RNA–Protein interactions for RNA: ENST00000563840.1

SIRPB1-207, Transcript of signal regulatory protein beta 1, humanhuman

TSL 3

Gene SIRPB1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-207ENST00000563840 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
SIRPB1-207ENST00000563840 NLGN1Q8N2Q7 840 aa12.13□□□□□ -0.47
SIRPB1-207ENST00000563840 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
SIRPB1-207ENST00000563840 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
SIRPB1-207ENST00000563840 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
SIRPB1-207ENST00000563840 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
SIRPB1-207ENST00000563840 DLG5Q8TDM6 1919 aa12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 A1BGP04217 495 aa12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 PIP4K2AP48426 406 aaPredicted RBP12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 GPR162Q16538 588 aa12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 CCDC146Q8IYE0 955 aa12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 COL15A1P39059 1388 aa12.12□□□□□ -0.47
SIRPB1-207ENST00000563840 YY1P25490 414 aa12.11□□□□□ -0.47
SIRPB1-207ENST00000563840 TM4SF1P30408 202 aa12.11□□□□□ -0.47
SIRPB1-207ENST00000563840 TAF7Q15545 349 aaPredicted RBP12.11□□□□□ -0.47
SIRPB1-207ENST00000563840 ADAMTS8Q9UP79 889 aa12.11□□□□□ -0.47
SIRPB1-207ENST00000563840 RRP7AQ9Y3A4 280 aaKnown RBP12.11□□□□□ -0.47
SIRPB1-207ENST00000563840 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
SIRPB1-207ENST00000563840 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
SIRPB1-207ENST00000563840 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
SIRPB1-207ENST00000563840 STARD3NLO95772 234 aa12.1□□□□□ -0.47
SIRPB1-207ENST00000563840 TMPOP42166 694 aaKnown RBP12.1□□□□□ -0.47
SIRPB1-207ENST00000563840 NARFQ9UHQ1 456 aa12.1□□□□□ -0.47
SIRPB1-207ENST00000563840 C10orf71Q711Q0 1435 aa12.1□□□□□ -0.47
SIRPB1-207ENST00000563840 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
SIRPB1-207ENST00000563840 PXDNLA1KZ92 1463 aa12.09□□□□□ -0.47
SIRPB1-207ENST00000563840 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
SIRPB1-207ENST00000563840 ZPR1O75312 459 aa12.09□□□□□ -0.47
SIRPB1-207ENST00000563840 NEFMP07197 916 aa12.09□□□□□ -0.47
SIRPB1-207ENST00000563840 RIPK4P57078 832 aa12.09□□□□□ -0.47
SIRPB1-207ENST00000563840 NFIXQ14938 502 aa12.09□□□□□ -0.47
SIRPB1-207ENST00000563840 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
SIRPB1-207ENST00000563840 A0A0G2JLW4 131 aa12.08□□□□□ -0.48
SIRPB1-207ENST00000563840 NBPF26B4DH59 902 aa12.08□□□□□ -0.48
SIRPB1-207ENST00000563840 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.48
SIRPB1-207ENST00000563840 NBPF10Q6P3W6 841 aaKnown RBP12.08□□□□□ -0.48
SIRPB1-207ENST00000563840 NBPF15Q8N660 670 aa12.08□□□□□ -0.48
SIRPB1-207ENST00000563840 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
SIRPB1-207ENST00000563840 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
SIRPB1-207ENST00000563840 PARP3Q9Y6F1 533 aa12.08□□□□□ -0.48
SIRPB1-207ENST00000563840 KIF13BQ9NQT8 1826 aa12.07□□□□□ -0.48
SIRPB1-207ENST00000563840 KCNA3P22001 575 aa12.07□□□□□ -0.48
SIRPB1-207ENST00000563840 IL6STP40189 918 aaPredicted RBP12.07□□□□□ -0.48
SIRPB1-207ENST00000563840 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
SIRPB1-207ENST00000563840 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
SIRPB1-207ENST00000563840 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
SIRPB1-207ENST00000563840 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
SIRPB1-207ENST00000563840 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
SIRPB1-207ENST00000563840 CAMTA2O94983 1202 aa12.06□□□□□ -0.48
SIRPB1-207ENST00000563840 DPEP1P16444 411 aa12.06□□□□□ -0.48
SIRPB1-207ENST00000563840 WDR43Q15061 677 aaKnown RBP eCLIP12.06□□□□□ -0.48
SIRPB1-207ENST00000563840 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
SIRPB1-207ENST00000563840 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
SIRPB1-207ENST00000563840 N4BP2Q86UW6 1770 aaPredicted RBP12.05□□□□□ -0.48
SIRPB1-207ENST00000563840 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
SIRPB1-207ENST00000563840 TGFB2P61812 414 aa12.05□□□□□ -0.48
SIRPB1-207ENST00000563840 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
SIRPB1-207ENST00000563840 A0A087WZG4 1122 aa12.04□□□□□ -0.48
SIRPB1-207ENST00000563840 SERPINB2P05120 415 aa12.04□□□□□ -0.48
SIRPB1-207ENST00000563840 CHRNA5P30532 468 aa12.04□□□□□ -0.48
SIRPB1-207ENST00000563840 PNISRQ8TF01 805 aaKnown RBP12.04□□□□□ -0.48
SIRPB1-207ENST00000563840 CARMIL3Q8ND23 1372 aa12.04□□□□□ -0.48
SIRPB1-207ENST00000563840 GRIN3BO60391 1043 aa12.03□□□□□ -0.48
SIRPB1-207ENST00000563840 DZIP3Q86Y13 1208 aaKnown RBP12.03□□□□□ -0.48
SIRPB1-207ENST00000563840 CCDC24Q8N4L8 307 aa12.03□□□□□ -0.48
SIRPB1-207ENST00000563840 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
SIRPB1-207ENST00000563840 TSPYL4Q9UJ04 414 aa12.03□□□□□ -0.48
SIRPB1-207ENST00000563840 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
SIRPB1-207ENST00000563840 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
SIRPB1-207ENST00000563840 AFDNP55196 1824 aaKnown RBP12.02□□□□□ -0.48
SIRPB1-207ENST00000563840 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
SIRPB1-207ENST00000563840 APAF1O14727 1248 aa12.02□□□□□ -0.49
SIRPB1-207ENST00000563840 KRT24Q2M2I5 525 aa12.02□□□□□ -0.49
SIRPB1-207ENST00000563840 CHL1O00533 1208 aa12.01□□□□□ -0.49
SIRPB1-207ENST00000563840 HLFQ16534 295 aa12.01□□□□□ -0.49
SIRPB1-207ENST00000563840 BCS1LQ9Y276 419 aa12.01□□□□□ -0.49
SIRPB1-207ENST00000563840 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 BCORQ6W2J9 1755 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 CHD4Q14839 1912 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 PDIA6Q15084 440 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 PRR5LQ6MZQ0 368 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 TTLL7Q6ZT98 887 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 LRP10Q7Z4F1 713 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 NGEFQ8N5V2 710 aa12□□□□□ -0.49
SIRPB1-207ENST00000563840 BRCA1P38398 1863 aaKnown RBP12□□□□□ -0.49
SIRPB1-207ENST00000563840 ANXA1P04083 346 aa11.99□□□□□ -0.49
SIRPB1-207ENST00000563840 MYL6BP14649 208 aa11.99□□□□□ -0.49
SIRPB1-207ENST00000563840 PROSER3Q2NL68 480 aa11.99□□□□□ -0.49
SIRPB1-207ENST00000563840 BABAM1Q9NWV8 329 aa11.99□□□□□ -0.49
SIRPB1-207ENST00000563840 LAS1LQ9Y4W2 734 aaKnown RBP11.99□□□□□ -0.49
SIRPB1-207ENST00000563840 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
SIRPB1-207ENST00000563840 NECTIN2Q92692 538 aa11.98□□□□□ -0.49
SIRPB1-207ENST00000563840 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
SIRPB1-207ENST00000563840 ANP32CO43423 234 aa11.97□□□□□ -0.49
SIRPB1-207ENST00000563840 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
SIRPB1-207ENST00000563840 CLEC4GQ6UXB4 293 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms