RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
CYLD-204ENST00000562884 INTS5Q6P9B9 1019 aaKnown RBP11.7□□□□□ -0.54
CYLD-204ENST00000562884 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
CYLD-204ENST00000562884 AMIGO3Q86WK7 504 aa11.7□□□□□ -0.54
CYLD-204ENST00000562884 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
CYLD-204ENST00000562884 SNRPA1P09661 255 aaKnown RBP11.69□□□□□ -0.54
CYLD-204ENST00000562884 TMPOP42166 694 aaKnown RBP11.69□□□□□ -0.54
CYLD-204ENST00000562884 DCTN1Q14203 1278 aa11.69□□□□□ -0.54
CYLD-204ENST00000562884 BABAM1Q9NWV8 329 aa11.69□□□□□ -0.54
CYLD-204ENST00000562884 CD2APQ9Y5K6 639 aa11.69□□□□□ -0.54
CYLD-204ENST00000562884 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
CYLD-204ENST00000562884 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
CYLD-204ENST00000562884 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
CYLD-204ENST00000562884 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
CYLD-204ENST00000562884 CHD4Q14839 1912 aa11.68□□□□□ -0.54
CYLD-204ENST00000562884 GYS1P13807 737 aa11.67□□□□□ -0.54
CYLD-204ENST00000562884 SMIM5Q71RC9 77 aa11.67□□□□□ -0.54
CYLD-204ENST00000562884 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
CYLD-204ENST00000562884 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
CYLD-204ENST00000562884 COL15A1P39059 1388 aa11.67□□□□□ -0.54
CYLD-204ENST00000562884 USP42Q9H9J4 1324 aaKnown RBP11.66□□□□□ -0.54
CYLD-204ENST00000562884 MMP10P09238 476 aa11.66□□□□□ -0.54
CYLD-204ENST00000562884 CANXP27824 592 aaKnown RBP11.66□□□□□ -0.54
CYLD-204ENST00000562884 IL6STP40189 918 aaPredicted RBP11.66□□□□□ -0.54
CYLD-204ENST00000562884 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
CYLD-204ENST00000562884 ZBTB1Q9Y2K1 713 aa11.66□□□□□ -0.54
CYLD-204ENST00000562884 KCNQ3O43525 872 aa11.65□□□□□ -0.54
CYLD-204ENST00000562884 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
CYLD-204ENST00000562884 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
CYLD-204ENST00000562884 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.55
CYLD-204ENST00000562884 CALD1Q05682 793 aaKnown RBP11.64□□□□□ -0.55
CYLD-204ENST00000562884 NEUROD2Q15784 382 aa11.64□□□□□ -0.55
CYLD-204ENST00000562884 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
CYLD-204ENST00000562884 TGFB2P61812 414 aa11.63□□□□□ -0.55
CYLD-204ENST00000562884 GPR162Q16538 588 aa11.63□□□□□ -0.55
CYLD-204ENST00000562884 USPL1Q5W0Q7 1092 aa11.63□□□□□ -0.55
CYLD-204ENST00000562884 MIS18AQ9NYP9 233 aa11.63□□□□□ -0.55
CYLD-204ENST00000562884 SRP68Q9UHB9 627 aaKnown RBP11.63□□□□□ -0.55
CYLD-204ENST00000562884 TSPYL4Q9UJ04 414 aa11.63□□□□□ -0.55
CYLD-204ENST00000562884 USP16Q9Y5T5 823 aa11.63□□□□□ -0.55
CYLD-204ENST00000562884 RGL2O15211 777 aa11.62□□□□□ -0.55
CYLD-204ENST00000562884 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
CYLD-204ENST00000562884 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
CYLD-204ENST00000562884 A1BGP04217 495 aa11.62□□□□□ -0.55
CYLD-204ENST00000562884 TM4SF1P30408 202 aa11.62□□□□□ -0.55
CYLD-204ENST00000562884 EIF4A1P60842 406 aaKnown RBP11.62□□□□□ -0.55
CYLD-204ENST00000562884 FKBP8Q14318 412 aa11.62□□□□□ -0.55
CYLD-204ENST00000562884 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
CYLD-204ENST00000562884 MRS2Q9HD23 443 aa11.62□□□□□ -0.55
CYLD-204ENST00000562884 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
CYLD-204ENST00000562884 NLGN2Q8NFZ4 835 aa11.61□□□□□ -0.55
CYLD-204ENST00000562884 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
CYLD-204ENST00000562884 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
CYLD-204ENST00000562884 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
CYLD-204ENST00000562884 AFDNP55196 1824 aaKnown RBP11.6□□□□□ -0.55
CYLD-204ENST00000562884 CHL1O00533 1208 aa11.6□□□□□ -0.55
CYLD-204ENST00000562884 APAF1O14727 1248 aa11.6□□□□□ -0.55
CYLD-204ENST00000562884 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
CYLD-204ENST00000562884 CLEC4GQ6UXB4 293 aa11.6□□□□□ -0.55
CYLD-204ENST00000562884 DZIP3Q86Y13 1208 aaKnown RBP11.6□□□□□ -0.55
CYLD-204ENST00000562884 ZNF652Q9Y2D9 606 aa11.6□□□□□ -0.55
CYLD-204ENST00000562884 SCN7AQ01118 1682 aa11.59□□□□□ -0.55
CYLD-204ENST00000562884 POLRMTO00411 1230 aaKnown RBP11.59□□□□□ -0.55
CYLD-204ENST00000562884 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
CYLD-204ENST00000562884 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
CYLD-204ENST00000562884 CHMP4AQ9BY43 222 aa11.59□□□□□ -0.55
CYLD-204ENST00000562884 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
CYLD-204ENST00000562884 C10orf71Q711Q0 1435 aa11.59□□□□□ -0.55
CYLD-204ENST00000562884 BCORQ6W2J9 1755 aa11.59□□□□□ -0.55
CYLD-204ENST00000562884 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.56
CYLD-204ENST00000562884 GNAI1P63096 354 aa11.58□□□□□ -0.56
CYLD-204ENST00000562884 NFIXQ14938 502 aa11.58□□□□□ -0.56
CYLD-204ENST00000562884 SETDB2Q96T68 719 aa11.58□□□□□ -0.56
CYLD-204ENST00000562884 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
CYLD-204ENST00000562884 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
CYLD-204ENST00000562884 LAS1LQ9Y4W2 734 aaKnown RBP11.58□□□□□ -0.56
CYLD-204ENST00000562884 N4BP2Q86UW6 1770 aaPredicted RBP11.58□□□□□ -0.56
CYLD-204ENST00000562884 NRXN2Q9P2S2 1712 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 NBPF26B4DH59 902 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 SERPINB2P05120 415 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 HOXB7P09629 217 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 YY1P25490 414 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 DDR1Q08345 913 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 CCDC27Q2M243 656 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 NBPF10Q6P3W6 841 aaKnown RBP11.57□□□□□ -0.56
CYLD-204ENST00000562884 NGEFQ8N5V2 710 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 NBPF15Q8N660 670 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 NUP98P52948 1817 aa11.57□□□□□ -0.56
CYLD-204ENST00000562884 CARMIL3Q8ND23 1372 aa11.56□□□□□ -0.56
CYLD-204ENST00000562884 ERVV-1B6SEH8 477 aa11.56□□□□□ -0.56
CYLD-204ENST00000562884 BRCA1P38398 1863 aaKnown RBP11.56□□□□□ -0.56
CYLD-204ENST00000562884 CCDC184Q52MB2 194 aa11.56□□□□□ -0.56
CYLD-204ENST00000562884 KIF6Q6ZMV9 814 aa11.56□□□□□ -0.56
CYLD-204ENST00000562884 ARFGEF1Q9Y6D6 1849 aa11.56□□□□□ -0.56
CYLD-204ENST00000562884 NPHP1O15259 732 aa11.55□□□□□ -0.56
CYLD-204ENST00000562884 ZNF853P0CG23 659 aa11.55□□□□□ -0.56
CYLD-204ENST00000562884 EIF2S2P20042 333 aaKnown RBP11.55□□□□□ -0.56
CYLD-204ENST00000562884 TBC1D9BQ66K14 1250 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms