RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
CCNDBP1-203ENST00000562553 MIS18AQ9NYP9 233 aa20.3■□□□□ 0.84
CCNDBP1-203ENST00000562553 ADRA2BP18089 450 aa20.29■□□□□ 0.84
CCNDBP1-203ENST00000562553 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
CCNDBP1-203ENST00000562553 ZBTB1Q9Y2K1 713 aa20.29■□□□□ 0.84
CCNDBP1-203ENST00000562553 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
CCNDBP1-203ENST00000562553 NEUROD2Q15784 382 aa20.27■□□□□ 0.84
CCNDBP1-203ENST00000562553 PRAMEF22A3QJZ6 481 aa20.26■□□□□ 0.83
CCNDBP1-203ENST00000562553 RFC4P35249 363 aa20.26■□□□□ 0.83
CCNDBP1-203ENST00000562553 SRP68Q9UHB9 627 aaKnown RBP20.26■□□□□ 0.83
CCNDBP1-203ENST00000562553 KLHL34Q8N239 644 aa20.25■□□□□ 0.83
CCNDBP1-203ENST00000562553 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
CCNDBP1-203ENST00000562553 GOLGB1Q14789 3259 aaKnown RBP20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 COL15A1P39059 1388 aa20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 STARD3NLO95772 234 aa20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 GYS1P13807 737 aa20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 CANXP27824 592 aaKnown RBP20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 GPR162Q16538 588 aa20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 MRS2Q9HD23 443 aa20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 USP42Q9H9J4 1324 aaKnown RBP20.24■□□□□ 0.83
CCNDBP1-203ENST00000562553 LMOD3Q0VAK6 560 aa20.23■□□□□ 0.83
CCNDBP1-203ENST00000562553 ZNF784Q8NCA9 323 aaPredicted RBP20.23■□□□□ 0.83
CCNDBP1-203ENST00000562553 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
CCNDBP1-203ENST00000562553 TEX13AQ9BXU3 409 aaPredicted RBP20.23■□□□□ 0.83
CCNDBP1-203ENST00000562553 A1BGP04217 495 aa20.22■□□□□ 0.83
CCNDBP1-203ENST00000562553 NLGN2Q8NFZ4 835 aa20.22■□□□□ 0.83
CCNDBP1-203ENST00000562553 APAF1O14727 1248 aa20.21■□□□□ 0.83
CCNDBP1-203ENST00000562553 MMP10P09238 476 aa20.21■□□□□ 0.83
CCNDBP1-203ENST00000562553 SNRPA1P09661 255 aaKnown RBP20.21■□□□□ 0.83
CCNDBP1-203ENST00000562553 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
CCNDBP1-203ENST00000562553 EIF5P55010 431 aaKnown RBP20.2■□□□□ 0.82
CCNDBP1-203ENST00000562553 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
CCNDBP1-203ENST00000562553 FKBP8Q14318 412 aa20.19■□□□□ 0.82
CCNDBP1-203ENST00000562553 USPL1Q5W0Q7 1092 aa20.19■□□□□ 0.82
CCNDBP1-203ENST00000562553 NLGN1Q8N2Q7 840 aa20.19■□□□□ 0.82
CCNDBP1-203ENST00000562553 TSPYL4Q9UJ04 414 aa20.19■□□□□ 0.82
CCNDBP1-203ENST00000562553 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
CCNDBP1-203ENST00000562553 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
CCNDBP1-203ENST00000562553 ZNF330Q9Y3S2 320 aaPredicted RBP20.18■□□□□ 0.82
CCNDBP1-203ENST00000562553 ZPR1O75312 459 aa20.17■□□□□ 0.82
CCNDBP1-203ENST00000562553 BCL2L12Q9HB09 334 aa20.17■□□□□ 0.82
CCNDBP1-203ENST00000562553 NARFQ9UHQ1 456 aa20.17■□□□□ 0.82
CCNDBP1-203ENST00000562553 KIF13BQ9NQT8 1826 aa20.17■□□□□ 0.82
CCNDBP1-203ENST00000562553 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
CCNDBP1-203ENST00000562553 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
CCNDBP1-203ENST00000562553 GRIN3BO60391 1043 aa20.16■□□□□ 0.82
CCNDBP1-203ENST00000562553 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
CCNDBP1-203ENST00000562553 IL6STP40189 918 aaPredicted RBP20.16■□□□□ 0.82
CCNDBP1-203ENST00000562553 NBPF26B4DH59 902 aa20.15■□□□□ 0.82
CCNDBP1-203ENST00000562553 NBPF10Q6P3W6 841 aaKnown RBP20.15■□□□□ 0.82
CCNDBP1-203ENST00000562553 NBPF15Q8N660 670 aa20.15■□□□□ 0.82
CCNDBP1-203ENST00000562553 AFDNP55196 1824 aaKnown RBP20.14■□□□□ 0.81
CCNDBP1-203ENST00000562553 DDR1Q08345 913 aa20.14■□□□□ 0.81
CCNDBP1-203ENST00000562553 BABAM1Q9NWV8 329 aa20.14■□□□□ 0.81
CCNDBP1-203ENST00000562553 LAS1LQ9Y4W2 734 aaKnown RBP20.14■□□□□ 0.81
CCNDBP1-203ENST00000562553 KIAA1551Q9HCM1 1747 aa20.13■□□□□ 0.81
CCNDBP1-203ENST00000562553 A0A087WZG4 1122 aa20.13■□□□□ 0.81
CCNDBP1-203ENST00000562553 CHL1O00533 1208 aa20.13■□□□□ 0.81
CCNDBP1-203ENST00000562553 YBX3P16989 372 aaKnown RBP eCLIP20.13■□□□□ 0.811e-6■□□□□ 9
CCNDBP1-203ENST00000562553 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
CCNDBP1-203ENST00000562553 TBC1D2BQ9UPU7 963 aa20.13■□□□□ 0.81
CCNDBP1-203ENST00000562553 C10orf71Q711Q0 1435 aa20.12■□□□□ 0.81
CCNDBP1-203ENST00000562553 TM4SF1P30408 202 aa20.12■□□□□ 0.81
CCNDBP1-203ENST00000562553 PARP3Q9Y6F1 533 aa20.12■□□□□ 0.81
CCNDBP1-203ENST00000562553 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
CCNDBP1-203ENST00000562553 NFIXQ14938 502 aa20.11■□□□□ 0.81
CCNDBP1-203ENST00000562553 KRT24Q2M2I5 525 aa20.11■□□□□ 0.81
CCNDBP1-203ENST00000562553 NRXN2Q9P2S2 1712 aa20.1■□□□□ 0.81
CCNDBP1-203ENST00000562553 POLRMTO00411 1230 aaKnown RBP20.1■□□□□ 0.81
CCNDBP1-203ENST00000562553 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
CCNDBP1-203ENST00000562553 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
CCNDBP1-203ENST00000562553 CFAP44Q96MT7 982 aa20.09■□□□□ 0.81
CCNDBP1-203ENST00000562553 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.81
CCNDBP1-203ENST00000562553 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
CCNDBP1-203ENST00000562553 PXDNLA1KZ92 1463 aa20.07■□□□□ 0.8
CCNDBP1-203ENST00000562553 ZNF853P0CG23 659 aa20.07■□□□□ 0.8
CCNDBP1-203ENST00000562553 TBC1D9BQ66K14 1250 aa20.07■□□□□ 0.8
CCNDBP1-203ENST00000562553 BICDL1Q6ZP65 573 aa20.07■□□□□ 0.8
CCNDBP1-203ENST00000562553 MBIPQ9NS73 344 aa20.07■□□□□ 0.8
CCNDBP1-203ENST00000562553 EIF2S2P20042 333 aaKnown RBP20.06■□□□□ 0.8
CCNDBP1-203ENST00000562553 NGEFQ8N5V2 710 aa20.06■□□□□ 0.8
CCNDBP1-203ENST00000562553 IFT57Q9NWB7 429 aa20.06■□□□□ 0.8
CCNDBP1-203ENST00000562553 WWC3Q9ULE0 1092 aa20.06■□□□□ 0.8
CCNDBP1-203ENST00000562553 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
CCNDBP1-203ENST00000562553 MYL6BP14649 208 aa20.05■□□□□ 0.8
CCNDBP1-203ENST00000562553 NUP98P52948 1817 aa20.04■□□□□ 0.8
CCNDBP1-203ENST00000562553 PDIA6Q15084 440 aa20.04■□□□□ 0.8
CCNDBP1-203ENST00000562553 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
CCNDBP1-203ENST00000562553 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
CCNDBP1-203ENST00000562553 NECTIN2Q92692 538 aa20.04■□□□□ 0.8
CCNDBP1-203ENST00000562553 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
CCNDBP1-203ENST00000562553 ANXA1P04083 346 aa20.03■□□□□ 0.8
CCNDBP1-203ENST00000562553 SERPINB2P05120 415 aa20.03■□□□□ 0.8
CCNDBP1-203ENST00000562553 C1QTNF8P60827 252 aa20.03■□□□□ 0.8
CCNDBP1-203ENST00000562553 GNAI1P63096 354 aa20.03■□□□□ 0.8
CCNDBP1-203ENST00000562553 CALD1Q05682 793 aaKnown RBP20.03■□□□□ 0.8
CCNDBP1-203ENST00000562553 PROSER3Q2NL68 480 aa20.03■□□□□ 0.8
CCNDBP1-203ENST00000562553 SALL2Q9Y467 1007 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms