RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 STARD3NLO95772 234 aa37.35■■■■□ 3.57
NME3-203ENST00000563367 GYS1P13807 737 aa37.35■■■■□ 3.57
NME3-203ENST00000563367 SRP68Q9UHB9 627 aaKnown RBP37.35■■■■□ 3.57
NME3-203ENST00000563367 CCDC184Q52MB2 194 aa37.34■■■■□ 3.57
NME3-203ENST00000563367 RUNDC1Q96C34 613 aa37.34■■■■□ 3.57
NME3-203ENST00000563367 TEX13AQ9BXU3 409 aaPredicted RBP37.34■■■■□ 3.57
NME3-203ENST00000563367 RRP7AQ9Y3A4 280 aaKnown RBP37.33■■■■□ 3.57
NME3-203ENST00000563367 USP42Q9H9J4 1324 aaKnown RBP37.32■■■■□ 3.56
NME3-203ENST00000563367 CANXP27824 592 aaKnown RBP37.31■■■■□ 3.56
NME3-203ENST00000563367 NLGN1Q8N2Q7 840 aa37.31■■■■□ 3.56
NME3-203ENST00000563367 NLGN2Q8NFZ4 835 aa37.31■■■■□ 3.56
NME3-203ENST00000563367 PRAMEF22A3QJZ6 481 aa37.3■■■■□ 3.56
NME3-203ENST00000563367 MMP10P09238 476 aa37.3■■■■□ 3.56
NME3-203ENST00000563367 COL15A1P39059 1388 aa37.29■■■■□ 3.56
NME3-203ENST00000563367 USP16Q9Y5T5 823 aa37.28■■■■□ 3.56
NME3-203ENST00000563367 NEUROD2Q15784 382 aa37.27■■■■□ 3.56
NME3-203ENST00000563367 ANP32CO43423 234 aa37.26■■■■□ 3.56
NME3-203ENST00000563367 A1BGP04217 495 aa37.26■■■■□ 3.56
NME3-203ENST00000563367 PNISRQ8TF01 805 aaKnown RBP37.26■■■■□ 3.56
NME3-203ENST00000563367 SNRPA1P09661 255 aaKnown RBP37.25■■■■□ 3.55
NME3-203ENST00000563367 EIF5P55010 431 aaKnown RBP37.25■■■■□ 3.55
NME3-203ENST00000563367 FKBP8Q14318 412 aa37.25■■■■□ 3.55
NME3-203ENST00000563367 CD2APQ9Y5K6 639 aa37.25■■■■□ 3.55
NME3-203ENST00000563367 USPL1Q5W0Q7 1092 aa37.24■■■■□ 3.55
NME3-203ENST00000563367 DCAF8L1A6NGE4 600 aa37.23■■■■□ 3.55
NME3-203ENST00000563367 ZPR1O75312 459 aa37.23■■■■□ 3.55
NME3-203ENST00000563367 NARFQ9UHQ1 456 aa37.23■■■■□ 3.55
NME3-203ENST00000563367 LMOD3Q0VAK6 560 aa37.22■■■■□ 3.55
NME3-203ENST00000563367 TRIM35Q9UPQ4 493 aa37.22■■■■□ 3.55
NME3-203ENST00000563367 KIF13BQ9NQT8 1826 aa37.21■■■■□ 3.55
NME3-203ENST00000563367 LAMB4A4D0S4 1761 aa37.2■■■■□ 3.55
NME3-203ENST00000563367 EIF4A1P60842 406 aaKnown RBP37.19■■■■□ 3.54
NME3-203ENST00000563367 IL6STP40189 918 aaPredicted RBP37.18■■■■□ 3.54
NME3-203ENST00000563367 PIP4K2AP48426 406 aaPredicted RBP37.18■■■■□ 3.54
NME3-203ENST00000563367 BCL2L12Q9HB09 334 aa37.18■■■■□ 3.54
NME3-203ENST00000563367 ZNF330Q9Y3S2 320 aaPredicted RBP37.17■■■■□ 3.54
NME3-203ENST00000563367 PARP3Q9Y6F1 533 aa37.16■■■■□ 3.54
NME3-203ENST00000563367 A0A087WZG4 1122 aa37.15■■■■□ 3.54
NME3-203ENST00000563367 TM4SF1P30408 202 aa37.15■■■■□ 3.54
NME3-203ENST00000563367 DDR1Q08345 913 aa37.15■■■■□ 3.54
NME3-203ENST00000563367 TSPYL4Q9UJ04 414 aa37.15■■■■□ 3.54
NME3-203ENST00000563367 APAF1O14727 1248 aa37.14■■■■□ 3.54
NME3-203ENST00000563367 GIGYF1O75420 1035 aaPredicted RBP37.14■■■■□ 3.54
NME3-203ENST00000563367 SCN7AQ01118 1682 aa37.13■■■■□ 3.53
NME3-203ENST00000563367 TBC1D2BQ9UPU7 963 aa37.13■■■■□ 3.53
NME3-203ENST00000563367 MRS2Q9HD23 443 aa37.12■■■■□ 3.53
NME3-203ENST00000563367 KIAA1551Q9HCM1 1747 aa37.12■■■■□ 3.53
NME3-203ENST00000563367 AFDNP55196 1824 aaKnown RBP37.12■■■■□ 3.53
NME3-203ENST00000563367 GOLGB1Q14789 3259 aaKnown RBP37.11■■■■□ 3.53
NME3-203ENST00000563367 NBPF26B4DH59 902 aa37.11■■■■□ 3.53
NME3-203ENST00000563367 GPR162Q16538 588 aa37.11■■■■□ 3.53
NME3-203ENST00000563367 NBPF10Q6P3W6 841 aaKnown RBP37.11■■■■□ 3.53
NME3-203ENST00000563367 NBPF15Q8N660 670 aa37.11■■■■□ 3.53
NME3-203ENST00000563367 UTRNP46939 3433 aa37.11■■■■□ 3.53
NME3-203ENST00000563367 C10orf71Q711Q0 1435 aa37.1■■■■□ 3.53
NME3-203ENST00000563367 N4BP2Q86UW6 1770 aaPredicted RBP37.1■■■■□ 3.53
NME3-203ENST00000563367 PELP1Q8IZL8 1130 aaKnown RBP37.1■■■■□ 3.53
NME3-203ENST00000563367 BABAM1Q9NWV8 329 aa37.1■■■■□ 3.53
NME3-203ENST00000563367 POLRMTO00411 1230 aaKnown RBP37.09■■■■□ 3.53
NME3-203ENST00000563367 NFIXQ14938 502 aa37.09■■■■□ 3.53
NME3-203ENST00000563367 BCORQ6W2J9 1755 aa37.09■■■■□ 3.53
NME3-203ENST00000563367 CHD4Q14839 1912 aa37.06■■■■□ 3.52
NME3-203ENST00000563367 YBX3P16989 372 aaKnown RBP eCLIP37.06■■■■□ 3.52
NME3-203ENST00000563367 CHL1O00533 1208 aa37.05■■■■□ 3.52
NME3-203ENST00000563367 NPM2Q86SE8 214 aaKnown RBP37.05■■■■□ 3.52
NME3-203ENST00000563367 NRXN2Q9P2S2 1712 aa37.05■■■■□ 3.52
NME3-203ENST00000563367 CAMTA2O94983 1202 aa37.04■■■■□ 3.52
NME3-203ENST00000563367 DZIP3Q86Y13 1208 aaKnown RBP37.04■■■■□ 3.52
NME3-203ENST00000563367 LAS1LQ9Y4W2 734 aaKnown RBP37.04■■■■□ 3.52
NME3-203ENST00000563367 PXDNLA1KZ92 1463 aa37.03■■■■□ 3.52
NME3-203ENST00000563367 TBC1D9BQ66K14 1250 aa37.01■■■■□ 3.52
NME3-203ENST00000563367 BICDL1Q6ZP65 573 aa37.01■■■■□ 3.52
NME3-203ENST00000563367 WWC3Q9ULE0 1092 aa37.01■■■■□ 3.52
NME3-203ENST00000563367 TGFB2P61812 414 aa37■■■■□ 3.51
NME3-203ENST00000563367 SENP3-EIF4A1A0A087X0R7 540 aa36.98■■■■□ 3.51
NME3-203ENST00000563367 A0A0G2JLW4 131 aa36.98■■■■□ 3.51
NME3-203ENST00000563367 BRCA1P38398 1863 aaKnown RBP36.98■■■■□ 3.51
NME3-203ENST00000563367 SERPINB2P05120 415 aa36.97■■■■□ 3.51
NME3-203ENST00000563367 KRT24Q2M2I5 525 aa36.97■■■■□ 3.51
NME3-203ENST00000563367 CFAP44Q96MT7 982 aa36.96■■■■□ 3.51
NME3-203ENST00000563367 DPEP1P16444 411 aa36.95■■■■□ 3.51
NME3-203ENST00000563367 YY1P25490 414 aa36.94■■■■□ 3.5
NME3-203ENST00000563367 NGEFQ8N5V2 710 aa36.94■■■■□ 3.5
NME3-203ENST00000563367 ZNF853P0CG23 659 aa36.93■■■■□ 3.5
NME3-203ENST00000563367 MYL6BP14649 208 aa36.93■■■■□ 3.5
NME3-203ENST00000563367 EIF2S2P20042 333 aaKnown RBP36.93■■■■□ 3.5
NME3-203ENST00000563367 GRIN3BO60391 1043 aa36.91■■■■□ 3.5
NME3-203ENST00000563367 MBIPQ9NS73 344 aa36.91■■■■□ 3.5
NME3-203ENST00000563367 NUP98P52948 1817 aa36.91■■■■□ 3.5
NME3-203ENST00000563367 KCNA3P22001 575 aa36.9■■■■□ 3.5
NME3-203ENST00000563367 CLEC4GQ6UXB4 293 aa36.9■■■■□ 3.5
NME3-203ENST00000563367 ERBB4Q15303 1308 aa36.89■■■■□ 3.5
NME3-203ENST00000563367 PDIA6Q15084 440 aa36.89■■■■□ 3.5
NME3-203ENST00000563367 ANKRD31Q8N7Z5 1873 aa36.89■■■■□ 3.5
NME3-203ENST00000563367 SETDB2Q96T68 719 aa36.89■■■■□ 3.5
NME3-203ENST00000563367 CARMIL3Q8ND23 1372 aa36.89■■■■□ 3.5
NME3-203ENST00000563367 IFT57Q9NWB7 429 aa36.88■■■■□ 3.49
NME3-203ENST00000563367 CALD1Q05682 793 aaKnown RBP36.87■■■■□ 3.49
NME3-203ENST00000563367 HLFQ16534 295 aa36.87■■■■□ 3.49
NME3-203ENST00000563367 TTLL7Q6ZT98 887 aa36.87■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms