RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 TAF7Q15545 349 aaPredicted RBP31.52■■■□□ 2.64
CDR2-202ENST00000561630 GPR162Q16538 588 aa31.52■■■□□ 2.64
CDR2-202ENST00000561630 C4AP0C0L4 1744 aa31.52■■■□□ 2.64
CDR2-202ENST00000561630 FKBP8Q14318 412 aa31.5■■■□□ 2.63
CDR2-202ENST00000561630 COL15A1P39059 1388 aa31.5■■■□□ 2.63
CDR2-202ENST00000561630 ZPR1O75312 459 aa31.49■■■□□ 2.63
CDR2-202ENST00000561630 CANXP27824 592 aaKnown RBP31.49■■■□□ 2.63
CDR2-202ENST00000561630 YY1P25490 414 aa31.48■■■□□ 2.63
CDR2-202ENST00000561630 NARFQ9UHQ1 456 aa31.48■■■□□ 2.63
CDR2-202ENST00000561630 ZNF316A6NFI3 1004 aaPredicted RBP31.47■■■□□ 2.63
CDR2-202ENST00000561630 EIF5P55010 431 aaKnown RBP31.47■■■□□ 2.63
CDR2-202ENST00000561630 USPL1Q5W0Q7 1092 aa31.47■■■□□ 2.63
CDR2-202ENST00000561630 PELP1Q8IZL8 1130 aaKnown RBP31.47■■■□□ 2.63
CDR2-202ENST00000561630 PARP3Q9Y6F1 533 aa31.47■■■□□ 2.63
CDR2-202ENST00000561630 WDR43Q15061 677 aaKnown RBP eCLIP31.46■■■□□ 2.63
CDR2-202ENST00000561630 PNISRQ8TF01 805 aaKnown RBP31.45■■■□□ 2.63
CDR2-202ENST00000561630 SNRPA1P09661 255 aaKnown RBP31.44■■■□□ 2.62
CDR2-202ENST00000561630 THUMPD2Q9BTF0 503 aaKnown RBP31.44■■■□□ 2.62
CDR2-202ENST00000561630 MIS18AQ9NYP9 233 aa31.44■■■□□ 2.62
CDR2-202ENST00000561630 YBX3P16989 372 aaKnown RBP eCLIP31.43■■■□□ 2.62
CDR2-202ENST00000561630 RIPK4P57078 832 aa31.43■■■□□ 2.62
CDR2-202ENST00000561630 USP16Q9Y5T5 823 aa31.43■■■□□ 2.62
CDR2-202ENST00000561630 A0A087WZG4 1122 aa31.42■■■□□ 2.62
CDR2-202ENST00000561630 A1BGP04217 495 aa31.42■■■□□ 2.62
CDR2-202ENST00000561630 TM4SF1P30408 202 aa31.42■■■□□ 2.62
CDR2-202ENST00000561630 IL6STP40189 918 aaPredicted RBP31.42■■■□□ 2.62
CDR2-202ENST00000561630 TMPOP42166 694 aaKnown RBP31.42■■■□□ 2.62
CDR2-202ENST00000561630 DDR1Q08345 913 aa31.42■■■□□ 2.62
CDR2-202ENST00000561630 ADAMTS8Q9UP79 889 aa31.42■■■□□ 2.62
CDR2-202ENST00000561630 C10orf71Q711Q0 1435 aa31.41■■■□□ 2.62
CDR2-202ENST00000561630 PRAMEF22A3QJZ6 481 aa31.41■■■□□ 2.62
CDR2-202ENST00000561630 DLG5Q8TDM6 1919 aa31.4■■■□□ 2.62
CDR2-202ENST00000561630 CCDC146Q8IYE0 955 aa31.4■■■□□ 2.62
CDR2-202ENST00000561630 BCL2L12Q9HB09 334 aa31.4■■■□□ 2.62
CDR2-202ENST00000561630 GRIN3BO60391 1043 aa31.39■■■□□ 2.62
CDR2-202ENST00000561630 RUNDC1Q96C34 613 aa31.39■■■□□ 2.62
CDR2-202ENST00000561630 POLRMTO00411 1230 aaKnown RBP31.38■■■□□ 2.61
CDR2-202ENST00000561630 TGFB2P61812 414 aa31.38■■■□□ 2.61
CDR2-202ENST00000561630 LMOD3Q0VAK6 560 aa31.37■■■□□ 2.61
CDR2-202ENST00000561630 ZNF330Q9Y3S2 320 aaPredicted RBP31.37■■■□□ 2.61
CDR2-202ENST00000561630 NFIXQ14938 502 aa31.36■■■□□ 2.61
CDR2-202ENST00000561630 PXDNLA1KZ92 1463 aa31.35■■■□□ 2.61
CDR2-202ENST00000561630 RRP7AQ9Y3A4 280 aaKnown RBP31.35■■■□□ 2.61
CDR2-202ENST00000561630 EIF4A1P60842 406 aaKnown RBP31.34■■■□□ 2.61
CDR2-202ENST00000561630 NPM2Q86SE8 214 aaKnown RBP31.34■■■□□ 2.61
CDR2-202ENST00000561630 TBC1D2BQ9UPU7 963 aa31.34■■■□□ 2.61
CDR2-202ENST00000561630 GIGYF1O75420 1035 aaPredicted RBP31.32■■■□□ 2.6
CDR2-202ENST00000561630 KIF13BQ9NQT8 1826 aa31.32■■■□□ 2.6
CDR2-202ENST00000561630 A0A0G2JLW4 131 aa31.31■■■□□ 2.6
CDR2-202ENST00000561630 PIP4K2AP48426 406 aaPredicted RBP31.31■■■□□ 2.6
CDR2-202ENST00000561630 NEUROD2Q15784 382 aa31.31■■■□□ 2.6
CDR2-202ENST00000561630 BABAM1Q9NWV8 329 aa31.3■■■□□ 2.6
CDR2-202ENST00000561630 WWC3Q9ULE0 1092 aa31.3■■■□□ 2.6
CDR2-202ENST00000561630 KDM3BQ7LBC6 1761 aa31.3■■■□□ 2.6
CDR2-202ENST00000561630 NBPF26B4DH59 902 aa31.29■■■□□ 2.6
CDR2-202ENST00000561630 CAMTA2O94983 1202 aa31.29■■■□□ 2.6
CDR2-202ENST00000561630 DPEP1P16444 411 aa31.29■■■□□ 2.6
CDR2-202ENST00000561630 NBPF10Q6P3W6 841 aaKnown RBP31.29■■■□□ 2.6
CDR2-202ENST00000561630 NBPF15Q8N660 670 aa31.29■■■□□ 2.6
CDR2-202ENST00000561630 TSPYL4Q9UJ04 414 aa31.29■■■□□ 2.6
CDR2-202ENST00000561630 DZIP3Q86Y13 1208 aaKnown RBP31.28■■■□□ 2.6
CDR2-202ENST00000561630 TRIM35Q9UPQ4 493 aa31.28■■■□□ 2.6
CDR2-202ENST00000561630 SERPINB2P05120 415 aa31.27■■■□□ 2.6
CDR2-202ENST00000561630 TBC1D9BQ66K14 1250 aa31.26■■■□□ 2.59
CDR2-202ENST00000561630 BICDL1Q6ZP65 573 aa31.26■■■□□ 2.59
CDR2-202ENST00000561630 KIAA1551Q9HCM1 1747 aa31.26■■■□□ 2.59
CDR2-202ENST00000561630 KCNA3P22001 575 aa31.25■■■□□ 2.59
CDR2-202ENST00000561630 SCN7AQ01118 1682 aa31.24■■■□□ 2.59
CDR2-202ENST00000561630 CCDC184Q52MB2 194 aa31.23■■■□□ 2.59
CDR2-202ENST00000561630 CHD4Q14839 1912 aa31.22■■■□□ 2.59
CDR2-202ENST00000561630 ANP32CO43423 234 aa31.21■■■□□ 2.59
CDR2-202ENST00000561630 CLEC4GQ6UXB4 293 aa31.21■■■□□ 2.59
CDR2-202ENST00000561630 BCS1LQ9Y276 419 aa31.21■■■□□ 2.59
CDR2-202ENST00000561630 CHL1O00533 1208 aa31.2■■■□□ 2.59
CDR2-202ENST00000561630 RGL2O15211 777 aa31.2■■■□□ 2.59
CDR2-202ENST00000561630 ZNF784Q8NCA9 323 aaPredicted RBP31.2■■■□□ 2.59
CDR2-202ENST00000561630 CARMIL3Q8ND23 1372 aa31.19■■■□□ 2.58
CDR2-202ENST00000561630 NRXN2Q9P2S2 1712 aa31.19■■■□□ 2.58
CDR2-202ENST00000561630 APAF1O14727 1248 aa31.19■■■□□ 2.58
CDR2-202ENST00000561630 SETDB2Q96T68 719 aa31.19■■■□□ 2.58
CDR2-202ENST00000561630 PIM2Q9P1W9 311 aa31.19■■■□□ 2.58
CDR2-202ENST00000561630 N4BP2Q86UW6 1770 aaPredicted RBP31.19■■■□□ 2.58
CDR2-202ENST00000561630 LAMB4A4D0S4 1761 aa31.18■■■□□ 2.58
CDR2-202ENST00000561630 CHRNA5P30532 468 aa31.18■■■□□ 2.58
CDR2-202ENST00000561630 ZNF652Q9Y2D9 606 aa31.17■■■□□ 2.58
CDR2-202ENST00000561630 ERBB4Q15303 1308 aa31.15■■■□□ 2.58
CDR2-202ENST00000561630 DALRD3Q5D0E6 543 aaKnown RBP31.14■■■□□ 2.58
CDR2-202ENST00000561630 PRR5LQ6MZQ0 368 aa31.14■■■□□ 2.58
CDR2-202ENST00000561630 LAS1LQ9Y4W2 734 aaKnown RBP31.14■■■□□ 2.58
CDR2-202ENST00000561630 AFDNP55196 1824 aaKnown RBP31.14■■■□□ 2.58
CDR2-202ENST00000561630 BCORQ6W2J9 1755 aa31.13■■■□□ 2.57
CDR2-202ENST00000561630 NGEFQ8N5V2 710 aa31.12■■■□□ 2.57
CDR2-202ENST00000561630 CFAP44Q96MT7 982 aa31.12■■■□□ 2.57
CDR2-202ENST00000561630 MYL6BP14649 208 aa31.11■■■□□ 2.57
CDR2-202ENST00000561630 CNBD1Q8NA66 436 aa31.11■■■□□ 2.57
CDR2-202ENST00000561630 BRIP1Q9BX63 1249 aa31.11■■■□□ 2.57
CDR2-202ENST00000561630 MRS2Q9HD23 443 aa31.11■■■□□ 2.57
CDR2-202ENST00000561630 ERVV-1B6SEH8 477 aa31.1■■■□□ 2.57
CDR2-202ENST00000561630 EIF2S2P20042 333 aaKnown RBP31.1■■■□□ 2.57
CDR2-202ENST00000561630 HLFQ16534 295 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms