UJ04 414 aa25.22■■□□□ 1.63
CBFB-204ENST00000563939 C4AP0C0L4 1744 aa25.21■■□□□ 1.63
CBFB-204ENST00000563939 POLRMTO00411 1230 aaKnown RBP25.21■■□□□ 1.63
CBFB-204ENST00000563939 ANP32CO43423 234 aa25.21■■□□□ 1.63
CBFB-204ENST00000563939 EIF4A1P60842 406 aaKnown RBP25.21■■□□□ 1.63
CBFB-204ENST00000563939 DLG5Q8TDM6 1919 aa25.2■■□□□ 1.62
CBFB-204ENST00000563939 GIGYF1O75420 1035 aaPredicted RBP25.19■■□□□ 1.62
CBFB-204ENST00000563939 DPEP1P16444 411 aa25.18■■□□□ 1.62
CBFB-204ENST00000563939 DZIP3Q86Y13 1208 aaKnown RBP25.18■■□□□ 1.62
CBFB-204ENST00000563939 LAS1LQ9Y4W2 734 aaKnown RBP25.18■■□□□ 1.62
CBFB-204ENST00000563939 SERPINB2P05120 415 aa25.17■■□□□ 1.62
CBFB-204ENST00000563939 CCDC184Q52MB2 194 aa25.17■■□□□ 1.62
CBFB-204ENST00000563939 NBPF26B4DH59 902 aa25.16■■□□□ 1.62
CBFB-204ENST00000563939 TBC1D9BQ66K14 1250 aa25.16■■□□□ 1.62
CBFB-204ENST00000563939 NBPF10Q6P3W6 841 aaKnown RBP25.16■■□□□ 1.62
CBFB-204ENST00000563939 NBPF15Q8N660 670 aa25.16■■□□□ 1.62
CBFB-204ENST00000563939 TRIM35Q9UPQ4 493 aa25.16■■□□□ 1.62
CBFB-204ENST00000563939 C10orf71Q711Q0 1435 aa25.15■■□□□ 1.62
CBFB-204ENST00000563939 APAF1O14727 1248 aa25.14■■□□□ 1.62
CBFB-204ENST00000563939 CAMTA2O94983 1202 aa25.14■■□□□ 1.62
CBFB-204ENST00000563939 NGEFQ8N5V2 710 aa25.14■■□□□ 1.62
CBFB-204ENST00000563939 BABAM1Q9NWV8 329 aa25.14■■□□□ 1.62
CBFB-204ENST00000563939 SETDB2Q96T68 719 aa25.13■■□□□ 1.61
CBFB-204ENST00000563939 BCS1LQ9Y276 419 aa25.13■■□□□ 1.61
CBFB-204ENST00000563939 PXDNLA1KZ92 1463 aa25.12■■□□□ 1.61
CBFB-204ENST00000563939 MRS2Q9HD23 443 aa25.11■■□□□ 1.61
CBFB-204ENST00000563939 NPHP1O15259 732 aa25.1■■□□□ 1.61
CBFB-204ENST00000563939 MYL6BP14649 208 aa25.1■■□□□ 1.61
CBFB-204ENST00000563939 EIF2S2P20042 333 aaKnown RBP25.1■■□□□ 1.61
CBFB-204ENST00000563939 CHRNA5P30532 468 aa25.1■■□□□ 1.61
CBFB-204ENST00000563939 PIM2Q9P1W9 311 aa25.1■■□□□ 1.61
CBFB-204ENST00000563939 CHL1O00533 1208 aa25.09■■□□□ 1.61
CBFB-204ENST00000563939 KCNA3P22001 575 aa25.09■■□□□ 1.61
CBFB-204ENST00000563939 ZNF652Q9Y2D9 606 aa25.09■■□□□ 1.61
CBFB-204ENST00000563939 CLEC4GQ6UXB4 293 aa25.08■■□□□ 1.61
CBFB-204ENST00000563939 GOLGB1Q14789 3259 aaKnown RBP25.07■■□□□ 1.6
CBFB-204ENST00000563939 ARHGAP27Q6ZUM4 889 aa25.06■■□□□ 1.6
CBFB-204ENST00000563939 CCDC24Q8N4L8 307 aa25.06■■□□□ 1.6
CBFB-204ENST00000563939 KDM3BQ7LBC6 1761 aa25.05■■□□□ 1.6
CBFB-204ENST00000563939 UTRNP46939 3433 aa25.05■■□□□ 1.6
CBFB-204ENST00000563939 DALRD3Q5D0E6 543 aaKnown RBP25.05■■□□□ 1.6
CBFB-204ENST00000563939 ZNF784Q8NCA9 323 aaPredicted RBP25.05■■□□□ 1.6
CBFB-204ENST00000563939 NECTIN2Q92692 538 aa25.05■■□□□ 1.6
CBFB-204ENST00000563939 CARMIL3Q8ND23 1372 aa25.05■■□□□ 1.6
CBFB-204ENST00000563939 SENP3-EIF4A1A0A087X0R7 540 aa25.04■■□□□ 1.6
CBFB-204ENST00000563939 C2CD5Q86YS7 1000 aa25.04■■□□□ 1.6
CBFB-204ENST00000563939 CFAP44Q96MT7 982 aa25.04■■□□□ 1.6
CBFB-204ENST00000563939 KIF13BQ9NQT8 1826 aa25.04■■□□□ 1.6
CBFB-204ENST00000563939 N4BP2Q86UW6 1770 aaPredicted RBP25.03■■□□□ 1.6
CBFB-204ENST00000563939 H0YIN7 160 aa25.03■■□□□ 1.6
CBFB-204ENST00000563939 CALD1Q05682 793 aaKnown RBP25.03■■□□□ 1.6
CBFB-204ENST00000563939 HLFQ16534 295 aa25.03■■□□□ 1.6
CBFB-204ENST00000563939 PRR5LQ6MZQ0 368 aa25.03■■□□□ 1.6
CBFB-204ENST00000563939 KIF6Q6ZMV9 814 aa25.03■■□□□ 1.6
CBFB-204ENST00000563939 CNBD1Q8NA66 436 aa25.03■■□□□ 1.6
CBFB-204ENST00000563939 NIP7Q9Y221 180 aaKnown RBP eCLIP25.03■■□□□ 1.6
CBFB-204ENST00000563939 KRT24Q2M2I5 525 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms