RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 DKK1O94907 266 aa9.53□□□□□ -0.88
CHD9-206ENST00000562791 TXLNAP40222 546 aa9.53□□□□□ -0.88
CHD9-206ENST00000562791 ATP1A2P50993 1020 aa9.53□□□□□ -0.88
CHD9-206ENST00000562791 SLC9A9Q8IVB4 645 aa9.53□□□□□ -0.88
CHD9-206ENST00000562791 ZNF594Q96JF6 807 aaPredicted RBP9.53□□□□□ -0.88
CHD9-206ENST00000562791 CALR3Q96L12 384 aaKnown RBP9.53□□□□□ -0.88
CHD9-206ENST00000562791 CFHR5Q9BXR6 569 aa9.53□□□□□ -0.88
CHD9-206ENST00000562791 HCN2Q9UL51 889 aa9.53□□□□□ -0.88
CHD9-206ENST00000562791 BNIP3LO60238 219 aa9.52□□□□□ -0.89
CHD9-206ENST00000562791 NBPF1Q3BBV0 1214 aa9.52□□□□□ -0.89
CHD9-206ENST00000562791 SH3PXD2AQ5TCZ1 1133 aa9.52□□□□□ -0.89
CHD9-206ENST00000562791 C1orf216Q8TAB5 229 aa9.52□□□□□ -0.89
CHD9-206ENST00000562791 SIX5Q8N196 739 aa9.51□□□□□ -0.89
CHD9-206ENST00000562791 ZCCHC2Q9C0B9 1178 aaKnown RBP9.51□□□□□ -0.89
CHD9-206ENST00000562791 ZDHHC3Q9NYG2 299 aa9.51□□□□□ -0.89
CHD9-206ENST00000562791 ATXN7L1Q9ULK2 861 aaPredicted RBP9.51□□□□□ -0.89
CHD9-206ENST00000562791 A0A1W2PNR3 127 aa9.5□□□□□ -0.89
CHD9-206ENST00000562791 SFI1A8K8P3 1242 aa9.5□□□□□ -0.89
CHD9-206ENST00000562791 MAP3K10Q02779 954 aa9.5□□□□□ -0.89
CHD9-206ENST00000562791 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
CHD9-206ENST00000562791 KLRG1Q96E93 195 aa9.5□□□□□ -0.89
CHD9-206ENST00000562791 PPP1R12CQ9BZL4 782 aa9.5□□□□□ -0.89
CHD9-206ENST00000562791 PHF24Q9UPV7 400 aa9.5□□□□□ -0.89
CHD9-206ENST00000562791 C2CD2LO14523 706 aa9.49□□□□□ -0.89
CHD9-206ENST00000562791 FGFR3P22607 806 aa9.49□□□□□ -0.89
CHD9-206ENST00000562791 ARSJQ5FYB0 599 aaPredicted RBP9.49□□□□□ -0.89
CHD9-206ENST00000562791 TSEN2Q8NCE0 465 aaKnown RBP9.49□□□□□ -0.89
CHD9-206ENST00000562791 L3MBTL2Q969R5 705 aa9.49□□□□□ -0.89
CHD9-206ENST00000562791 ZIC5Q96T25 663 aa9.49□□□□□ -0.89
CHD9-206ENST00000562791 TSPAN10Q9H1Z9 355 aaPredicted RBP9.49□□□□□ -0.89
CHD9-206ENST00000562791 DCDC2BA2VCK2 349 aa9.48□□□□□ -0.89
CHD9-206ENST00000562791 BCRP11274 1271 aa9.48□□□□□ -0.89
CHD9-206ENST00000562791 TATP17735 454 aaPredicted RBP9.48□□□□□ -0.89
CHD9-206ENST00000562791 RASA1P20936 1047 aa9.48□□□□□ -0.89
CHD9-206ENST00000562791 NOS2P35228 1153 aa9.48□□□□□ -0.89
CHD9-206ENST00000562791 CTBSQ01459 385 aa9.48□□□□□ -0.89
CHD9-206ENST00000562791 KCNMA1Q12791 1236 aa9.48□□□□□ -0.89
CHD9-206ENST00000562791 TEAD4Q15561 434 aa9.48□□□□□ -0.89
CHD9-206ENST00000562791 NLRP8Q86W28 1048 aa9.48□□□□□ -0.89
CHD9-206ENST00000562791 MAP2K3P46734 347 aa9.47□□□□□ -0.89
CHD9-206ENST00000562791 CRTC2Q53ET0 693 aaPredicted RBP9.47□□□□□ -0.89
CHD9-206ENST00000562791 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
CHD9-206ENST00000562791 C1orf229Q6ZS94 237 aaPredicted RBP9.47□□□□□ -0.89
CHD9-206ENST00000562791 OXCT2Q9BYC2 517 aaPredicted RBP9.47□□□□□ -0.89
CHD9-206ENST00000562791 ZNF777Q9ULD5 760 aaPredicted RBP9.47□□□□□ -0.89
CHD9-206ENST00000562791 NSFL1CQ9UNZ2 370 aaKnown RBP9.47□□□□□ -0.89
CHD9-206ENST00000562791 PCDHGC4Q9Y5F7 938 aa9.47□□□□□ -0.89
CHD9-206ENST00000562791 M0R2N6 131 aa9.46□□□□□ -0.9
CHD9-206ENST00000562791 EML1O00423 815 aa9.46□□□□□ -0.9
CHD9-206ENST00000562791 FIGNL1Q6PIW4 674 aa9.46□□□□□ -0.9
CHD9-206ENST00000562791 ATXN7O15265 892 aaPredicted RBP9.45□□□□□ -0.9
CHD9-206ENST00000562791 OIP5O43482 229 aa9.45□□□□□ -0.9
CHD9-206ENST00000562791 BMP4P12644 408 aa9.45□□□□□ -0.9
CHD9-206ENST00000562791 C7orf43Q8WVR3 580 aa9.45□□□□□ -0.9
CHD9-206ENST00000562791 ZNF232Q9UNY5 417 aa9.45□□□□□ -0.9
CHD9-206ENST00000562791 SERTM1A2A2V5 107 aa9.44□□□□□ -0.9
CHD9-206ENST00000562791 C21orf2O43822 256 aa9.44□□□□□ -0.9
CHD9-206ENST00000562791 MAPTP10636 758 aaKnown RBP9.44□□□□□ -0.9
CHD9-206ENST00000562791 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
CHD9-206ENST00000562791 MARSP56192 900 aaKnown RBP9.44□□□□□ -0.9
CHD9-206ENST00000562791 PSMA6P60900 246 aaKnown RBP9.44□□□□□ -0.9
CHD9-206ENST00000562791 TNP2Q05952 138 aa9.44□□□□□ -0.9
CHD9-206ENST00000562791 PTK7Q13308 1070 aa9.44□□□□□ -0.9
CHD9-206ENST00000562791 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
CHD9-206ENST00000562791 POTEAQ6S8J7 498 aa9.44□□□□□ -0.9
CHD9-206ENST00000562791 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
CHD9-206ENST00000562791 SHISA8B8ZZ34 492 aa9.43□□□□□ -0.9
CHD9-206ENST00000562791 RNF225M0QZC1 329 aaPredicted RBP9.43□□□□□ -0.9
CHD9-206ENST00000562791 KHNYNO15037 678 aaKnown RBP9.43□□□□□ -0.9
CHD9-206ENST00000562791 CD33P20138 364 aa9.43□□□□□ -0.9
CHD9-206ENST00000562791 USP17L15C9J2P7 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L10C9JJH3 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L13C9JLJ4 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L12C9JPN9 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L11C9JVI0 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L21D6R901 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L18D6R9N7 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L22D6RA61 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L17D6RBQ6 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L19D6RCP7 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L20D6RJB6 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 LGR5O75473 907 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 FAM157BP0CG42 384 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 IRS1P35568 1242 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 RASSF7Q02833 373 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 USP17L24Q0WX57 530 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 NEDD1Q8NHV4 660 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 STRN4Q9NRL3 753 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 ENAMQ9NRM1 1142 aa9.42□□□□□ -0.9
CHD9-206ENST00000562791 CNTNAP5Q8WYK1 1306 aa9.41□□□□□ -0.9
CHD9-206ENST00000562791 SEC13P55735 322 aa9.41□□□□□ -0.9
CHD9-206ENST00000562791 DPYDQ12882 1025 aa9.41□□□□□ -0.9
CHD9-206ENST00000562791 SAMD5Q5TGI4 173 aa9.41□□□□□ -0.9
CHD9-206ENST00000562791 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
CHD9-206ENST00000562791 LRRC69Q6ZNQ3 347 aa9.41□□□□□ -0.9
CHD9-206ENST00000562791 LRRC4BQ9NT99 713 aa9.41□□□□□ -0.9
CHD9-206ENST00000562791 GGA1Q9UJY5 639 aa9.41□□□□□ -0.9
CHD9-206ENST00000562791 GJA3Q9Y6H8 435 aa9.41□□□□□ -0.9
CHD9-206ENST00000562791 FAM196BA6NMK8 535 aa9.4□□□□□ -0.9
CHD9-206ENST00000562791 EFSO43281 561 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms