RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 EIF5P55010 431 aaKnown RBP19.63■□□□□ 0.73
RPUSD1-204ENST00000563560 CCDC184Q52MB2 194 aa19.63■□□□□ 0.73
RPUSD1-204ENST00000563560 RTF1Q92541 710 aaKnown RBP19.63■□□□□ 0.73
RPUSD1-204ENST00000563560 FMNL2Q96PY5 1086 aa19.63■□□□□ 0.73
RPUSD1-204ENST00000563560 SRP68Q9UHB9 627 aaKnown RBP19.63■□□□□ 0.73
RPUSD1-204ENST00000563560 ADAMTS8Q9UP79 889 aa19.63■□□□□ 0.73
RPUSD1-204ENST00000563560 N4BP2Q86UW6 1770 aaPredicted RBP19.62■□□□□ 0.73
RPUSD1-204ENST00000563560 C10orf71Q711Q0 1435 aa19.62■□□□□ 0.73
RPUSD1-204ENST00000563560 PRAMEF22A3QJZ6 481 aa19.62■□□□□ 0.73
RPUSD1-204ENST00000563560 TAF7Q15545 349 aaPredicted RBP19.62■□□□□ 0.73
RPUSD1-204ENST00000563560 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
RPUSD1-204ENST00000563560 PNNQ9H307 717 aaKnown RBP19.62■□□□□ 0.73
RPUSD1-204ENST00000563560 BCL2L12Q9HB09 334 aa19.62■□□□□ 0.73
RPUSD1-204ENST00000563560 TMPOP42166 694 aaKnown RBP19.61■□□□□ 0.73
RPUSD1-204ENST00000563560 FKBP8Q14318 412 aa19.61■□□□□ 0.73
RPUSD1-204ENST00000563560 CD2APQ9Y5K6 639 aa19.61■□□□□ 0.73
RPUSD1-204ENST00000563560 MMP10P09238 476 aa19.6■□□□□ 0.73
RPUSD1-204ENST00000563560 RFC4P35249 363 aa19.6■□□□□ 0.73
RPUSD1-204ENST00000563560 NLGN1Q8N2Q7 840 aa19.6■□□□□ 0.73
RPUSD1-204ENST00000563560 USP16Q9Y5T5 823 aa19.6■□□□□ 0.73
RPUSD1-204ENST00000563560 MAPK8IP3Q9UPT6 1336 aa19.59■□□□□ 0.73
RPUSD1-204ENST00000563560 TM4SF1P30408 202 aa19.59■□□□□ 0.73
RPUSD1-204ENST00000563560 DDR1Q08345 913 aa19.59■□□□□ 0.73
RPUSD1-204ENST00000563560 TEX13AQ9BXU3 409 aaPredicted RBP19.59■□□□□ 0.73
RPUSD1-204ENST00000563560 MIS18AQ9NYP9 233 aa19.59■□□□□ 0.73
RPUSD1-204ENST00000563560 NARFQ9UHQ1 456 aa19.59■□□□□ 0.73
RPUSD1-204ENST00000563560 TRIM35Q9UPQ4 493 aa19.59■□□□□ 0.73
RPUSD1-204ENST00000563560 STARD3NLO95772 234 aa19.58■□□□□ 0.72
RPUSD1-204ENST00000563560 CCDC146Q8IYE0 955 aa19.58■□□□□ 0.72
RPUSD1-204ENST00000563560 RUNDC1Q96C34 613 aa19.58■□□□□ 0.72
RPUSD1-204ENST00000563560 PXDNLA1KZ92 1463 aa19.58■□□□□ 0.72
RPUSD1-204ENST00000563560 A1BGP04217 495 aa19.57■□□□□ 0.72
RPUSD1-204ENST00000563560 RIPK4P57078 832 aa19.57■□□□□ 0.72
RPUSD1-204ENST00000563560 DLEC1Q9Y238 1755 aa19.57■□□□□ 0.72
RPUSD1-204ENST00000563560 ANKRD31Q8N7Z5 1873 aa19.56■□□□□ 0.72
RPUSD1-204ENST00000563560 IL6STP40189 918 aaPredicted RBP19.56■□□□□ 0.72
RPUSD1-204ENST00000563560 EIF4A1P60842 406 aaKnown RBP19.56■□□□□ 0.72
RPUSD1-204ENST00000563560 USPL1Q5W0Q7 1092 aa19.56■□□□□ 0.72
RPUSD1-204ENST00000563560 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
RPUSD1-204ENST00000563560 NEFMP07197 916 aa19.55■□□□□ 0.72
RPUSD1-204ENST00000563560 SNRPA1P09661 255 aaKnown RBP19.55■□□□□ 0.72
RPUSD1-204ENST00000563560 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
RPUSD1-204ENST00000563560 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
RPUSD1-204ENST00000563560 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
RPUSD1-204ENST00000563560 POLRMTO00411 1230 aaKnown RBP19.54■□□□□ 0.72
RPUSD1-204ENST00000563560 YBX3P16989 372 aaKnown RBP eCLIP19.54■□□□□ 0.72
RPUSD1-204ENST00000563560 PNISRQ8TF01 805 aaKnown RBP19.54■□□□□ 0.72
RPUSD1-204ENST00000563560 RRP7AQ9Y3A4 280 aaKnown RBP19.54■□□□□ 0.72
RPUSD1-204ENST00000563560 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
RPUSD1-204ENST00000563560 WDR43Q15061 677 aaKnown RBP eCLIP19.53■□□□□ 0.72
RPUSD1-204ENST00000563560 ARFGEF1Q9Y6D6 1849 aa19.53■□□□□ 0.72
RPUSD1-204ENST00000563560 KLHL34Q8N239 644 aa19.52■□□□□ 0.72
RPUSD1-204ENST00000563560 BABAM1Q9NWV8 329 aa19.52■□□□□ 0.72
RPUSD1-204ENST00000563560 NUP98P52948 1817 aa19.52■□□□□ 0.72
RPUSD1-204ENST00000563560 CAMTA2O94983 1202 aa19.51■□□□□ 0.71
RPUSD1-204ENST00000563560 PIP4K2AP48426 406 aaPredicted RBP19.51■□□□□ 0.71
RPUSD1-204ENST00000563560 NFIXQ14938 502 aa19.51■□□□□ 0.71
RPUSD1-204ENST00000563560 COL11A2P13942 1736 aaPredicted RBP19.49■□□□□ 0.71
RPUSD1-204ENST00000563560 A0A087WZG4 1122 aa19.49■□□□□ 0.71
RPUSD1-204ENST00000563560 CHL1O00533 1208 aa19.49■□□□□ 0.71
RPUSD1-204ENST00000563560 ZPR1O75312 459 aa19.49■□□□□ 0.71
RPUSD1-204ENST00000563560 KCNA3P22001 575 aa19.49■□□□□ 0.71
RPUSD1-204ENST00000563560 LMOD3Q0VAK6 560 aa19.49■□□□□ 0.71
RPUSD1-204ENST00000563560 LRP10Q7Z4F1 713 aa19.49■□□□□ 0.71
RPUSD1-204ENST00000563560 TBC1D2BQ9UPU7 963 aa19.48■□□□□ 0.71
RPUSD1-204ENST00000563560 PARP3Q9Y6F1 533 aa19.48■□□□□ 0.71
RPUSD1-204ENST00000563560 ZNF853P0CG23 659 aa19.47■□□□□ 0.71
RPUSD1-204ENST00000563560 TGFB2P61812 414 aa19.47■□□□□ 0.71
RPUSD1-204ENST00000563560 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
RPUSD1-204ENST00000563560 APAF1O14727 1248 aa19.46■□□□□ 0.71
RPUSD1-204ENST00000563560 NEUROD2Q15784 382 aa19.46■□□□□ 0.71
RPUSD1-204ENST00000563560 TBC1D9BQ66K14 1250 aa19.46■□□□□ 0.71
RPUSD1-204ENST00000563560 RGL2O15211 777 aa19.45■□□□□ 0.7
RPUSD1-204ENST00000563560 PDIA6Q15084 440 aa19.45■□□□□ 0.7
RPUSD1-204ENST00000563560 TSPYL4Q9UJ04 414 aa19.45■□□□□ 0.7
RPUSD1-204ENST00000563560 GPR162Q16538 588 aa19.44■□□□□ 0.7
RPUSD1-204ENST00000563560 DZIP3Q86Y13 1208 aaKnown RBP19.44■□□□□ 0.7
RPUSD1-204ENST00000563560 ANKRD36CQ5JPF3 1778 aa19.43■□□□□ 0.7
RPUSD1-204ENST00000563560 DPEP1P16444 411 aa19.43■□□□□ 0.7
RPUSD1-204ENST00000563560 ARFGEF2Q9Y6D5 1785 aa19.42■□□□□ 0.7
RPUSD1-204ENST00000563560 A0A0G2JLW4 131 aa19.42■□□□□ 0.7
RPUSD1-204ENST00000563560 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
RPUSD1-204ENST00000563560 ANP32CO43423 234 aa19.42■□□□□ 0.7
RPUSD1-204ENST00000563560 SERPINB2P05120 415 aa19.42■□□□□ 0.7
RPUSD1-204ENST00000563560 KRT24Q2M2I5 525 aa19.42■□□□□ 0.7
RPUSD1-204ENST00000563560 ERBB4Q15303 1308 aa19.42■□□□□ 0.7
RPUSD1-204ENST00000563560 YY1P25490 414 aa19.41■□□□□ 0.7
RPUSD1-204ENST00000563560 CLEC4GQ6UXB4 293 aa19.41■□□□□ 0.7
RPUSD1-204ENST00000563560 CFAP44Q96MT7 982 aa19.41■□□□□ 0.7
RPUSD1-204ENST00000563560 SBF1O95248 1867 aa19.4■□□□□ 0.7
RPUSD1-204ENST00000563560 GRIN3BO60391 1043 aa19.39■□□□□ 0.69
RPUSD1-204ENST00000563560 HLFQ16534 295 aa19.39■□□□□ 0.69
RPUSD1-204ENST00000563560 PROSER3Q2NL68 480 aa19.39■□□□□ 0.69
RPUSD1-204ENST00000563560 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
RPUSD1-204ENST00000563560 PRR5LQ6MZQ0 368 aa19.39■□□□□ 0.69
RPUSD1-204ENST00000563560 MRS2Q9HD23 443 aa19.39■□□□□ 0.69
RPUSD1-204ENST00000563560 ZNF330Q9Y3S2 320 aaPredicted RBP19.39■□□□□ 0.69
RPUSD1-204ENST00000563560 TNRC6CQ9HCJ0 1690 aaKnown RBP19.39■□□□□ 0.69
RPUSD1-204ENST00000563560 ADCY9O60503 1353 aa19.38■□□□□ 0.69
RPUSD1-204ENST00000563560 CHRNA5P30532 468 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms