RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
TMEM87A-205ENST00000562946 ZNF790Q6PG37 636 aa11.66□□□□□ -0.54
TMEM87A-205ENST00000562946 MCM10Q7L590 875 aa11.66□□□□□ -0.54
TMEM87A-205ENST00000562946 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
TMEM87A-205ENST00000562946 ARHGEF1Q92888 912 aaKnown RBP11.66□□□□□ -0.54
TMEM87A-205ENST00000562946 CYP19A1P11511 503 aaPredicted RBP11.65□□□□□ -0.54
TMEM87A-205ENST00000562946 DCTN1Q14203 1278 aa11.65□□□□□ -0.54
TMEM87A-205ENST00000562946 TRAPPC3LQ5T215 181 aa11.65□□□□□ -0.54
TMEM87A-205ENST00000562946 INTS5Q6P9B9 1019 aaKnown RBP11.65□□□□□ -0.54
TMEM87A-205ENST00000562946 RTF1Q92541 710 aaKnown RBP11.65□□□□□ -0.54
TMEM87A-205ENST00000562946 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
TMEM87A-205ENST00000562946 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.54
TMEM87A-205ENST00000562946 KCNQ3O43525 872 aa11.64□□□□□ -0.55
TMEM87A-205ENST00000562946 NEFMP07197 916 aa11.64□□□□□ -0.55
TMEM87A-205ENST00000562946 TTC5Q8N0Z6 440 aa11.64□□□□□ -0.55
TMEM87A-205ENST00000562946 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
TMEM87A-205ENST00000562946 BTBD11A6QL63 1104 aa11.63□□□□□ -0.55
TMEM87A-205ENST00000562946 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
TMEM87A-205ENST00000562946 CCDC87Q9NVE4 849 aa11.63□□□□□ -0.55
TMEM87A-205ENST00000562946 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
TMEM87A-205ENST00000562946 CHD4Q14839 1912 aa11.62□□□□□ -0.55
TMEM87A-205ENST00000562946 SOS1Q07889 1333 aaPredicted RBP11.61□□□□□ -0.55
TMEM87A-205ENST00000562946 MAPK8IP3Q9UPT6 1336 aa11.61□□□□□ -0.55
TMEM87A-205ENST00000562946 KIF13BQ9NQT8 1826 aa11.61□□□□□ -0.55
TMEM87A-205ENST00000562946 GYS1P13807 737 aa11.61□□□□□ -0.55
TMEM87A-205ENST00000562946 RFC4P35249 363 aa11.61□□□□□ -0.55
TMEM87A-205ENST00000562946 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
TMEM87A-205ENST00000562946 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
TMEM87A-205ENST00000562946 ZBTB1Q9Y2K1 713 aa11.61□□□□□ -0.55
TMEM87A-205ENST00000562946 TAF7Q15545 349 aaPredicted RBP11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 NLGN1Q8N2Q7 840 aa11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 TEX13AQ9BXU3 409 aaPredicted RBP11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 STARD3NLO95772 234 aa11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 MMP10P09238 476 aa11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 TMPOP42166 694 aaKnown RBP11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 NLGN2Q8NFZ4 835 aa11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 SRP68Q9UHB9 627 aaKnown RBP11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 CD2APQ9Y5K6 639 aa11.6□□□□□ -0.55
TMEM87A-205ENST00000562946 EIF5P55010 431 aaKnown RBP11.59□□□□□ -0.55
TMEM87A-205ENST00000562946 RIPK4P57078 832 aa11.59□□□□□ -0.55
TMEM87A-205ENST00000562946 WDR43Q15061 677 aaKnown RBP eCLIP11.59□□□□□ -0.55
TMEM87A-205ENST00000562946 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
TMEM87A-205ENST00000562946 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
TMEM87A-205ENST00000562946 MIS18AQ9NYP9 233 aa11.59□□□□□ -0.55
TMEM87A-205ENST00000562946 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
TMEM87A-205ENST00000562946 AFDNP55196 1824 aaKnown RBP11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 COL15A1P39059 1388 aa11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 KIAA1551Q9HCM1 1747 aa11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 A1BGP04217 495 aa11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 CCDC184Q52MB2 194 aa11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 RUNDC1Q96C34 613 aa11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 SSUH2Q9Y2M2 353 aa11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 N4BP2Q86UW6 1770 aaPredicted RBP11.58□□□□□ -0.56
TMEM87A-205ENST00000562946 UTRNP46939 3433 aa11.57□□□□□ -0.56
TMEM87A-205ENST00000562946 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
TMEM87A-205ENST00000562946 SNRPA1P09661 255 aaKnown RBP11.57□□□□□ -0.56
TMEM87A-205ENST00000562946 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
TMEM87A-205ENST00000562946 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
TMEM87A-205ENST00000562946 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
TMEM87A-205ENST00000562946 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
TMEM87A-205ENST00000562946 ZPR1O75312 459 aa11.56□□□□□ -0.56
TMEM87A-205ENST00000562946 TM4SF1P30408 202 aa11.56□□□□□ -0.56
TMEM87A-205ENST00000562946 BRCA1P38398 1863 aaKnown RBP11.56□□□□□ -0.56
TMEM87A-205ENST00000562946 USPL1Q5W0Q7 1092 aa11.56□□□□□ -0.56
TMEM87A-205ENST00000562946 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
TMEM87A-205ENST00000562946 RRP7AQ9Y3A4 280 aaKnown RBP11.56□□□□□ -0.56
TMEM87A-205ENST00000562946 GOLGB1Q14789 3259 aaKnown RBP11.56□□□□□ -0.56
TMEM87A-205ENST00000562946 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
TMEM87A-205ENST00000562946 EIF4A1P60842 406 aaKnown RBP11.55□□□□□ -0.56
TMEM87A-205ENST00000562946 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
TMEM87A-205ENST00000562946 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
TMEM87A-205ENST00000562946 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
TMEM87A-205ENST00000562946 BCORQ6W2J9 1755 aa11.55□□□□□ -0.56
TMEM87A-205ENST00000562946 NRXN2Q9P2S2 1712 aa11.55□□□□□ -0.56
TMEM87A-205ENST00000562946 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
TMEM87A-205ENST00000562946 DDR1Q08345 913 aa11.54□□□□□ -0.56
TMEM87A-205ENST00000562946 LMOD3Q0VAK6 560 aa11.54□□□□□ -0.56
TMEM87A-205ENST00000562946 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
TMEM87A-205ENST00000562946 C10orf71Q711Q0 1435 aa11.54□□□□□ -0.56
TMEM87A-205ENST00000562946 A0A087WZG4 1122 aa11.53□□□□□ -0.56
TMEM87A-205ENST00000562946 POLRMTO00411 1230 aaKnown RBP11.53□□□□□ -0.56
TMEM87A-205ENST00000562946 ANP32CO43423 234 aa11.53□□□□□ -0.56
TMEM87A-205ENST00000562946 PIP4K2AP48426 406 aaPredicted RBP11.53□□□□□ -0.56
TMEM87A-205ENST00000562946 NFIXQ14938 502 aa11.53□□□□□ -0.56
TMEM87A-205ENST00000562946 GPR162Q16538 588 aa11.53□□□□□ -0.56
TMEM87A-205ENST00000562946 TBC1D2BQ9UPU7 963 aa11.53□□□□□ -0.56
TMEM87A-205ENST00000562946 NBPF26B4DH59 902 aa11.52□□□□□ -0.56
TMEM87A-205ENST00000562946 YBX3P16989 372 aaKnown RBP eCLIP11.52□□□□□ -0.56
TMEM87A-205ENST00000562946 NBPF10Q6P3W6 841 aaKnown RBP11.52□□□□□ -0.56
TMEM87A-205ENST00000562946 NBPF15Q8N660 670 aa11.52□□□□□ -0.56
TMEM87A-205ENST00000562946 BABAM1Q9NWV8 329 aa11.52□□□□□ -0.56
TMEM87A-205ENST00000562946 NUP98P52948 1817 aa11.52□□□□□ -0.57
TMEM87A-205ENST00000562946 PXDNLA1KZ92 1463 aa11.52□□□□□ -0.57
TMEM87A-205ENST00000562946 APAF1O14727 1248 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms