RNA–Protein interactions for RNA: ENST00000563127.1

KATNB1-204, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-204ENST00000563127 NEUROD2Q15784 382 aa25.63■■□□□ 1.69
KATNB1-204ENST00000563127 CCDC184Q52MB2 194 aa25.63■■□□□ 1.69
KATNB1-204ENST00000563127 RRP7AQ9Y3A4 280 aaKnown RBP25.63■■□□□ 1.69
KATNB1-204ENST00000563127 ZBTB1Q9Y2K1 713 aa25.62■■□□□ 1.69
KATNB1-204ENST00000563127 CANXP27824 592 aaKnown RBP25.61■■□□□ 1.69
KATNB1-204ENST00000563127 NLGN1Q8N2Q7 840 aa25.61■■□□□ 1.69
KATNB1-204ENST00000563127 GYS1P13807 737 aa25.6■■□□□ 1.69
KATNB1-204ENST00000563127 PNISRQ8TF01 805 aaKnown RBP25.6■■□□□ 1.69
KATNB1-204ENST00000563127 SRP68Q9UHB9 627 aaKnown RBP25.6■■□□□ 1.69
KATNB1-204ENST00000563127 SOS1Q07889 1333 aaPredicted RBP25.6■■□□□ 1.69
KATNB1-204ENST00000563127 DCAF8L1A6NGE4 600 aa25.59■■□□□ 1.69
KATNB1-204ENST00000563127 SNRPA1P09661 255 aaKnown RBP25.58■■□□□ 1.69
KATNB1-204ENST00000563127 LMOD3Q0VAK6 560 aa25.58■■□□□ 1.69
KATNB1-204ENST00000563127 USP16Q9Y5T5 823 aa25.58■■□□□ 1.69
KATNB1-204ENST00000563127 A1BGP04217 495 aa25.57■■□□□ 1.68
KATNB1-204ENST00000563127 MMP10P09238 476 aa25.57■■□□□ 1.68
KATNB1-204ENST00000563127 PRAMEF22A3QJZ6 481 aa25.56■■□□□ 1.68
KATNB1-204ENST00000563127 ZPR1O75312 459 aa25.56■■□□□ 1.68
KATNB1-204ENST00000563127 C4AP0C0L4 1744 aa25.56■■□□□ 1.68
KATNB1-204ENST00000563127 USP42Q9H9J4 1324 aaKnown RBP25.56■■□□□ 1.68
KATNB1-204ENST00000563127 EIF5P55010 431 aaKnown RBP25.54■■□□□ 1.68
KATNB1-204ENST00000563127 NLGN2Q8NFZ4 835 aa25.54■■□□□ 1.68
KATNB1-204ENST00000563127 FKBP8Q14318 412 aa25.53■■□□□ 1.68
KATNB1-204ENST00000563127 USPL1Q5W0Q7 1092 aa25.53■■□□□ 1.68
KATNB1-204ENST00000563127 MRS2Q9HD23 443 aa25.53■■□□□ 1.68
KATNB1-204ENST00000563127 NARFQ9UHQ1 456 aa25.53■■□□□ 1.68
KATNB1-204ENST00000563127 TRIM35Q9UPQ4 493 aa25.53■■□□□ 1.68
KATNB1-204ENST00000563127 ZNF330Q9Y3S2 320 aaPredicted RBP25.53■■□□□ 1.68
KATNB1-204ENST00000563127 CD2APQ9Y5K6 639 aa25.53■■□□□ 1.68
KATNB1-204ENST00000563127 COL15A1P39059 1388 aa25.53■■□□□ 1.68
KATNB1-204ENST00000563127 APAF1O14727 1248 aa25.52■■□□□ 1.68
KATNB1-204ENST00000563127 EIF4A1P60842 406 aaKnown RBP25.52■■□□□ 1.68
KATNB1-204ENST00000563127 IL6STP40189 918 aaPredicted RBP25.51■■□□□ 1.67
KATNB1-204ENST00000563127 TSPYL4Q9UJ04 414 aa25.51■■□□□ 1.67
KATNB1-204ENST00000563127 A0A087WZG4 1122 aa25.5■■□□□ 1.67
KATNB1-204ENST00000563127 KDM3BQ7LBC6 1761 aa25.5■■□□□ 1.67
KATNB1-204ENST00000563127 NPM2Q86SE8 214 aaKnown RBP25.5■■□□□ 1.67
KATNB1-204ENST00000563127 PARP3Q9Y6F1 533 aa25.5■■□□□ 1.67
KATNB1-204ENST00000563127 PIP4K2AP48426 406 aaPredicted RBP25.49■■□□□ 1.67
KATNB1-204ENST00000563127 GIGYF1O75420 1035 aaPredicted RBP25.48■■□□□ 1.67
KATNB1-204ENST00000563127 BABAM1Q9NWV8 329 aa25.48■■□□□ 1.67
KATNB1-204ENST00000563127 TBC1D2BQ9UPU7 963 aa25.48■■□□□ 1.67
KATNB1-204ENST00000563127 TM4SF1P30408 202 aa25.46■■□□□ 1.67
KATNB1-204ENST00000563127 GPR162Q16538 588 aa25.46■■□□□ 1.67
KATNB1-204ENST00000563127 BCL2L12Q9HB09 334 aa25.46■■□□□ 1.67
KATNB1-204ENST00000563127 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
KATNB1-204ENST00000563127 PELP1Q8IZL8 1130 aaKnown RBP25.45■■□□□ 1.66
KATNB1-204ENST00000563127 NBPF26B4DH59 902 aa25.44■■□□□ 1.66
KATNB1-204ENST00000563127 CHL1O00533 1208 aa25.44■■□□□ 1.66
KATNB1-204ENST00000563127 DDR1Q08345 913 aa25.44■■□□□ 1.66
KATNB1-204ENST00000563127 NBPF10Q6P3W6 841 aaKnown RBP25.44■■□□□ 1.66
KATNB1-204ENST00000563127 NBPF15Q8N660 670 aa25.44■■□□□ 1.66
KATNB1-204ENST00000563127 NFIXQ14938 502 aa25.43■■□□□ 1.66
KATNB1-204ENST00000563127 DZIP3Q86Y13 1208 aaKnown RBP25.42■■□□□ 1.66
KATNB1-204ENST00000563127 POLRMTO00411 1230 aaKnown RBP25.41■■□□□ 1.66
KATNB1-204ENST00000563127 SENP3-EIF4A1A0A087X0R7 540 aa25.4■■□□□ 1.66
KATNB1-204ENST00000563127 BICDL1Q6ZP65 573 aa25.4■■□□□ 1.66
KATNB1-204ENST00000563127 CAMTA2O94983 1202 aa25.39■■□□□ 1.66
KATNB1-204ENST00000563127 TBC1D9BQ66K14 1250 aa25.38■■□□□ 1.65
KATNB1-204ENST00000563127 CFAP44Q96MT7 982 aa25.38■■□□□ 1.65
KATNB1-204ENST00000563127 LAMB4A4D0S4 1761 aa25.38■■□□□ 1.65
KATNB1-204ENST00000563127 SERPINB2P05120 415 aa25.37■■□□□ 1.65
KATNB1-204ENST00000563127 EIF2S2P20042 333 aaKnown RBP25.37■■□□□ 1.65
KATNB1-204ENST00000563127 TGFB2P61812 414 aa25.37■■□□□ 1.65
KATNB1-204ENST00000563127 NGEFQ8N5V2 710 aa25.37■■□□□ 1.65
KATNB1-204ENST00000563127 KIF13BQ9NQT8 1826 aa25.36■■□□□ 1.65
KATNB1-204ENST00000563127 A0A0G2JLW4 131 aa25.36■■□□□ 1.65
KATNB1-204ENST00000563127 YBX3P16989 372 aaKnown RBP eCLIP25.36■■□□□ 1.65
KATNB1-204ENST00000563127 CALD1Q05682 793 aaKnown RBP25.36■■□□□ 1.65
KATNB1-204ENST00000563127 WWC3Q9ULE0 1092 aa25.36■■□□□ 1.65
KATNB1-204ENST00000563127 C10orf71Q711Q0 1435 aa25.36■■□□□ 1.65
KATNB1-204ENST00000563127 MYL6BP14649 208 aa25.35■■□□□ 1.65
KATNB1-204ENST00000563127 KRT24Q2M2I5 525 aa25.35■■□□□ 1.65
KATNB1-204ENST00000563127 FAM9BQ8IZU0 186 aa25.35■■□□□ 1.65
KATNB1-204ENST00000563127 AFDNP55196 1824 aaKnown RBP25.34■■□□□ 1.65
KATNB1-204ENST00000563127 ZNF853P0CG23 659 aa25.33■■□□□ 1.65
KATNB1-204ENST00000563127 DPEP1P16444 411 aa25.33■■□□□ 1.65
KATNB1-204ENST00000563127 GNAI1P63096 354 aa25.33■■□□□ 1.65
KATNB1-204ENST00000563127 MBIPQ9NS73 344 aa25.33■■□□□ 1.65
KATNB1-204ENST00000563127 N4BP2Q86UW6 1770 aaPredicted RBP25.33■■□□□ 1.65
KATNB1-204ENST00000563127 CLEC4GQ6UXB4 293 aa25.32■■□□□ 1.64
KATNB1-204ENST00000563127 NECTIN2Q92692 538 aa25.32■■□□□ 1.64
KATNB1-204ENST00000563127 SETDB2Q96T68 719 aa25.32■■□□□ 1.64
KATNB1-204ENST00000563127 IFT57Q9NWB7 429 aa25.32■■□□□ 1.64
KATNB1-204ENST00000563127 GRIN3BO60391 1043 aa25.31■■□□□ 1.64
KATNB1-204ENST00000563127 ZNF652Q9Y2D9 606 aa25.31■■□□□ 1.64
KATNB1-204ENST00000563127 PXDNLA1KZ92 1463 aa25.31■■□□□ 1.64
KATNB1-204ENST00000563127 SCN7AQ01118 1682 aa25.31■■□□□ 1.64
KATNB1-204ENST00000563127 ERBB4Q15303 1308 aa25.31■■□□□ 1.64
KATNB1-204ENST00000563127 YY1P25490 414 aa25.3■■□□□ 1.64
KATNB1-204ENST00000563127 CCDC27Q2M243 656 aa25.3■■□□□ 1.64
KATNB1-204ENST00000563127 CHD4Q14839 1912 aa25.29■■□□□ 1.64
KATNB1-204ENST00000563127 PDIA6Q15084 440 aa25.29■■□□□ 1.64
KATNB1-204ENST00000563127 TTLL7Q6ZT98 887 aa25.29■■□□□ 1.64
KATNB1-204ENST00000563127 WWC1Q8IX03 1113 aa25.29■■□□□ 1.64
KATNB1-204ENST00000563127 BCORQ6W2J9 1755 aa25.28■■□□□ 1.64
KATNB1-204ENST00000563127 KCNA3P22001 575 aa25.28■■□□□ 1.64
KATNB1-204ENST00000563127 HLFQ16534 295 aa25.28■■□□□ 1.64
KATNB1-204ENST00000563127 SALL2Q9Y467 1007 aaPredicted RBP25.28■■□□□ 1.64
KATNB1-204ENST00000563127 KIAA1551Q9HCM1 1747 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms