RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
CDH11-205ENST00000562882 TJP1Q07157 1748 aa16.5■□□□□ 0.23
CDH11-205ENST00000562882 C5P01031 1676 aa16.5■□□□□ 0.23
CDH11-205ENST00000562882 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
CDH11-205ENST00000562882 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
CDH11-205ENST00000562882 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
CDH11-205ENST00000562882 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
CDH11-205ENST00000562882 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
CDH11-205ENST00000562882 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
CDH11-205ENST00000562882 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
CDH11-205ENST00000562882 STK32BQ9NY57 414 aa16.48■□□□□ 0.23
CDH11-205ENST00000562882 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
CDH11-205ENST00000562882 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
CDH11-205ENST00000562882 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
CDH11-205ENST00000562882 TSPYL6Q8N831 410 aa16.47■□□□□ 0.23
CDH11-205ENST00000562882 AK7Q96M32 723 aa16.47■□□□□ 0.23
CDH11-205ENST00000562882 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
CDH11-205ENST00000562882 RPS6KA4O75676 772 aa16.46■□□□□ 0.23
CDH11-205ENST00000562882 A1BGP04217 495 aa16.46■□□□□ 0.23
CDH11-205ENST00000562882 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
CDH11-205ENST00000562882 ZNF827Q17R98 1081 aa16.46■□□□□ 0.23
CDH11-205ENST00000562882 GNPATO15228 680 aa16.45■□□□□ 0.22
CDH11-205ENST00000562882 VAMP4O75379 141 aa16.45■□□□□ 0.22
CDH11-205ENST00000562882 YTHDC1Q96MU7 727 aaKnown RBP16.45■□□□□ 0.22
CDH11-205ENST00000562882 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
CDH11-205ENST00000562882 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
CDH11-205ENST00000562882 SSFA2P28290 1259 aa16.44■□□□□ 0.22
CDH11-205ENST00000562882 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
CDH11-205ENST00000562882 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
CDH11-205ENST00000562882 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
CDH11-205ENST00000562882 ZBTB1Q9Y2K1 713 aa16.44■□□□□ 0.22
CDH11-205ENST00000562882 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
CDH11-205ENST00000562882 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
CDH11-205ENST00000562882 ADRA2BP18089 450 aa16.43■□□□□ 0.22
CDH11-205ENST00000562882 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
CDH11-205ENST00000562882 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
CDH11-205ENST00000562882 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
CDH11-205ENST00000562882 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
CDH11-205ENST00000562882 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
CDH11-205ENST00000562882 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
CDH11-205ENST00000562882 MYH14Q7Z406 1995 aaKnown RBP16.43■□□□□ 0.22
CDH11-205ENST00000562882 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
CDH11-205ENST00000562882 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
CDH11-205ENST00000562882 PDIA6Q15084 440 aa16.42■□□□□ 0.22
CDH11-205ENST00000562882 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
CDH11-205ENST00000562882 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDH11-205ENST00000562882 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
CDH11-205ENST00000562882 QSER1Q2KHR3 1735 aa16.42■□□□□ 0.22
CDH11-205ENST00000562882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.41■□□□□ 0.22
CDH11-205ENST00000562882 R3HDM1Q15032 1099 aaKnown RBP16.41■□□□□ 0.22
CDH11-205ENST00000562882 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
CDH11-205ENST00000562882 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
CDH11-205ENST00000562882 A0A087WZG4 1122 aa16.4■□□□□ 0.22
CDH11-205ENST00000562882 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
CDH11-205ENST00000562882 ARHGEF1Q92888 912 aaKnown RBP16.4■□□□□ 0.22
CDH11-205ENST00000562882 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
CDH11-205ENST00000562882 PNPLA7Q6ZV29 1317 aa16.4■□□□□ 0.22
CDH11-205ENST00000562882 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.22
CDH11-205ENST00000562882 MYL6BP14649 208 aa16.39■□□□□ 0.21
CDH11-205ENST00000562882 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
CDH11-205ENST00000562882 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
CDH11-205ENST00000562882 COL23A1Q86Y22 540 aaPredicted RBP16.39■□□□□ 0.21
CDH11-205ENST00000562882 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
CDH11-205ENST00000562882 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
CDH11-205ENST00000562882 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
CDH11-205ENST00000562882 PSDA5PKW4 1024 aaPredicted RBP16.38■□□□□ 0.21
CDH11-205ENST00000562882 PHF14O94880 888 aa16.38■□□□□ 0.21
CDH11-205ENST00000562882 RFC4P35249 363 aa16.38■□□□□ 0.21
CDH11-205ENST00000562882 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
CDH11-205ENST00000562882 PDGFDQ9GZP0 370 aaPredicted RBP16.38■□□□□ 0.21
CDH11-205ENST00000562882 COL15A1P39059 1388 aa16.38■□□□□ 0.21
CDH11-205ENST00000562882 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
CDH11-205ENST00000562882 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
CDH11-205ENST00000562882 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
CDH11-205ENST00000562882 ALDH1L2Q3SY69 923 aa16.36■□□□□ 0.21
CDH11-205ENST00000562882 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
CDH11-205ENST00000562882 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
CDH11-205ENST00000562882 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
CDH11-205ENST00000562882 MSH5O43196 834 aa16.35■□□□□ 0.21
CDH11-205ENST00000562882 ZPR1O75312 459 aa16.35■□□□□ 0.21
CDH11-205ENST00000562882 ANXA1P04083 346 aa16.35■□□□□ 0.21
CDH11-205ENST00000562882 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
CDH11-205ENST00000562882 LRP5O75197 1615 aa16.34■□□□□ 0.21
CDH11-205ENST00000562882 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
CDH11-205ENST00000562882 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
CDH11-205ENST00000562882 RGL2O15211 777 aa16.34■□□□□ 0.21
CDH11-205ENST00000562882 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
CDH11-205ENST00000562882 ARXQ96QS3 562 aa16.34■□□□□ 0.21
CDH11-205ENST00000562882 SGIP1Q9BQI5 828 aa16.34■□□□□ 0.21
CDH11-205ENST00000562882 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
CDH11-205ENST00000562882 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
CDH11-205ENST00000562882 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
CDH11-205ENST00000562882 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
CDH11-205ENST00000562882 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.2
CDH11-205ENST00000562882 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.2
CDH11-205ENST00000562882 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
CDH11-205ENST00000562882 CACNA1FO60840 1977 aa16.32■□□□□ 0.2
CDH11-205ENST00000562882 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
CDH11-205ENST00000562882 GYS1P13807 737 aa16.32■□□□□ 0.2
CDH11-205ENST00000562882 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms