RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 EML3Q32P44 896 aa10.75□□□□□ -0.69
KARS-203ENST00000562875 BCORL1Q5H9F3 1711 aa10.75□□□□□ -0.69
KARS-203ENST00000562875 LAMC1P11047 1609 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 LZTS3O60299 673 aaPredicted RBP10.74□□□□□ -0.69
KARS-203ENST00000562875 PPP1R26Q5T8A7 1209 aaPredicted RBP10.74□□□□□ -0.69
KARS-203ENST00000562875 PBXIP1Q96AQ6 731 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 TMPRSS4Q9NRS4 437 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 KTN1Q86UP2 1357 aaKnown RBP10.74□□□□□ -0.69
KARS-203ENST00000562875 USP47Q96K76 1375 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 UHRF1BP1Q6BDS2 1440 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 SPATA31E1Q6ZUB1 1445 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 CCDC141Q6ZP82 1450 aa10.74□□□□□ -0.69
KARS-203ENST00000562875 UNC13BO14795 1591 aa10.73□□□□□ -0.69
KARS-203ENST00000562875 CDCA8Q53HL2 280 aa10.73□□□□□ -0.69
KARS-203ENST00000562875 PPP4R2Q9NY27 417 aa10.73□□□□□ -0.69
KARS-203ENST00000562875 KIF7Q2M1P5 1343 aa10.73□□□□□ -0.69
KARS-203ENST00000562875 SMPD1P17405 629 aa10.72□□□□□ -0.69
KARS-203ENST00000562875 FAM9BQ8IZU0 186 aa10.72□□□□□ -0.69
KARS-203ENST00000562875 VRTNQ9H8Y1 702 aa10.72□□□□□ -0.69
KARS-203ENST00000562875 ZNF644Q9H582 1327 aaPredicted RBP10.72□□□□□ -0.69
KARS-203ENST00000562875 PLXNC1O60486 1568 aa10.72□□□□□ -0.69
KARS-203ENST00000562875 TRPM1Q7Z4N2 1603 aa10.72□□□□□ -0.69
KARS-203ENST00000562875 USP4Q13107 963 aa10.71□□□□□ -0.69
KARS-203ENST00000562875 PLEKHH2Q8IVE3 1493 aa10.71□□□□□ -0.69
KARS-203ENST00000562875 SAMD9LQ8IVG5 1584 aa10.71□□□□□ -0.69
KARS-203ENST00000562875 ZNF784Q8NCA9 323 aaPredicted RBP10.71□□□□□ -0.69
KARS-203ENST00000562875 CYLDQ9NQC7 956 aa10.71□□□□□ -0.69
KARS-203ENST00000562875 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
KARS-203ENST00000562875 MKRN1Q9UHC7 482 aaKnown RBP10.71□□□□□ -0.69
KARS-203ENST00000562875 NOD1Q9Y239 953 aa10.71□□□□□ -0.69
KARS-203ENST00000562875 EMILIN1Q9Y6C2 1016 aa10.71□□□□□ -0.69
KARS-203ENST00000562875 SCTRP47872 440 aa10.7□□□□□ -0.7
KARS-203ENST00000562875 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
KARS-203ENST00000562875 NBPF8Q3BBV2 869 aa10.7□□□□□ -0.7
KARS-203ENST00000562875 ESF1Q9H501 851 aaKnown RBP10.7□□□□□ -0.7
KARS-203ENST00000562875 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
KARS-203ENST00000562875 ATP10BO94823 1461 aa10.69□□□□□ -0.7
KARS-203ENST00000562875 NUP155O75694 1391 aa10.69□□□□□ -0.7
KARS-203ENST00000562875 KIF15Q9NS87 1388 aa10.69□□□□□ -0.7
KARS-203ENST00000562875 MYCP01106 439 aaPredicted RBP10.69□□□□□ -0.7
KARS-203ENST00000562875 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
KARS-203ENST00000562875 SIRT1Q96EB6 747 aa10.69□□□□□ -0.7
KARS-203ENST00000562875 RBM19Q9Y4C8 960 aaKnown RBP10.69□□□□□ -0.7
KARS-203ENST00000562875 FAM135AQ9P2D6 1515 aa10.68□□□□□ -0.7
KARS-203ENST00000562875 ATP5J2-PTCD1G3V325 749 aa10.68□□□□□ -0.7
KARS-203ENST00000562875 ERVK-9P63128 1117 aa10.68□□□□□ -0.7
KARS-203ENST00000562875 ZNF326Q5BKZ1 582 aaKnown RBP10.68□□□□□ -0.7
KARS-203ENST00000562875 ARHGAP5Q13017 1502 aa10.68□□□□□ -0.7
KARS-203ENST00000562875 SMG6Q86US8 1419 aaKnown RBP10.67□□□□□ -0.7
KARS-203ENST00000562875 SHROOM2Q13796 1616 aa10.67□□□□□ -0.7
KARS-203ENST00000562875 WDR4P57081 412 aaKnown RBP10.67□□□□□ -0.7
KARS-203ENST00000562875 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
KARS-203ENST00000562875 HPS1Q92902 700 aa10.67□□□□□ -0.7
KARS-203ENST00000562875 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
KARS-203ENST00000562875 PTPRGP23470 1445 aa10.67□□□□□ -0.7
KARS-203ENST00000562875 FAM187AA6NFU0 413 aa10.66□□□□□ -0.7
KARS-203ENST00000562875 LILRA1O75019 489 aa10.66□□□□□ -0.7
KARS-203ENST00000562875 ZIC2O95409 532 aaPredicted RBP10.66□□□□□ -0.7
KARS-203ENST00000562875 RASA1P20936 1047 aa10.66□□□□□ -0.7
KARS-203ENST00000562875 GTF2IP78347 998 aa10.66□□□□□ -0.7
KARS-203ENST00000562875 ITPKCQ96DU7 683 aa10.66□□□□□ -0.7
KARS-203ENST00000562875 FANCIQ9NVI1 1328 aa10.65□□□□□ -0.7
KARS-203ENST00000562875 ATP1A2P50993 1020 aa10.65□□□□□ -0.7
KARS-203ENST00000562875 LARP1Q6PKG0 1096 aaKnown RBP10.65□□□□□ -0.7
KARS-203ENST00000562875 OGFOD1Q8N543 542 aa10.65□□□□□ -0.7
KARS-203ENST00000562875 KLF16Q9BXK1 252 aaPredicted RBP10.65□□□□□ -0.7
KARS-203ENST00000562875 CARD11Q9BXL7 1154 aa10.65□□□□□ -0.7
KARS-203ENST00000562875 CCDC144AA2RUR9 1427 aa10.65□□□□□ -0.7
KARS-203ENST00000562875 SYCP2Q9BX26 1530 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 DUOX2Q9NRD8 1548 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 GFRA3O60609 400 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 ATG7O95352 703 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 TIMP2P16035 220 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
KARS-203ENST00000562875 CLDN10P78369 228 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 RALBP1Q15311 655 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 DNAAF2Q9NVR5 837 aaKnown RBP10.64□□□□□ -0.71
KARS-203ENST00000562875 CEP152O94986 1710 aa10.64□□□□□ -0.71
KARS-203ENST00000562875 USP17L15C9J2P7 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L13C9JLJ4 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 C11orf95C9JLR9 678 aaPredicted RBP10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L12C9JPN9 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L11C9JVI0 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L21D6R901 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L18D6R9N7 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 PSME1Q06323 249 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
KARS-203ENST00000562875 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 ARXQ96QS3 562 aa10.63□□□□□ -0.71
KARS-203ENST00000562875 PCDHGA11Q9Y5H2 935 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms