RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 FIGNL2A6NMB9 653 aa10.29□□□□□ -0.76
DENND4A-204ENST00000562028 LCE2BO14633 110 aa10.29□□□□□ -0.76
DENND4A-204ENST00000562028 NOS2P35228 1153 aa10.29□□□□□ -0.76
DENND4A-204ENST00000562028 FKBP5Q13451 457 aaPredicted RBP10.29□□□□□ -0.76
DENND4A-204ENST00000562028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.29□□□□□ -0.763e-6■■■■■ 26.9
DENND4A-204ENST00000562028 C4orf17Q53FE4 359 aa10.29□□□□□ -0.76
DENND4A-204ENST00000562028 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
DENND4A-204ENST00000562028 CHMP7Q8WUX9 453 aaPredicted RBP10.29□□□□□ -0.76
DENND4A-204ENST00000562028 DNMT3LQ9UJW3 386 aa10.29□□□□□ -0.76
DENND4A-204ENST00000562028 SERTM1A2A2V5 107 aa10.28□□□□□ -0.76
DENND4A-204ENST00000562028 PATL2C9JE40 543 aaKnown RBP10.28□□□□□ -0.76
DENND4A-204ENST00000562028 MAN1A2O60476 641 aa10.28□□□□□ -0.76
DENND4A-204ENST00000562028 HIRAP54198 1017 aaPredicted RBP10.28□□□□□ -0.76
DENND4A-204ENST00000562028 POU4F2Q12837 409 aa10.28□□□□□ -0.76
DENND4A-204ENST00000562028 ZDHHC1Q8WTX9 485 aa10.28□□□□□ -0.76
DENND4A-204ENST00000562028 L3MBTL2Q969R5 705 aa10.28□□□□□ -0.76
DENND4A-204ENST00000562028 COL26A1Q96A83 441 aa10.28□□□□□ -0.76
DENND4A-204ENST00000562028 TRIM47Q96LD4 638 aa10.28□□□□□ -0.76
DENND4A-204ENST00000562028 EML1O00423 815 aa10.27□□□□□ -0.77
DENND4A-204ENST00000562028 PTCD1O75127 700 aaKnown RBP10.27□□□□□ -0.77
DENND4A-204ENST00000562028 KCNA1Q09470 495 aa10.27□□□□□ -0.77
DENND4A-204ENST00000562028 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.27□□□□□ -0.772e-6■■■■■ 149.1
DENND4A-204ENST00000562028 GMPR2Q9P2T1 348 aaKnown RBP10.27□□□□□ -0.77
DENND4A-204ENST00000562028 ARID4AP29374 1257 aaPredicted RBP10.26□□□□□ -0.77
DENND4A-204ENST00000562028 VTI1AQ96AJ9 217 aa10.26□□□□□ -0.77
DENND4A-204ENST00000562028 ZNF232Q9UNY5 417 aa10.26□□□□□ -0.77
DENND4A-204ENST00000562028 PLA2G4AP47712 749 aa10.25□□□□□ -0.77
DENND4A-204ENST00000562028 AEBP1Q8IUX7 1158 aa10.25□□□□□ -0.77
DENND4A-204ENST00000562028 MTMR7Q9Y216 660 aa10.25□□□□□ -0.77
DENND4A-204ENST00000562028 PHKA2P46019 1235 aa10.24□□□□□ -0.77
DENND4A-204ENST00000562028 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
DENND4A-204ENST00000562028 RHOQP17081 205 aa10.23□□□□□ -0.77
DENND4A-204ENST00000562028 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
DENND4A-204ENST00000562028 SH3PXD2AQ5TCZ1 1133 aa10.23□□□□□ -0.77
DENND4A-204ENST00000562028 TXNDC2Q86VQ3 553 aa10.23□□□□□ -0.77
DENND4A-204ENST00000562028 TIMMDC1Q9NPL8 285 aa10.23□□□□□ -0.77
DENND4A-204ENST00000562028 ZDHHC3Q9NYG2 299 aa10.23□□□□□ -0.77
DENND4A-204ENST00000562028 GNEQ9Y223 722 aaKnown RBP10.23□□□□□ -0.77
DENND4A-204ENST00000562028 A0A1B0GTH6 734 aa10.22□□□□□ -0.77
DENND4A-204ENST00000562028 C1orf53Q5VUE5 145 aa10.22□□□□□ -0.77
DENND4A-204ENST00000562028 CCER1Q8TC90 406 aaPredicted RBP10.22□□□□□ -0.77
DENND4A-204ENST00000562028 MKNK1Q9BUB5 465 aa10.22□□□□□ -0.77
DENND4A-204ENST00000562028 SOBPA7XYQ1 873 aa10.21□□□□□ -0.77
DENND4A-204ENST00000562028 SCNN1AP37088 669 aa10.21□□□□□ -0.77
DENND4A-204ENST00000562028 ALDH16A1Q8IZ83 802 aa10.21□□□□□ -0.77
DENND4A-204ENST00000562028 AIDAQ96BJ3 306 aa10.21□□□□□ -0.77
DENND4A-204ENST00000562028 HCN4Q9Y3Q4 1203 aa10.21□□□□□ -0.77
DENND4A-204ENST00000562028 DYRK1BQ9Y463 629 aa10.21□□□□□ -0.77
DENND4A-204ENST00000562028 C11orf95C9JLR9 678 aaPredicted RBP10.2□□□□□ -0.78
DENND4A-204ENST00000562028 TXLNAP40222 546 aa10.2□□□□□ -0.78
DENND4A-204ENST00000562028 CAPN12Q6ZSI9 719 aa10.2□□□□□ -0.78
DENND4A-204ENST00000562028 SENP3-EIF4A1A0A087X0R7 540 aa10.19□□□□□ -0.78
DENND4A-204ENST00000562028 SNRPBP14678 240 aaKnown RBP10.19□□□□□ -0.78
DENND4A-204ENST00000562028 TATP17735 454 aaPredicted RBP10.19□□□□□ -0.78
DENND4A-204ENST00000562028 PTSQ03393 145 aa10.19□□□□□ -0.78
DENND4A-204ENST00000562028 MYO19Q96H55 970 aa10.19□□□□□ -0.78
DENND4A-204ENST00000562028 PHACTR1Q9C0D0 580 aa10.19□□□□□ -0.78
DENND4A-204ENST00000562028 SEPT3Q9UH03 358 aa10.19□□□□□ -0.78
DENND4A-204ENST00000562028 NAA30Q147X3 362 aaPredicted RBP10.18□□□□□ -0.78
DENND4A-204ENST00000562028 RTN1Q16799 776 aa10.18□□□□□ -0.78
DENND4A-204ENST00000562028 QTRT2Q9H974 415 aaKnown RBP10.18□□□□□ -0.78
DENND4A-204ENST00000562028 GPC6Q9Y625 555 aaPredicted RBP10.18□□□□□ -0.78
DENND4A-204ENST00000562028 ZBTB7CA1YPR0 619 aa10.17□□□□□ -0.78
DENND4A-204ENST00000562028 SLC35F4A4IF30 521 aa10.17□□□□□ -0.78
DENND4A-204ENST00000562028 F11P03951 625 aa10.17□□□□□ -0.78
DENND4A-204ENST00000562028 ATP4AP20648 1035 aa10.17□□□□□ -0.78
DENND4A-204ENST00000562028 MSX1P28360 303 aa10.17□□□□□ -0.78
DENND4A-204ENST00000562028 C16orf46Q6P387 395 aa10.17□□□□□ -0.78
DENND4A-204ENST00000562028 C7orf43Q8WVR3 580 aa10.17□□□□□ -0.78
DENND4A-204ENST00000562028 NGLY1Q96IV0 654 aa10.17□□□□□ -0.78
DENND4A-204ENST00000562028 COX20Q5RI15 118 aa10.16□□□□□ -0.78
DENND4A-204ENST00000562028 GTF3C2Q8WUA4 911 aaPredicted RBP10.16□□□□□ -0.78
DENND4A-204ENST00000562028 EGFL7Q9UHF1 273 aa10.16□□□□□ -0.78
DENND4A-204ENST00000562028 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
DENND4A-204ENST00000562028 POTECB2RU33 542 aa10.15□□□□□ -0.78
DENND4A-204ENST00000562028 SAP130Q9H0E3 1048 aa10.15□□□□□ -0.78
DENND4A-204ENST00000562028 SERPINB4P48594 390 aa10.14□□□□□ -0.79
DENND4A-204ENST00000562028 HIF1AQ16665 826 aa10.14□□□□□ -0.79
DENND4A-204ENST00000562028 CCDC155Q8N6L0 562 aa10.14□□□□□ -0.79
DENND4A-204ENST00000562028 RHPN1Q8TCX5 695 aa10.14□□□□□ -0.79
DENND4A-204ENST00000562028 HELQQ8TDG4 1101 aa10.14□□□□□ -0.79
DENND4A-204ENST00000562028 GAS2L1Q99501 681 aaPredicted RBP10.14□□□□□ -0.79
DENND4A-204ENST00000562028 CRISPLD1Q9H336 500 aa10.14□□□□□ -0.79
DENND4A-204ENST00000562028 LRFN2Q9ULH4 789 aa10.14□□□□□ -0.79
DENND4A-204ENST00000562028 C11orf91Q3C1V1 193 aa10.13□□□□□ -0.79
DENND4A-204ENST00000562028 ARSJQ5FYB0 599 aaPredicted RBP10.13□□□□□ -0.79
DENND4A-204ENST00000562028 BICDL1Q6ZP65 573 aa10.13□□□□□ -0.79
DENND4A-204ENST00000562028 ZIC5Q96T25 663 aa10.13□□□□□ -0.79
DENND4A-204ENST00000562028 GPAMQ9HCL2 828 aa10.13□□□□□ -0.79
DENND4A-204ENST00000562028 DNMT3AQ9Y6K1 912 aaPredicted RBP10.13□□□□□ -0.79
DENND4A-204ENST00000562028 ABL1P00519 1130 aa10.12□□□□□ -0.79
DENND4A-204ENST00000562028 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
DENND4A-204ENST00000562028 SF3B2Q13435 895 aaKnown RBP10.12□□□□□ -0.79
DENND4A-204ENST00000562028 PGBD3Q8N328 593 aa10.12□□□□□ -0.79
DENND4A-204ENST00000562028 ANKIB1Q9P2G1 1089 aa10.12□□□□□ -0.79
DENND4A-204ENST00000562028 FKBP4Q02790 459 aaKnown RBP eCLIP10.11□□□□□ -0.79
DENND4A-204ENST00000562028 DGKZQ13574 1117 aa10.11□□□□□ -0.79
DENND4A-204ENST00000562028 LBRQ14739 615 aaKnown RBP10.11□□□□□ -0.79
DENND4A-204ENST00000562028 STIM2Q9P246 746 aa10.11□□□□□ -0.79
DENND4A-204ENST00000562028 A0A1W2PNR3 127 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms